RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 DLC1Q96QB1 1528 aa15.3■□□□□ 0.04
TRIM23-203ENST00000381018 SETD1AO15047 1707 aaKnown RBP15.3■□□□□ 0.04
TRIM23-203ENST00000381018 RLBP1P12271 317 aa15.3■□□□□ 0.04
TRIM23-203ENST00000381018 PLEKHF1Q96S99 279 aa15.3■□□□□ 0.04
TRIM23-203ENST00000381018 BCL2L13Q9BXK5 485 aa15.3■□□□□ 0.04
TRIM23-203ENST00000381018 STAG3Q9UJ98 1225 aa15.29■□□□□ 0.04
TRIM23-203ENST00000381018 TMPOP42166 694 aaKnown RBP15.29■□□□□ 0.04
TRIM23-203ENST00000381018 CDK19Q9BWU1 502 aa15.28■□□□□ 0.04
TRIM23-203ENST00000381018 PPP6R1Q9UPN7 881 aa15.28■□□□□ 0.04
TRIM23-203ENST00000381018 TNNQ9UQP3 1299 aa15.28■□□□□ 0.04
TRIM23-203ENST00000381018 ZMYM3Q14202 1370 aa15.28■□□□□ 0.04
TRIM23-203ENST00000381018 CDC42BPGQ6DT37 1551 aa15.28■□□□□ 0.04
TRIM23-203ENST00000381018 SPATA31D1Q6ZQQ2 1576 aa15.28■□□□□ 0.04
TRIM23-203ENST00000381018 RIMBP3CA6NJZ7 1639 aa15.28■□□□□ 0.04
TRIM23-203ENST00000381018 RIMBP3BA6NNM3 1639 aa15.28■□□□□ 0.04
TRIM23-203ENST00000381018 RIMBP3Q9UFD9 1639 aa15.28■□□□□ 0.04
TRIM23-203ENST00000381018 ZKSCAN2Q63HK3 967 aa15.27■□□□□ 0.04
TRIM23-203ENST00000381018 PNNQ9H307 717 aaKnown RBP15.27■□□□□ 0.03
TRIM23-203ENST00000381018 PCDHB15Q9Y5E8 787 aa15.27■□□□□ 0.03
TRIM23-203ENST00000381018 IL16Q14005 1332 aa15.27■□□□□ 0.03
TRIM23-203ENST00000381018 A2ML1A8K2U0 1454 aa15.27■□□□□ 0.03
TRIM23-203ENST00000381018 ATP7BP35670 1465 aa15.27■□□□□ 0.03
TRIM23-203ENST00000381018 MAP2P11137 1827 aaKnown RBP15.26■□□□□ 0.03
TRIM23-203ENST00000381018 MVPQ14764 893 aaKnown RBP15.26■□□□□ 0.03
TRIM23-203ENST00000381018 CYB5RLQ6IPT4 315 aa15.26■□□□□ 0.03
TRIM23-203ENST00000381018 PNPLA6Q8IY17 1366 aa15.26■□□□□ 0.03
TRIM23-203ENST00000381018 TSR2Q969E8 191 aaKnown RBP15.26■□□□□ 0.03
TRIM23-203ENST00000381018 DIAPH1O60610 1272 aaKnown RBP15.25■□□□□ 0.03
TRIM23-203ENST00000381018 SLC4A3P48751 1232 aa15.25■□□□□ 0.03
TRIM23-203ENST00000381018 FAM69CQ0P6D2 419 aa15.25■□□□□ 0.03
TRIM23-203ENST00000381018 FTSJ3Q8IY81 847 aaKnown RBP15.25■□□□□ 0.03
TRIM23-203ENST00000381018 RWDD1Q9H446 243 aaPredicted RBP15.25■□□□□ 0.03
TRIM23-203ENST00000381018 TRIM35Q9UPQ4 493 aa15.25■□□□□ 0.03
TRIM23-203ENST00000381018 DZIP1LQ8IYY4 767 aaKnown RBP15.25■□□□□ 0.03
TRIM23-203ENST00000381018 CABP1Q9NZU7 370 aa15.25■□□□□ 0.03
TRIM23-203ENST00000381018 RIMS2Q9UQ26 1411 aa15.24■□□□□ 0.03
TRIM23-203ENST00000381018 EXOSC9Q06265 439 aaKnown RBP15.24■□□□□ 0.03
TRIM23-203ENST00000381018 SMC4Q9NTJ3 1288 aa15.24■□□□□ 0.03
TRIM23-203ENST00000381018 LRRC7Q96NW7 1537 aa15.24■□□□□ 0.03
TRIM23-203ENST00000381018 USP19O94966 1318 aa15.22■□□□□ 0.03
TRIM23-203ENST00000381018 RIPK4P57078 832 aa15.22■□□□□ 0.03
TRIM23-203ENST00000381018 PDZRN3Q9UPQ7 1066 aa15.22■□□□□ 0.03
TRIM23-203ENST00000381018 NRXN3Q9Y4C0 1643 aa15.22■□□□□ 0.03
TRIM23-203ENST00000381018 FCHSD2O94868 740 aa15.2■□□□□ 0.02
TRIM23-203ENST00000381018 KNDC1Q76NI1 1749 aa15.2■□□□□ 0.02
TRIM23-203ENST00000381018 NFKBIBQ15653 356 aa15.2■□□□□ 0.02
TRIM23-203ENST00000381018 SSH1Q8WYL5 1049 aa15.2■□□□□ 0.02
TRIM23-203ENST00000381018 FAM135BQ49AJ0 1406 aa15.19■□□□□ 0.02
TRIM23-203ENST00000381018 TRIM27P14373 513 aa15.19■□□□□ 0.02
TRIM23-203ENST00000381018 SEC24BO95487 1268 aa15.18■□□□□ 0.02
TRIM23-203ENST00000381018 ATF7IPQ6VMQ6 1270 aa15.18■□□□□ 0.02
TRIM23-203ENST00000381018 WAPLQ7Z5K2 1190 aa15.18■□□□□ 0.02
TRIM23-203ENST00000381018 DDX19BQ9UMR2 479 aa15.18■□□□□ 0.02
TRIM23-203ENST00000381018 MON2Q7Z3U7 1717 aa15.18■□□□□ 0.02
TRIM23-203ENST00000381018 KIF16BQ96L93 1317 aa15.18■□□□□ 0.02
TRIM23-203ENST00000381018 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.18■□□□□ 0.02
TRIM23-203ENST00000381018 EDC4Q6P2E9 1401 aaKnown RBP15.17■□□□□ 0.02
TRIM23-203ENST00000381018 ITSN1Q15811 1721 aa15.17■□□□□ 0.02
TRIM23-203ENST00000381018 UPF2Q9HAU5 1272 aaKnown RBP15.17■□□□□ 0.02
TRIM23-203ENST00000381018 AKAP12Q02952 1782 aa15.17■□□□□ 0.02
TRIM23-203ENST00000381018 ITPRIPQ8IWB1 547 aa15.16■□□□□ 0.02
TRIM23-203ENST00000381018 RSPH6AQ9H0K4 717 aa15.16■□□□□ 0.02
TRIM23-203ENST00000381018 POLKQ9UBT6 870 aa15.16■□□□□ 0.02
TRIM23-203ENST00000381018 NOB1Q9ULX3 412 aaKnown RBP15.16■□□□□ 0.02
TRIM23-203ENST00000381018 CPSF1Q10570 1443 aaKnown RBP15.16■□□□□ 0.02
TRIM23-203ENST00000381018 PPIP5K1Q6PFW1 1433 aa15.16■□□□□ 0.02
TRIM23-203ENST00000381018 DLG5Q8TDM6 1919 aa15.16■□□□□ 0.02
TRIM23-203ENST00000381018 IPO8O15397 1037 aaKnown RBP15.16■□□□□ 0.02
TRIM23-203ENST00000381018 HDAC1Q13547 482 aaPredicted RBP15.16■□□□□ 0.02
TRIM23-203ENST00000381018 BECN1Q14457 450 aa15.16■□□□□ 0.02
TRIM23-203ENST00000381018 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.16■□□□□ 0.02
TRIM23-203ENST00000381018 CDK12Q9NYV4 1490 aaPredicted RBP15.15■□□□□ 0.02
TRIM23-203ENST00000381018 PRKAR2BP31323 418 aa15.15■□□□□ 0.02
TRIM23-203ENST00000381018 ALDH1L2Q3SY69 923 aa15.15■□□□□ 0.02
TRIM23-203ENST00000381018 WASLO00401 505 aaPredicted RBP15.14■□□□□ 0.01
TRIM23-203ENST00000381018 MLECQ14165 292 aa15.13■□□□□ 0.01
TRIM23-203ENST00000381018 ZNF428Q96B54 188 aa15.13■□□□□ 0.01
TRIM23-203ENST00000381018 CPS1P31327 1500 aa15.13■□□□□ 0.01
TRIM23-203ENST00000381018 C3P01024 1663 aa15.12■□□□□ 0.01
TRIM23-203ENST00000381018 CALD1Q05682 793 aaKnown RBP15.12■□□□□ 0.01
TRIM23-203ENST00000381018 NFE2L2Q16236 605 aa15.12■□□□□ 0.01
TRIM23-203ENST00000381018 TMEM57Q8N5G2 664 aa15.12■□□□□ 0.01
TRIM23-203ENST00000381018 TBC1D32Q96NH3 1257 aa15.12■□□□□ 0.01
TRIM23-203ENST00000381018 METP08581 1390 aa15.12■□□□□ 0.01
TRIM23-203ENST00000381018 AATKQ6ZMQ8 1374 aa15.11■□□□□ 0.01
TRIM23-203ENST00000381018 TECPR2O15040 1411 aa15.11■□□□□ 0.01
TRIM23-203ENST00000381018 KIF13AQ9H1H9 1805 aa15.11■□□□□ 0.01
TRIM23-203ENST00000381018 FBLN1P23142 703 aa15.11■□□□□ 0.01
TRIM23-203ENST00000381018 ZBTB40Q9NUA8 1239 aa15.11■□□□□ 0.01
TRIM23-203ENST00000381018 BRPF1P55201 1214 aaPredicted RBP15.1■□□□□ 0.01
TRIM23-203ENST00000381018 GSE1Q14687 1217 aa15.1■□□□□ 0.01
TRIM23-203ENST00000381018 HMOX1P09601 288 aa15.1■□□□□ 0.01
TRIM23-203ENST00000381018 NME9Q86XW9 330 aa15.1■□□□□ 0.01
TRIM23-203ENST00000381018 SMC5Q8IY18 1101 aa15.1■□□□□ 0.01
TRIM23-203ENST00000381018 SIRT1Q96EB6 747 aa15.1■□□□□ 0.01
TRIM23-203ENST00000381018 ESF1Q9H501 851 aaKnown RBP15.1■□□□□ 0.01
TRIM23-203ENST00000381018 EMILIN1Q9Y6C2 1016 aa15.1■□□□□ 0.01
TRIM23-203ENST00000381018 IL13P35225 146 aa15.09■□□□□ 0.01
TRIM23-203ENST00000381018 HDGFP51858 240 aaKnown RBP15.09■□□□□ 0.01
TRIM23-203ENST00000381018 NUDT16Q96DE0 195 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms