RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 MON2Q7Z3U7 1717 aa27.7■■■□□ 2.03
TSSC4-203ENST00000380996 TTC21AQ8NDW8 1320 aa27.7■■■□□ 2.02
TSSC4-203ENST00000380996 PSME1Q06323 249 aa27.7■■■□□ 2.02
TSSC4-203ENST00000380996 GGNBP2Q9H3C7 697 aa27.68■■■□□ 2.02
TSSC4-203ENST00000380996 SSH2Q76I76 1423 aa27.67■■■□□ 2.02
TSSC4-203ENST00000380996 FOXO3O43524 673 aa27.67■■■□□ 2.02
TSSC4-203ENST00000380996 FBXO41Q8TF61 875 aa27.67■■■□□ 2.02
TSSC4-203ENST00000380996 KIF1AQ12756 1690 aa27.66■■■□□ 2.02
TSSC4-203ENST00000380996 NLRP13Q86W25 1043 aa27.66■■■□□ 2.02
TSSC4-203ENST00000380996 NME9Q86XW9 330 aa27.64■■■□□ 2.02
TSSC4-203ENST00000380996 COG3Q96JB2 828 aa27.62■■■□□ 2.01
TSSC4-203ENST00000380996 NRKQ7Z2Y5 1582 aa27.62■■■□□ 2.01
TSSC4-203ENST00000380996 NPHP3Q7Z494 1330 aa27.62■■■□□ 2.01
TSSC4-203ENST00000380996 PPP2R1AP30153 589 aa27.62■■■□□ 2.01
TSSC4-203ENST00000380996 BRINP3Q76B58 766 aa27.62■■■□□ 2.01
TSSC4-203ENST00000380996 PAK3O75914 559 aaPredicted RBP27.61■■■□□ 2.01
TSSC4-203ENST00000380996 KRT28Q7Z3Y7 464 aa27.6■■■□□ 2.01
TSSC4-203ENST00000380996 MRS2Q9HD23 443 aa27.6■■■□□ 2.01
TSSC4-203ENST00000380996 KIF20BQ96Q89 1820 aa27.59■■■□□ 2.01
TSSC4-203ENST00000380996 TNNT2P45379 298 aaPredicted RBP27.57■■■□□ 2
TSSC4-203ENST00000380996 SCAF1Q9H7N4 1312 aaKnown RBP27.57■■■□□ 2
TSSC4-203ENST00000380996 ABTB2Q8N961 1025 aa27.57■■■□□ 2
TSSC4-203ENST00000380996 USP31Q70CQ4 1352 aa27.55■■■□□ 2
TSSC4-203ENST00000380996 ZRANB1Q9UGI0 708 aa27.55■■■□□ 2
TSSC4-203ENST00000380996 ANKRD26Q9UPS8 1709 aa27.54■■■□□ 2
TSSC4-203ENST00000380996 XPCQ01831 940 aaPredicted RBP27.54■■■□□ 2
TSSC4-203ENST00000380996 TOM1O60784 492 aa27.53■■■□□ 2
TSSC4-203ENST00000380996 NLRP6P59044 892 aa27.53■■■□□ 2
TSSC4-203ENST00000380996 CCDC184Q52MB2 194 aa27.53■■■□□ 2
TSSC4-203ENST00000380996 OVOS2A0A0J9YW53 1432 aa27.52■■■□□ 2
TSSC4-203ENST00000380996 OVOS2Q6IE36 1432 aa27.52■■■□□ 2
TSSC4-203ENST00000380996 IQSEC2Q5JU85 1478 aa27.52■■■□□ 2
TSSC4-203ENST00000380996 SBNO1A3KN83 1393 aa27.51■■■□□ 2
TSSC4-203ENST00000380996 AATKQ6ZMQ8 1374 aa27.49■■□□□ 1.99
TSSC4-203ENST00000380996 DDX17Q92841 729 aaKnown RBP27.49■■□□□ 1.99
TSSC4-203ENST00000380996 MTHFSP49914 203 aa27.47■■□□□ 1.99
TSSC4-203ENST00000380996 LMOD2Q6P5Q4 547 aa27.46■■□□□ 1.99
TSSC4-203ENST00000380996 PXDNQ92626 1479 aa27.46■■□□□ 1.99
TSSC4-203ENST00000380996 PIK3C2AO00443 1686 aa27.46■■□□□ 1.99
TSSC4-203ENST00000380996 NUTM2GQ5VZR2 741 aa27.46■■□□□ 1.99
TSSC4-203ENST00000380996 CFAP53Q96M91 514 aa27.46■■□□□ 1.99
TSSC4-203ENST00000380996 SOS2Q07890 1332 aaPredicted RBP27.45■■□□□ 1.98
TSSC4-203ENST00000380996 TRPM3Q9HCF6 1732 aaPredicted RBP27.44■■□□□ 1.98
TSSC4-203ENST00000380996 SPATA31A3Q5VYP0 1347 aa27.43■■□□□ 1.98
TSSC4-203ENST00000380996 TNS3Q68CZ2 1445 aa27.42■■□□□ 1.98
TSSC4-203ENST00000380996 POLKQ9UBT6 870 aa27.42■■□□□ 1.98
TSSC4-203ENST00000380996 UBAP1LF5GYI3 381 aa27.41■■□□□ 1.98
TSSC4-203ENST00000380996 PNISRQ8TF01 805 aaKnown RBP27.41■■□□□ 1.98
TSSC4-203ENST00000380996 ARHGEF10O15013 1369 aa27.41■■□□□ 1.98
TSSC4-203ENST00000380996 KCNH5Q8NCM2 988 aa27.41■■□□□ 1.98
TSSC4-203ENST00000380996 FAM9BQ8IZU0 186 aa27.4■■□□□ 1.98
TSSC4-203ENST00000380996 USP54Q70EL1 1684 aa27.4■■□□□ 1.98
TSSC4-203ENST00000380996 FBLN1P23142 703 aa27.38■■□□□ 1.97
TSSC4-203ENST00000380996 ROBO1Q9Y6N7 1651 aa27.38■■□□□ 1.97
TSSC4-203ENST00000380996 PPM1GO15355 546 aaPredicted RBP27.37■■□□□ 1.97
TSSC4-203ENST00000380996 SOX12O15370 315 aa27.37■■□□□ 1.97
TSSC4-203ENST00000380996 RRS1Q15050 365 aaKnown RBP27.36■■□□□ 1.97
TSSC4-203ENST00000380996 USP19O94966 1318 aa27.36■■□□□ 1.97
TSSC4-203ENST00000380996 NHSL1Q5SYE7 1610 aa27.36■■□□□ 1.97
TSSC4-203ENST00000380996 SMG6Q86US8 1419 aaKnown RBP27.36■■□□□ 1.97
TSSC4-203ENST00000380996 PIP4K2BP78356 416 aa27.36■■□□□ 1.97
TSSC4-203ENST00000380996 EMILIN1Q9Y6C2 1016 aa27.36■■□□□ 1.97
TSSC4-203ENST00000380996 ALS2Q96Q42 1657 aa27.35■■□□□ 1.97
TSSC4-203ENST00000380996 WDR43Q15061 677 aaKnown RBP eCLIP27.35■■□□□ 1.97
TSSC4-203ENST00000380996 INSRP06213 1382 aa27.34■■□□□ 1.97
TSSC4-203ENST00000380996 PNPLA6Q8IY17 1366 aa27.34■■□□□ 1.97
TSSC4-203ENST00000380996 GCP02774 474 aa27.33■■□□□ 1.97
TSSC4-203ENST00000380996 LRRC59Q96AG4 307 aaKnown RBP27.33■■□□□ 1.97
TSSC4-203ENST00000380996 AHDC1Q5TGY3 1603 aaPredicted RBP27.33■■□□□ 1.97
TSSC4-203ENST00000380996 MAP3K19Q56UN5 1328 aa27.31■■□□□ 1.96
TSSC4-203ENST00000380996 CDK12Q9NYV4 1490 aaPredicted RBP27.31■■□□□ 1.96
TSSC4-203ENST00000380996 NUDCQ9Y266 331 aa27.31■■□□□ 1.96
TSSC4-203ENST00000380996 KIF24Q5T7B8 1368 aa27.3■■□□□ 1.96
TSSC4-203ENST00000380996 SLIT3O75094 1523 aa27.3■■□□□ 1.96
TSSC4-203ENST00000380996 MARF1Q9Y4F3 1742 aaKnown RBP27.3■■□□□ 1.96
TSSC4-203ENST00000380996 AMPHP49418 695 aa27.3■■□□□ 1.96
TSSC4-203ENST00000380996 DIAPH1O60610 1272 aaKnown RBP27.29■■□□□ 1.96
TSSC4-203ENST00000380996 MAP2P11137 1827 aaKnown RBP27.29■■□□□ 1.96
TSSC4-203ENST00000380996 YTHDC1Q96MU7 727 aaKnown RBP27.29■■□□□ 1.96
TSSC4-203ENST00000380996 FLT4P35916 1363 aa27.27■■□□□ 1.96
TSSC4-203ENST00000380996 PLEKHG5O94827 1062 aa27.27■■□□□ 1.96
TSSC4-203ENST00000380996 NFAT5O94916 1531 aa27.26■■□□□ 1.95
TSSC4-203ENST00000380996 MED1Q15648 1581 aaPredicted RBP27.25■■□□□ 1.95
TSSC4-203ENST00000380996 ADAMTS8Q9UP79 889 aa27.25■■□□□ 1.95
TSSC4-203ENST00000380996 COL3A1P02461 1466 aaPredicted RBP27.25■■□□□ 1.95
TSSC4-203ENST00000380996 RTL1A6NKG5 1358 aa27.24■■□□□ 1.95
TSSC4-203ENST00000380996 ARHGEF25Q86VW2 580 aa27.24■■□□□ 1.95
TSSC4-203ENST00000380996 CABLES1Q8TDN4 633 aa27.22■■□□□ 1.95
TSSC4-203ENST00000380996 HOXC9P31274 260 aa27.21■■□□□ 1.95
TSSC4-203ENST00000380996 HAP1P54257 671 aaPredicted RBP27.21■■□□□ 1.95
TSSC4-203ENST00000380996 IP6K1Q92551 441 aa27.21■■□□□ 1.95
TSSC4-203ENST00000380996 HSP90AB2PQ58FF8 381 aa27.21■■□□□ 1.95
TSSC4-203ENST00000380996 U2SURPO15042 1029 aaKnown RBP27.2■■□□□ 1.94
TSSC4-203ENST00000380996 U2AF1L5P0DN76 240 aaPredicted RBP27.2■■□□□ 1.94
TSSC4-203ENST00000380996 IL13P35225 146 aa27.2■■□□□ 1.94
TSSC4-203ENST00000380996 U2AF1Q01081 240 aaKnown RBP eCLIP27.2■■□□□ 1.94
TSSC4-203ENST00000380996 ZBTB7CA1YPR0 619 aa27.19■■□□□ 1.94
TSSC4-203ENST00000380996 ZC3H6P61129 1189 aaKnown RBP27.19■■□□□ 1.94
TSSC4-203ENST00000380996 PHLPP1O60346 1717 aa27.18■■□□□ 1.94
TSSC4-203ENST00000380996 EIF4A2Q14240 407 aaKnown RBP27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms