RNA–Protein interactions for RNA: ENST00000390360.3

TRBV6-4-201, Transcript of T cell receptor beta variable 6-4, humanhuman

APPRIS P1 BASIC

Gene TRBV6-4, Length 365 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4-201ENST00000390360 USP6P35125 1406 aa13.84□□□□□ -0.19
TRBV6-4-201ENST00000390360 HDGFL2Q7Z4V5 671 aaPredicted RBP13.84□□□□□ -0.19
TRBV6-4-201ENST00000390360 TERF2IPQ9NYB0 399 aa13.84□□□□□ -0.19
TRBV6-4-201ENST00000390360 TRPM3Q9HCF6 1732 aaPredicted RBP13.84□□□□□ -0.19
TRBV6-4-201ENST00000390360 PLEKHG5O94827 1062 aa13.83□□□□□ -0.2
TRBV6-4-201ENST00000390360 ABTB2Q8N961 1025 aa13.83□□□□□ -0.2
TRBV6-4-201ENST00000390360 C8orf37Q96NL8 207 aa13.83□□□□□ -0.2
TRBV6-4-201ENST00000390360 SLC12A5Q9H2X9 1139 aa13.83□□□□□ -0.2
TRBV6-4-201ENST00000390360 KTN1Q86UP2 1357 aaKnown RBP13.83□□□□□ -0.2
TRBV6-4-201ENST00000390360 CPSF1Q10570 1443 aaKnown RBP13.82□□□□□ -0.2
TRBV6-4-201ENST00000390360 ZNF772Q68DY9 489 aaPredicted RBP13.82□□□□□ -0.2
TRBV6-4-201ENST00000390360 CABLES1Q8TDN4 633 aa13.82□□□□□ -0.2
TRBV6-4-201ENST00000390360 NGLY1Q96IV0 654 aa13.82□□□□□ -0.2
TRBV6-4-201ENST00000390360 NLRP13Q86W25 1043 aa13.81□□□□□ -0.2
TRBV6-4-201ENST00000390360 ALS2Q96Q42 1657 aa13.81□□□□□ -0.2
TRBV6-4-201ENST00000390360 NUTM2GQ5VZR2 741 aa13.8□□□□□ -0.2
TRBV6-4-201ENST00000390360 RGS17Q9UGC6 210 aaPredicted RBP13.8□□□□□ -0.2
TRBV6-4-201ENST00000390360 TTC21BQ7Z4L5 1316 aa13.8□□□□□ -0.2
TRBV6-4-201ENST00000390360 TTC21AQ8NDW8 1320 aa13.8□□□□□ -0.2
TRBV6-4-201ENST00000390360 SSH2Q76I76 1423 aa13.8□□□□□ -0.2
TRBV6-4-201ENST00000390360 AFF2P51816 1311 aa13.79□□□□□ -0.2
TRBV6-4-201ENST00000390360 NLRP6P59044 892 aa13.78□□□□□ -0.2
TRBV6-4-201ENST00000390360 FNBP4Q8N3X1 1017 aaPredicted RBP13.78□□□□□ -0.2
TRBV6-4-201ENST00000390360 A0A1W2PP64 1363 aa13.78□□□□□ -0.2
TRBV6-4-201ENST00000390360 CD163L1Q9NR16 1453 aa13.78□□□□□ -0.2
TRBV6-4-201ENST00000390360 EDC4Q6P2E9 1401 aaKnown RBP13.77□□□□□ -0.21
TRBV6-4-201ENST00000390360 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.77□□□□□ -0.21
TRBV6-4-201ENST00000390360 ANKRD36BQ8N2N9 1353 aa13.77□□□□□ -0.21
TRBV6-4-201ENST00000390360 POLR3GLQ9BT43 218 aa13.77□□□□□ -0.21
TRBV6-4-201ENST00000390360 AKAP12Q02952 1782 aa13.76□□□□□ -0.21
TRBV6-4-201ENST00000390360 USP19O94966 1318 aa13.76□□□□□ -0.21
TRBV6-4-201ENST00000390360 USP21Q9UK80 565 aa13.76□□□□□ -0.21
TRBV6-4-201ENST00000390360 GCP02774 474 aa13.75□□□□□ -0.21
TRBV6-4-201ENST00000390360 POTEAQ6S8J7 498 aa13.75□□□□□ -0.21
TRBV6-4-201ENST00000390360 MON2Q7Z3U7 1717 aa13.74□□□□□ -0.21
TRBV6-4-201ENST00000390360 FAM83GA6ND36 823 aa13.74□□□□□ -0.21
TRBV6-4-201ENST00000390360 PRDM11Q9NQV5 511 aa13.74□□□□□ -0.21
TRBV6-4-201ENST00000390360 TRPC5Q9UL62 973 aaPredicted RBP13.74□□□□□ -0.21
TRBV6-4-201ENST00000390360 ABCA3Q99758 1704 aa13.73□□□□□ -0.21
TRBV6-4-201ENST00000390360 ZC3H6P61129 1189 aaKnown RBP13.73□□□□□ -0.21
TRBV6-4-201ENST00000390360 KCNH5Q8NCM2 988 aa13.73□□□□□ -0.21
TRBV6-4-201ENST00000390360 QTRT2Q9H974 415 aaKnown RBP13.73□□□□□ -0.21
TRBV6-4-201ENST00000390360 MARF1Q9Y4F3 1742 aaKnown RBP13.73□□□□□ -0.21
TRBV6-4-201ENST00000390360 KIAA0232Q92628 1395 aa13.72□□□□□ -0.21
TRBV6-4-201ENST00000390360 NRKQ7Z2Y5 1582 aa13.72□□□□□ -0.21
TRBV6-4-201ENST00000390360 RXRBP28702 533 aa13.72□□□□□ -0.21
TRBV6-4-201ENST00000390360 ZEB1P37275 1124 aaPredicted RBP13.72□□□□□ -0.21
TRBV6-4-201ENST00000390360 NME9Q86XW9 330 aa13.72□□□□□ -0.21
TRBV6-4-201ENST00000390360 UNC5CLQ8IV45 518 aa13.72□□□□□ -0.21
TRBV6-4-201ENST00000390360 PIK3C2AO00443 1686 aa13.72□□□□□ -0.21
TRBV6-4-201ENST00000390360 CPDO75976 1380 aa13.71□□□□□ -0.21
TRBV6-4-201ENST00000390360 USP31Q70CQ4 1352 aa13.71□□□□□ -0.21
TRBV6-4-201ENST00000390360 SLIT2O94813 1529 aa13.71□□□□□ -0.21
TRBV6-4-201ENST00000390360 CRYBG1Q9Y4K1 1723 aa13.71□□□□□ -0.21
TRBV6-4-201ENST00000390360 ILDR2Q71H61 639 aa13.71□□□□□ -0.21
TRBV6-4-201ENST00000390360 PHRF1Q9P1Y6 1649 aaKnown RBP13.71□□□□□ -0.22
TRBV6-4-201ENST00000390360 BCL9LQ86UU0 1499 aa13.7□□□□□ -0.22
TRBV6-4-201ENST00000390360 C11orf95C9JLR9 678 aaPredicted RBP13.7□□□□□ -0.22
TRBV6-4-201ENST00000390360 RBM6P78332 1123 aaKnown RBP13.7□□□□□ -0.22
TRBV6-4-201ENST00000390360 BTG4Q9NY30 223 aa13.7□□□□□ -0.22
TRBV6-4-201ENST00000390360 SLIT3O75094 1523 aa13.69□□□□□ -0.22
TRBV6-4-201ENST00000390360 SOX12O15370 315 aa13.69□□□□□ -0.22
TRBV6-4-201ENST00000390360 CHRNA2Q15822 529 aa13.69□□□□□ -0.22
TRBV6-4-201ENST00000390360 COG3Q96JB2 828 aa13.69□□□□□ -0.22
TRBV6-4-201ENST00000390360 ZRANB1Q9UGI0 708 aa13.69□□□□□ -0.22
TRBV6-4-201ENST00000390360 COL14A1Q05707 1796 aaKnown RBP13.68□□□□□ -0.22
TRBV6-4-201ENST00000390360 KIF7Q2M1P5 1343 aa13.68□□□□□ -0.22
TRBV6-4-201ENST00000390360 ATRNO75882 1429 aa13.68□□□□□ -0.22
TRBV6-4-201ENST00000390360 ZBTB7CA1YPR0 619 aa13.68□□□□□ -0.22
TRBV6-4-201ENST00000390360 VPS72Q15906 364 aa13.68□□□□□ -0.22
TRBV6-4-201ENST00000390360 CARD14Q9BXL6 1004 aa13.68□□□□□ -0.22
TRBV6-4-201ENST00000390360 MYOM1P52179 1685 aa13.68□□□□□ -0.22
TRBV6-4-201ENST00000390360 NSD3Q9BZ95 1437 aa13.67□□□□□ -0.22
TRBV6-4-201ENST00000390360 GJD4Q96KN9 370 aaPredicted RBP13.67□□□□□ -0.22
TRBV6-4-201ENST00000390360 CCDC9Q9Y3X0 531 aaKnown RBP13.67□□□□□ -0.22
TRBV6-4-201ENST00000390360 NWD2Q9ULI1 1742 aa13.67□□□□□ -0.22
TRBV6-4-201ENST00000390360 CGNL1Q0VF96 1302 aa13.66□□□□□ -0.22
TRBV6-4-201ENST00000390360 OVOS2A0A0J9YW53 1432 aa13.66□□□□□ -0.22
TRBV6-4-201ENST00000390360 OVOS2Q6IE36 1432 aa13.66□□□□□ -0.22
TRBV6-4-201ENST00000390360 FYB1O15117 783 aa13.66□□□□□ -0.22
TRBV6-4-201ENST00000390360 EVA1CP58658 441 aa13.66□□□□□ -0.22
TRBV6-4-201ENST00000390360 ARHGEF25Q86VW2 580 aa13.66□□□□□ -0.22
TRBV6-4-201ENST00000390360 PANK3Q9H999 370 aa13.66□□□□□ -0.22
TRBV6-4-201ENST00000390360 AATKQ6ZMQ8 1374 aa13.66□□□□□ -0.22
TRBV6-4-201ENST00000390360 PLCH1Q4KWH8 1693 aa13.66□□□□□ -0.22
TRBV6-4-201ENST00000390360 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.65□□□□□ -0.22
TRBV6-4-201ENST00000390360 GGNBP2Q9H3C7 697 aa13.65□□□□□ -0.22
TRBV6-4-201ENST00000390360 STRN4Q9NRL3 753 aa13.65□□□□□ -0.22
TRBV6-4-201ENST00000390360 USP54Q70EL1 1684 aa13.64□□□□□ -0.23
TRBV6-4-201ENST00000390360 CDK12Q9NYV4 1490 aaPredicted RBP13.64□□□□□ -0.23
TRBV6-4-201ENST00000390360 CCDC7Q96M83 1385 aa13.64□□□□□ -0.23
TRBV6-4-201ENST00000390360 NFAT5O94916 1531 aa13.63□□□□□ -0.23
TRBV6-4-201ENST00000390360 WASHC2AQ641Q2 1341 aa13.63□□□□□ -0.23
TRBV6-4-201ENST00000390360 KNSTRNQ9Y448 316 aa13.62□□□□□ -0.23
TRBV6-4-201ENST00000390360 SPATA31A5Q5VU36 1347 aa13.62□□□□□ -0.23
TRBV6-4-201ENST00000390360 SPATA31A7Q8IWB4 1347 aa13.62□□□□□ -0.23
TRBV6-4-201ENST00000390360 CAMTA1Q9Y6Y1 1673 aa13.61□□□□□ -0.23
TRBV6-4-201ENST00000390360 LMO7Q8WWI1 1683 aa13.6□□□□□ -0.23
TRBV6-4-201ENST00000390360 NRAPQ86VF7 1730 aa13.6□□□□□ -0.23
TRBV6-4-201ENST00000390360 AXIN2Q9Y2T1 843 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms