RNA–Protein interactions for RNA: ENST00000389675.6

MRPL28-202, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL28, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-202ENST00000389675 ARHGEF10O15013 1369 aa22.74■■□□□ 1.23
MRPL28-202ENST00000389675 PLEKHG5O94827 1062 aa22.72■■□□□ 1.23
MRPL28-202ENST00000389675 TRPM3Q9HCF6 1732 aaPredicted RBP22.71■■□□□ 1.23
MRPL28-202ENST00000389675 RXRBP28702 533 aa22.71■■□□□ 1.23
MRPL28-202ENST00000389675 HAP1P54257 671 aaPredicted RBP22.71■■□□□ 1.23
MRPL28-202ENST00000389675 ZNF692Q9BU19 519 aaPredicted RBP22.7■■□□□ 1.22
MRPL28-202ENST00000389675 COL22A1Q8NFW1 1626 aaPredicted RBP22.7■■□□□ 1.22
MRPL28-202ENST00000389675 HDGFL2Q7Z4V5 671 aaPredicted RBP22.69■■□□□ 1.22
MRPL28-202ENST00000389675 USP6P35125 1406 aa22.68■■□□□ 1.22
MRPL28-202ENST00000389675 NINLQ9Y2I6 1382 aa22.68■■□□□ 1.22
MRPL28-202ENST00000389675 POLR3GLQ9BT43 218 aa22.68■■□□□ 1.22
MRPL28-202ENST00000389675 SLC12A5Q9H2X9 1139 aa22.68■■□□□ 1.22
MRPL28-202ENST00000389675 TERF2IPQ9NYB0 399 aa22.68■■□□□ 1.22
MRPL28-202ENST00000389675 BRD4O60885 1362 aaPredicted RBP22.67■■□□□ 1.22
MRPL28-202ENST00000389675 KTN1Q86UP2 1357 aaKnown RBP22.67■■□□□ 1.22
MRPL28-202ENST00000389675 ADAMTS2O95450 1211 aa22.67■■□□□ 1.22
MRPL28-202ENST00000389675 AFF2P51816 1311 aa22.66■■□□□ 1.22
MRPL28-202ENST00000389675 ALS2Q96Q42 1657 aa22.66■■□□□ 1.22
MRPL28-202ENST00000389675 ABTB2Q8N961 1025 aa22.65■■□□□ 1.22
MRPL28-202ENST00000389675 AKAP12Q02952 1782 aa22.65■■□□□ 1.22
MRPL28-202ENST00000389675 NUTM2GQ5VZR2 741 aa22.64■■□□□ 1.21
MRPL28-202ENST00000389675 CABLES1Q8TDN4 633 aa22.64■■□□□ 1.21
MRPL28-202ENST00000389675 RGS12O14924 1447 aa22.64■■□□□ 1.21
MRPL28-202ENST00000389675 CPSF1Q10570 1443 aaKnown RBP22.64■■□□□ 1.21
MRPL28-202ENST00000389675 C8orf37Q96NL8 207 aa22.62■■□□□ 1.21
MRPL28-202ENST00000389675 A0A1W2PP64 1363 aa22.61■■□□□ 1.21
MRPL28-202ENST00000389675 CD163L1Q9NR16 1453 aa22.6■■□□□ 1.21
MRPL28-202ENST00000389675 TTC21BQ7Z4L5 1316 aa22.6■■□□□ 1.21
MRPL28-202ENST00000389675 MON2Q7Z3U7 1717 aa22.6■■□□□ 1.21
MRPL28-202ENST00000389675 ZEB1P37275 1124 aaPredicted RBP22.59■■□□□ 1.21
MRPL28-202ENST00000389675 NLRP13Q86W25 1043 aa22.59■■□□□ 1.21
MRPL28-202ENST00000389675 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.59■■□□□ 1.21
MRPL28-202ENST00000389675 NGLY1Q96IV0 654 aa22.59■■□□□ 1.21
MRPL28-202ENST00000389675 TTC21AQ8NDW8 1320 aa22.58■■□□□ 1.21
MRPL28-202ENST00000389675 NLRP6P59044 892 aa22.58■■□□□ 1.21
MRPL28-202ENST00000389675 SSH2Q76I76 1423 aa22.57■■□□□ 1.2
MRPL28-202ENST00000389675 ANKRD36BQ8N2N9 1353 aa22.57■■□□□ 1.2
MRPL28-202ENST00000389675 ABCA3Q99758 1704 aa22.57■■□□□ 1.2
MRPL28-202ENST00000389675 EDC4Q6P2E9 1401 aaKnown RBP22.57■■□□□ 1.2
MRPL28-202ENST00000389675 NRKQ7Z2Y5 1582 aa22.56■■□□□ 1.2
MRPL28-202ENST00000389675 RBM6P78332 1123 aaKnown RBP22.54■■□□□ 1.2
MRPL28-202ENST00000389675 MARF1Q9Y4F3 1742 aaKnown RBP22.54■■□□□ 1.2
MRPL28-202ENST00000389675 PIK3C2AO00443 1686 aa22.53■■□□□ 1.2
MRPL28-202ENST00000389675 MYOM1P52179 1685 aa22.53■■□□□ 1.2
MRPL28-202ENST00000389675 QTRT2Q9H974 415 aaKnown RBP22.53■■□□□ 1.2
MRPL28-202ENST00000389675 C11orf95C9JLR9 678 aaPredicted RBP22.52■■□□□ 1.2
MRPL28-202ENST00000389675 PHRF1Q9P1Y6 1649 aaKnown RBP22.52■■□□□ 1.2
MRPL28-202ENST00000389675 USP19O94966 1318 aa22.52■■□□□ 1.2
MRPL28-202ENST00000389675 CRYBG1Q9Y4K1 1723 aa22.51■■□□□ 1.19
MRPL28-202ENST00000389675 NME9Q86XW9 330 aa22.51■■□□□ 1.19
MRPL28-202ENST00000389675 ZC3H6P61129 1189 aaKnown RBP22.49■■□□□ 1.19
MRPL28-202ENST00000389675 PRDM11Q9NQV5 511 aa22.49■■□□□ 1.19
MRPL28-202ENST00000389675 USP21Q9UK80 565 aa22.49■■□□□ 1.19
MRPL28-202ENST00000389675 KIF7Q2M1P5 1343 aa22.49■■□□□ 1.19
MRPL28-202ENST00000389675 GCP02774 474 aa22.48■■□□□ 1.19
MRPL28-202ENST00000389675 SOX12O15370 315 aa22.47■■□□□ 1.19
MRPL28-202ENST00000389675 KIAA0232Q92628 1395 aa22.47■■□□□ 1.19
MRPL28-202ENST00000389675 ZBTB7CA1YPR0 619 aa22.46■■□□□ 1.19
MRPL28-202ENST00000389675 FNBP4Q8N3X1 1017 aaPredicted RBP22.46■■□□□ 1.19
MRPL28-202ENST00000389675 KCNH5Q8NCM2 988 aa22.46■■□□□ 1.19
MRPL28-202ENST00000389675 ZRANB1Q9UGI0 708 aa22.46■■□□□ 1.19
MRPL28-202ENST00000389675 NSD3Q9BZ95 1437 aa22.46■■□□□ 1.19
MRPL28-202ENST00000389675 FAM83GA6ND36 823 aa22.45■■□□□ 1.18
MRPL28-202ENST00000389675 USP31Q70CQ4 1352 aa22.45■■□□□ 1.18
MRPL28-202ENST00000389675 SLIT3O75094 1523 aa22.45■■□□□ 1.18
MRPL28-202ENST00000389675 COG3Q96JB2 828 aa22.44■■□□□ 1.18
MRPL28-202ENST00000389675 COL14A1Q05707 1796 aaKnown RBP22.43■■□□□ 1.18
MRPL28-202ENST00000389675 CCDC7Q96M83 1385 aa22.43■■□□□ 1.18
MRPL28-202ENST00000389675 CHRNA2Q15822 529 aa22.43■■□□□ 1.18
MRPL28-202ENST00000389675 CARD14Q9BXL6 1004 aa22.43■■□□□ 1.18
MRPL28-202ENST00000389675 PANK3Q9H999 370 aa22.43■■□□□ 1.18
MRPL28-202ENST00000389675 PLCH1Q4KWH8 1693 aa22.42■■□□□ 1.18
MRPL28-202ENST00000389675 SLIT2O94813 1529 aa22.42■■□□□ 1.18
MRPL28-202ENST00000389675 CPDO75976 1380 aa22.41■■□□□ 1.18
MRPL28-202ENST00000389675 UNC5CLQ8IV45 518 aa22.41■■□□□ 1.18
MRPL28-202ENST00000389675 BTG4Q9NY30 223 aa22.41■■□□□ 1.18
MRPL28-202ENST00000389675 TRPC5Q9UL62 973 aaPredicted RBP22.41■■□□□ 1.18
MRPL28-202ENST00000389675 USP54Q70EL1 1684 aa22.4■■□□□ 1.18
MRPL28-202ENST00000389675 CGNL1Q0VF96 1302 aa22.4■■□□□ 1.18
MRPL28-202ENST00000389675 WASHC2AQ641Q2 1341 aa22.4■■□□□ 1.18
MRPL28-202ENST00000389675 GGNBP2Q9H3C7 697 aa22.4■■□□□ 1.18
MRPL28-202ENST00000389675 BCL9LQ86UU0 1499 aa22.4■■□□□ 1.18
MRPL28-202ENST00000389675 OVOS2A0A0J9YW53 1432 aa22.4■■□□□ 1.18
MRPL28-202ENST00000389675 OVOS2Q6IE36 1432 aa22.4■■□□□ 1.18
MRPL28-202ENST00000389675 FYB1O15117 783 aa22.39■■□□□ 1.17
MRPL28-202ENST00000389675 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.39■■□□□ 1.17
MRPL28-202ENST00000389675 NWD2Q9ULI1 1742 aa22.39■■□□□ 1.17
MRPL28-202ENST00000389675 ATRNO75882 1429 aa22.39■■□□□ 1.17
MRPL28-202ENST00000389675 KIF20BQ96Q89 1820 aa22.38■■□□□ 1.17
MRPL28-202ENST00000389675 CCDC9Q9Y3X0 531 aaKnown RBP22.38■■□□□ 1.17
MRPL28-202ENST00000389675 EP400Q96L91 3159 aa22.38■■□□□ 1.17
MRPL28-202ENST00000389675 SRCAPQ6ZRS2 3230 aa22.36■■□□□ 1.17
MRPL28-202ENST00000389675 NFAT5O94916 1531 aa22.36■■□□□ 1.17
MRPL28-202ENST00000389675 STRN4Q9NRL3 753 aa22.35■■□□□ 1.17
MRPL28-202ENST00000389675 KNSTRNQ9Y448 316 aa22.35■■□□□ 1.17
MRPL28-202ENST00000389675 EVA1CP58658 441 aa22.34■■□□□ 1.17
MRPL28-202ENST00000389675 ARHGEF25Q86VW2 580 aa22.34■■□□□ 1.17
MRPL28-202ENST00000389675 AATKQ6ZMQ8 1374 aa22.34■■□□□ 1.17
MRPL28-202ENST00000389675 VPS72Q15906 364 aa22.32■■□□□ 1.16
MRPL28-202ENST00000389675 NRAPQ86VF7 1730 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms