RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ERC2O15083 957 aa15.93■□□□□ 0.14
TRAPPC9-201ENST00000389328 SPC24Q8NBT2 197 aa15.93■□□□□ 0.14
TRAPPC9-201ENST00000389328 RBM42Q9BTD8 480 aaKnown RBP15.93■□□□□ 0.14
TRAPPC9-201ENST00000389328 PDCL3Q9H2J4 239 aa15.93■□□□□ 0.14
TRAPPC9-201ENST00000389328 BAG4O95429 457 aaKnown RBP15.92■□□□□ 0.14
TRAPPC9-201ENST00000389328 TBC1D9Q6ZT07 1266 aa15.92■□□□□ 0.14
TRAPPC9-201ENST00000389328 EIF2S2P20042 333 aaKnown RBP15.92■□□□□ 0.14
TRAPPC9-201ENST00000389328 ADGRF5Q8IZF2 1346 aa15.92■□□□□ 0.14
TRAPPC9-201ENST00000389328 CCDC141Q6ZP82 1450 aa15.92■□□□□ 0.14
TRAPPC9-201ENST00000389328 MAGI1Q96QZ7 1491 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC9-201ENST00000389328 PRDM10Q9NQV6 1147 aa15.92■□□□□ 0.14
TRAPPC9-201ENST00000389328 TSPYL4Q9UJ04 414 aa15.92■□□□□ 0.14
TRAPPC9-201ENST00000389328 H3BQV1 296 aa15.91■□□□□ 0.14
TRAPPC9-201ENST00000389328 IFFO2Q5TF58 517 aa15.91■□□□□ 0.14
TRAPPC9-201ENST00000389328 BICD2Q8TD16 824 aa15.91■□□□□ 0.14
TRAPPC9-201ENST00000389328 HDGFP51858 240 aaKnown RBP15.9■□□□□ 0.14
TRAPPC9-201ENST00000389328 SMARCA5O60264 1052 aaPredicted RBP15.9■□□□□ 0.14
TRAPPC9-201ENST00000389328 ZKSCAN1P17029 563 aaPredicted RBP15.9■□□□□ 0.14
TRAPPC9-201ENST00000389328 PRAM1Q96QH2 718 aa15.9■□□□□ 0.14
TRAPPC9-201ENST00000389328 URB2Q14146 1524 aaKnown RBP15.9■□□□□ 0.14
TRAPPC9-201ENST00000389328 HMGN5P82970 282 aaKnown RBP15.9■□□□□ 0.14
TRAPPC9-201ENST00000389328 CABP1Q9NZU7 370 aa15.9■□□□□ 0.14
TRAPPC9-201ENST00000389328 RBM27Q9P2N5 1060 aaKnown RBP15.9■□□□□ 0.14
TRAPPC9-201ENST00000389328 GNL2Q13823 731 aaKnown RBP15.9■□□□□ 0.14
TRAPPC9-201ENST00000389328 CCDC9Q9Y3X0 531 aaKnown RBP15.89■□□□□ 0.13
TRAPPC9-201ENST00000389328 MCM2P49736 904 aa15.89■□□□□ 0.13
TRAPPC9-201ENST00000389328 NGDNQ8NEJ9 315 aaKnown RBP15.89■□□□□ 0.13
TRAPPC9-201ENST00000389328 BMP2KLQ5H9B9 411 aa15.89■□□□□ 0.13
TRAPPC9-201ENST00000389328 SLC4A2P04920 1241 aa15.88■□□□□ 0.13
TRAPPC9-201ENST00000389328 FBXW7Q969H0 707 aa15.88■□□□□ 0.13
TRAPPC9-201ENST00000389328 A0A0G2JS52 829 aa15.88■□□□□ 0.13
TRAPPC9-201ENST00000389328 FAM184AQ8NB25 1140 aa15.88■□□□□ 0.13
TRAPPC9-201ENST00000389328 KLHL40Q2TBA0 621 aa15.88■□□□□ 0.13
TRAPPC9-201ENST00000389328 TNNT3P45378 269 aaPredicted RBP15.88■□□□□ 0.13
TRAPPC9-201ENST00000389328 UPF3BQ9BZI7 483 aaKnown RBP15.88■□□□□ 0.13
TRAPPC9-201ENST00000389328 HDAC1Q13547 482 aaPredicted RBP15.87■□□□□ 0.13
TRAPPC9-201ENST00000389328 SF3A1Q15459 793 aaKnown RBP15.87■□□□□ 0.13
TRAPPC9-201ENST00000389328 RUFY2Q8WXA3 655 aa15.87■□□□□ 0.13
TRAPPC9-201ENST00000389328 SCAF11Q99590 1463 aaKnown RBP15.86■□□□□ 0.13
TRAPPC9-201ENST00000389328 SURF6O75683 361 aaKnown RBP15.85■□□□□ 0.13
TRAPPC9-201ENST00000389328 SASS6Q6UVJ0 657 aa15.85■□□□□ 0.13
TRAPPC9-201ENST00000389328 TRIM5Q9C035 493 aa15.85■□□□□ 0.13
TRAPPC9-201ENST00000389328 GDPD2Q9HCC8 539 aa15.85■□□□□ 0.13
TRAPPC9-201ENST00000389328 FCHSD2O94868 740 aa15.85■□□□□ 0.13
TRAPPC9-201ENST00000389328 TPM4P67936 248 aa15.85■□□□□ 0.13
TRAPPC9-201ENST00000389328 NUCB1Q02818 461 aa15.85■□□□□ 0.13
TRAPPC9-201ENST00000389328 DCTN1Q14203 1278 aa15.85■□□□□ 0.13
TRAPPC9-201ENST00000389328 FOSBP53539 338 aa15.85■□□□□ 0.13
TRAPPC9-201ENST00000389328 CARD14Q9BXL6 1004 aa15.85■□□□□ 0.13
TRAPPC9-201ENST00000389328 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.85■□□□□ 0.13
TRAPPC9-201ENST00000389328 MAP4K4O95819 1239 aaPredicted RBP15.84■□□□□ 0.13
TRAPPC9-201ENST00000389328 IFIT2P09913 472 aaKnown RBP15.84■□□□□ 0.13
TRAPPC9-201ENST00000389328 ZSCAN23Q3MJ62 389 aa15.84■□□□□ 0.13
TRAPPC9-201ENST00000389328 GAS2L2Q8NHY3 880 aa15.84■□□□□ 0.13
TRAPPC9-201ENST00000389328 NUP153P49790 1475 aaKnown RBP15.84■□□□□ 0.13
TRAPPC9-201ENST00000389328 WDR33Q9C0J8 1336 aaKnown RBP15.84■□□□□ 0.13
TRAPPC9-201ENST00000389328 EXOC6BQ9Y2D4 811 aa15.84■□□□□ 0.13
TRAPPC9-201ENST00000389328 UBTFL1P0CB47 393 aaPredicted RBP15.84■□□□□ 0.13
TRAPPC9-201ENST00000389328 UHRF1BP1Q6BDS2 1440 aa15.83■□□□□ 0.12
TRAPPC9-201ENST00000389328 ALDH1L2Q3SY69 923 aa15.83■□□□□ 0.12
TRAPPC9-201ENST00000389328 SULT6B1Q6IMI4 303 aa15.83■□□□□ 0.12
TRAPPC9-201ENST00000389328 C9orf78Q9NZ63 289 aaPredicted RBP15.83■□□□□ 0.12
TRAPPC9-201ENST00000389328 ASXL1Q8IXJ9 1541 aa15.83■□□□□ 0.12
TRAPPC9-201ENST00000389328 NFE2L2Q16236 605 aa15.83■□□□□ 0.12
TRAPPC9-201ENST00000389328 ZNF428Q96B54 188 aa15.83■□□□□ 0.12
TRAPPC9-201ENST00000389328 GNAI2P04899 355 aa15.82■□□□□ 0.12
TRAPPC9-201ENST00000389328 KDM6BO15054 1643 aa15.82■□□□□ 0.12
TRAPPC9-201ENST00000389328 CDK19Q9BWU1 502 aa15.82■□□□□ 0.12
TRAPPC9-201ENST00000389328 CBX1P83916 185 aa15.82■□□□□ 0.12
TRAPPC9-201ENST00000389328 RAB3GAP1Q15042 981 aa15.82■□□□□ 0.12
TRAPPC9-201ENST00000389328 TPD52L1Q16890 204 aaPredicted RBP15.82■□□□□ 0.12
TRAPPC9-201ENST00000389328 SNX21Q969T3 373 aa15.82■□□□□ 0.12
TRAPPC9-201ENST00000389328 USP25Q9UHP3 1055 aa15.82■□□□□ 0.12
TRAPPC9-201ENST00000389328 ZMYM4Q5VZL5 1548 aa15.81■□□□□ 0.12
TRAPPC9-201ENST00000389328 IFT140Q96RY7 1462 aa15.81■□□□□ 0.12
TRAPPC9-201ENST00000389328 LETM1O95202 739 aaPredicted RBP15.81■□□□□ 0.12
TRAPPC9-201ENST00000389328 RPAP2Q8IXW5 612 aaPredicted RBP15.81■□□□□ 0.12
TRAPPC9-201ENST00000389328 HDAC5Q9UQL6 1122 aa15.81■□□□□ 0.12
TRAPPC9-201ENST00000389328 BLMP54132 1417 aaPredicted RBP15.81■□□□□ 0.12
TRAPPC9-201ENST00000389328 NPHP1O15259 732 aa15.81■□□□□ 0.12
TRAPPC9-201ENST00000389328 GNAI3P08754 354 aa15.81■□□□□ 0.12
TRAPPC9-201ENST00000389328 RRS1Q15050 365 aaKnown RBP15.81■□□□□ 0.12
TRAPPC9-201ENST00000389328 CCAR2Q8N163 923 aaKnown RBP15.81■□□□□ 0.12
TRAPPC9-201ENST00000389328 LRRCC1Q9C099 1032 aa15.81■□□□□ 0.12
TRAPPC9-201ENST00000389328 IL1RAPL2Q9NP60 686 aa15.81■□□□□ 0.12
TRAPPC9-201ENST00000389328 SMC5Q8IY18 1101 aa15.81■□□□□ 0.12
TRAPPC9-201ENST00000389328 KIF3AQ9Y496 699 aa15.81■□□□□ 0.12
TRAPPC9-201ENST00000389328 CHMP4AQ9BY43 222 aa15.8■□□□□ 0.12
TRAPPC9-201ENST00000389328 MRC2Q9UBG0 1479 aa15.8■□□□□ 0.12
TRAPPC9-201ENST00000389328 MAGI3Q5TCQ9 1506 aa15.8■□□□□ 0.12
TRAPPC9-201ENST00000389328 COL17A1Q9UMD9 1497 aaPredicted RBP15.8■□□□□ 0.12
TRAPPC9-201ENST00000389328 HOMER1Q86YM7 354 aa15.8■□□□□ 0.12
TRAPPC9-201ENST00000389328 FBLN1P23142 703 aa15.79■□□□□ 0.12
TRAPPC9-201ENST00000389328 PRIM1P49642 420 aaKnown RBP15.79■□□□□ 0.12
TRAPPC9-201ENST00000389328 ZHX1Q9UKY1 873 aaPredicted RBP15.79■□□□□ 0.12
TRAPPC9-201ENST00000389328 CTTNBP2Q8WZ74 1663 aa15.78■□□□□ 0.12
TRAPPC9-201ENST00000389328 MIS18AQ9NYP9 233 aa15.78■□□□□ 0.12
TRAPPC9-201ENST00000389328 TPM3P06753 285 aa15.78■□□□□ 0.12
TRAPPC9-201ENST00000389328 CNTROBQ8N137 903 aa15.78■□□□□ 0.12
TRAPPC9-201ENST00000389328 PIK3C2GO75747 1445 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms