RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 KIAA2012Q0VF49 1180 aa12.54□□□□□ -0.4
PKP4-201ENST00000389757 CLASRPQ8N2M8 674 aaKnown RBP12.54□□□□□ -0.4
PKP4-201ENST00000389757 FOXO3O43524 673 aa12.54□□□□□ -0.4
PKP4-201ENST00000389757 SLC4A2P04920 1241 aa12.54□□□□□ -0.4
PKP4-201ENST00000389757 GLIPR1L2Q4G1C9 344 aa12.54□□□□□ -0.4
PKP4-201ENST00000389757 WASLO00401 505 aaPredicted RBP12.54□□□□□ -0.4
PKP4-201ENST00000389757 CPLX1O14810 134 aa12.54□□□□□ -0.4
PKP4-201ENST00000389757 FCHSD2O94868 740 aa12.54□□□□□ -0.4
PKP4-201ENST00000389757 WASHC4Q2M389 1173 aa12.54□□□□□ -0.4
PKP4-201ENST00000389757 GPATCH8Q9UKJ3 1502 aaKnown RBP12.54□□□□□ -0.4
PKP4-201ENST00000389757 THOC2Q8NI27 1593 aaKnown RBP12.53□□□□□ -0.4
PKP4-201ENST00000389757 SURF6O75683 361 aaKnown RBP12.53□□□□□ -0.4
PKP4-201ENST00000389757 HMGB2P26583 209 aaKnown RBP12.53□□□□□ -0.4
PKP4-201ENST00000389757 PDE4AP27815 886 aa12.53□□□□□ -0.4
PKP4-201ENST00000389757 CCDC27Q2M243 656 aa12.53□□□□□ -0.4
PKP4-201ENST00000389757 GZF1Q9H116 711 aaPredicted RBP12.53□□□□□ -0.4
PKP4-201ENST00000389757 RAPGEF6Q8TEU7 1601 aa12.53□□□□□ -0.4
PKP4-201ENST00000389757 IPO9Q96P70 1041 aaKnown RBP12.53□□□□□ -0.4
PKP4-201ENST00000389757 ERICH2A1L162 156 aa12.53□□□□□ -0.4
PKP4-201ENST00000389757 TRIM29Q14134 588 aa12.53□□□□□ -0.4
PKP4-201ENST00000389757 TSR2Q969E8 191 aaKnown RBP12.53□□□□□ -0.4
PKP4-201ENST00000389757 ATP6V1DQ9Y5K8 247 aa12.53□□□□□ -0.4
PKP4-201ENST00000389757 INTS3Q68E01 1043 aaKnown RBP12.53□□□□□ -0.4
PKP4-201ENST00000389757 WWC1Q8IX03 1113 aa12.53□□□□□ -0.4
PKP4-201ENST00000389757 FOXD4L5Q5VV16 416 aaPredicted RBP12.52□□□□□ -0.4
PKP4-201ENST00000389757 FOXD4L4Q8WXT5 416 aaPredicted RBP12.52□□□□□ -0.4
PKP4-201ENST00000389757 CDCA7LQ96GN5 454 aa12.52□□□□□ -0.4
PKP4-201ENST00000389757 MSNP26038 577 aaKnown RBP12.52□□□□□ -0.41
PKP4-201ENST00000389757 WDR7Q9Y4E6 1490 aa12.52□□□□□ -0.41
PKP4-201ENST00000389757 PPP1R1BQ9UD71 204 aaPredicted RBP12.52□□□□□ -0.41
PKP4-201ENST00000389757 KDM5BQ9UGL1 1544 aa12.52□□□□□ -0.41
PKP4-201ENST00000389757 LRPPRCP42704 1394 aaKnown RBP12.52□□□□□ -0.41
PKP4-201ENST00000389757 NOS1P29475 1434 aa12.52□□□□□ -0.41
PKP4-201ENST00000389757 WDR63Q8IWG1 891 aa12.52□□□□□ -0.41
PKP4-201ENST00000389757 BTBD11A6QL63 1104 aa12.51□□□□□ -0.41
PKP4-201ENST00000389757 NFXL1Q6ZNB6 911 aa12.51□□□□□ -0.41
PKP4-201ENST00000389757 TBC1D2BQ9UPU7 963 aa12.51□□□□□ -0.41
PKP4-201ENST00000389757 TCEAL9Q9UHQ7 104 aa12.51□□□□□ -0.41
PKP4-201ENST00000389757 ADAMTS2O95450 1211 aa12.5□□□□□ -0.41
PKP4-201ENST00000389757 MCTP1Q6DN14 999 aa12.5□□□□□ -0.41
PKP4-201ENST00000389757 CNNM1Q9NRU3 951 aa12.5□□□□□ -0.41
PKP4-201ENST00000389757 GNAI2P04899 355 aa12.5□□□□□ -0.41
PKP4-201ENST00000389757 MYL6BP14649 208 aa12.5□□□□□ -0.41
PKP4-201ENST00000389757 RALYLQ86SE5 291 aaKnown RBP12.5□□□□□ -0.41
PKP4-201ENST00000389757 CADPS2Q86UW7 1296 aa12.5□□□□□ -0.41
PKP4-201ENST00000389757 CCT4P50991 539 aaKnown RBP12.5□□□□□ -0.41
PKP4-201ENST00000389757 NCBP3Q53F19 620 aaKnown RBP12.5□□□□□ -0.41
PKP4-201ENST00000389757 FYB1O15117 783 aa12.5□□□□□ -0.41
PKP4-201ENST00000389757 CT47B1P0C2W7 299 aaPredicted RBP12.5□□□□□ -0.41
PKP4-201ENST00000389757 ERC1Q8IUD2 1116 aa12.5□□□□□ -0.41
PKP4-201ENST00000389757 SRCIN1Q9C0H9 1055 aa12.5□□□□□ -0.41
PKP4-201ENST00000389757 GNAT3A8MTJ3 354 aa12.49□□□□□ -0.41
PKP4-201ENST00000389757 NME9Q86XW9 330 aa12.49□□□□□ -0.41
PKP4-201ENST00000389757 NINLQ9Y2I6 1382 aa12.49□□□□□ -0.41
PKP4-201ENST00000389757 NFE2L2Q16236 605 aa12.49□□□□□ -0.41
PKP4-201ENST00000389757 FSD1Q9BTV5 496 aa12.49□□□□□ -0.41
PKP4-201ENST00000389757 C14orf93Q9H972 538 aaKnown RBP12.49□□□□□ -0.41
PKP4-201ENST00000389757 ZNF518AQ6AHZ1 1483 aa12.49□□□□□ -0.41
PKP4-201ENST00000389757 CREBRFQ8IUR6 639 aa12.49□□□□□ -0.41
PKP4-201ENST00000389757 PHF14O94880 888 aa12.48□□□□□ -0.41
PKP4-201ENST00000389757 CNTROBQ8N137 903 aa12.48□□□□□ -0.41
PKP4-201ENST00000389757 CWC22Q9HCG8 908 aaKnown RBP12.48□□□□□ -0.41
PKP4-201ENST00000389757 NOB1Q9ULX3 412 aaKnown RBP12.48□□□□□ -0.41
PKP4-201ENST00000389757 A2MP01023 1474 aa12.48□□□□□ -0.41
PKP4-201ENST00000389757 GNL3LQ9NVN8 582 aaKnown RBP12.48□□□□□ -0.41
PKP4-201ENST00000389757 NGLY1Q96IV0 654 aa12.48□□□□□ -0.41
PKP4-201ENST00000389757 NUP153P49790 1475 aaKnown RBP12.48□□□□□ -0.41
PKP4-201ENST00000389757 KRT28Q7Z3Y7 464 aa12.48□□□□□ -0.41
PKP4-201ENST00000389757 STARD3NLO95772 234 aa12.47□□□□□ -0.41
PKP4-201ENST00000389757 ADAMTS12P58397 1594 aa12.47□□□□□ -0.41
PKP4-201ENST00000389757 AMOTQ4VCS5 1084 aa12.47□□□□□ -0.41
PKP4-201ENST00000389757 NAP1L5Q96NT1 182 aaPredicted RBP12.47□□□□□ -0.41
PKP4-201ENST00000389757 TMOD3Q9NYL9 352 aa12.47□□□□□ -0.41
PKP4-201ENST00000389757 PDE3AQ14432 1141 aa12.46□□□□□ -0.41
PKP4-201ENST00000389757 DNAJC2Q99543 621 aaKnown RBP12.46□□□□□ -0.41
PKP4-201ENST00000389757 UHRF1BP1LA0JNW5 1464 aa12.46□□□□□ -0.41
PKP4-201ENST00000389757 CDC45O75419 566 aa12.46□□□□□ -0.41
PKP4-201ENST00000389757 CCDC158Q5M9N0 1113 aa12.46□□□□□ -0.42
PKP4-201ENST00000389757 MPHOSPH8Q99549 860 aa12.45□□□□□ -0.42
PKP4-201ENST00000389757 SAMD1Q6SPF0 538 aaPredicted RBP12.45□□□□□ -0.42
PKP4-201ENST00000389757 SCAF11Q99590 1463 aaKnown RBP12.45□□□□□ -0.42
PKP4-201ENST00000389757 AMER1Q5JTC6 1135 aaPredicted RBP12.45□□□□□ -0.42
PKP4-201ENST00000389757 WDR97A6NE52 1622 aa12.45□□□□□ -0.42
PKP4-201ENST00000389757 TMPOP42166 694 aaKnown RBP12.45□□□□□ -0.42
PKP4-201ENST00000389757 MSH6P52701 1360 aa12.45□□□□□ -0.42
PKP4-201ENST00000389757 CCDC57Q2TAC2 916 aa12.45□□□□□ -0.42
PKP4-201ENST00000389757 UGGT2Q9NYU1 1516 aa12.44□□□□□ -0.42
PKP4-201ENST00000389757 DDX11L8A8MPP1 907 aa12.44□□□□□ -0.42
PKP4-201ENST00000389757 TTC39AQ5SRH9 613 aa12.44□□□□□ -0.42
PKP4-201ENST00000389757 DUOX2Q9NRD8 1548 aa12.44□□□□□ -0.42
PKP4-201ENST00000389757 FOXD4L6Q3SYB3 417 aaPredicted RBP12.44□□□□□ -0.42
PKP4-201ENST00000389757 FOXD4L3Q6VB84 417 aaPredicted RBP12.44□□□□□ -0.42
PKP4-201ENST00000389757 C1orf115Q9H7X2 142 aa12.44□□□□□ -0.42
PKP4-201ENST00000389757 TPD52L1Q16890 204 aaPredicted RBP12.44□□□□□ -0.42
PKP4-201ENST00000389757 ZNF428Q96B54 188 aa12.44□□□□□ -0.42
PKP4-201ENST00000389757 HIP1O00291 1037 aa12.43□□□□□ -0.42
PKP4-201ENST00000389757 GCC1Q96CN9 775 aa12.43□□□□□ -0.42
PKP4-201ENST00000389757 TSHZ2Q9NRE2 1034 aa12.43□□□□□ -0.42
PKP4-201ENST00000389757 SYCP2Q9BX26 1530 aa12.43□□□□□ -0.42
PKP4-201ENST00000389757 PTCD1O75127 700 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms