RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 KIF20BQ96Q89 1820 aa18.63■□□□□ 0.57
CLCN4-201ENST00000380829 TCP11L2Q8N4U5 519 aa18.63■□□□□ 0.57
CLCN4-201ENST00000380829 WWC1Q8IX03 1113 aa18.63■□□□□ 0.57
CLCN4-201ENST00000380829 TRMT2AQ8IZ69 625 aaKnown RBP18.63■□□□□ 0.57
CLCN4-201ENST00000380829 IPO9Q96P70 1041 aaKnown RBP18.63■□□□□ 0.57
CLCN4-201ENST00000380829 FBLN1P23142 703 aa18.62■□□□□ 0.57
CLCN4-201ENST00000380829 ANP32AP39687 249 aaKnown RBP18.62■□□□□ 0.57
CLCN4-201ENST00000380829 NGEFQ8N5V2 710 aa18.62■□□□□ 0.57
CLCN4-201ENST00000380829 IQSEC2Q5JU85 1478 aa18.62■□□□□ 0.57
CLCN4-201ENST00000380829 E9PSI1 815 aa18.61■□□□□ 0.57
CLCN4-201ENST00000380829 SLIT1O75093 1534 aa18.61■□□□□ 0.57
CLCN4-201ENST00000380829 ARHGAP23Q9P227 1491 aa18.61■□□□□ 0.57
CLCN4-201ENST00000380829 CPSF1Q10570 1443 aaKnown RBP18.61■□□□□ 0.57
CLCN4-201ENST00000380829 U2SURPO15042 1029 aaKnown RBP18.61■□□□□ 0.57
CLCN4-201ENST00000380829 CCDC61Q9Y6R9 512 aa18.61■□□□□ 0.57
CLCN4-201ENST00000380829 PTPRUQ92729 1446 aa18.61■□□□□ 0.57
CLCN4-201ENST00000380829 PRR36Q9H6K5 1346 aa18.6■□□□□ 0.57
CLCN4-201ENST00000380829 COL3A1P02461 1466 aaPredicted RBP18.6■□□□□ 0.57
CLCN4-201ENST00000380829 THEMISQ8N1K5 641 aaPredicted RBP18.6■□□□□ 0.57
CLCN4-201ENST00000380829 ZBTB47Q9UFB7 747 aaPredicted RBP18.59■□□□□ 0.57
CLCN4-201ENST00000380829 NKTRP30414 1462 aaKnown RBP18.59■□□□□ 0.57
CLCN4-201ENST00000380829 NUTM2FA1L443 756 aa18.59■□□□□ 0.57
CLCN4-201ENST00000380829 C20orf194Q5TEA3 1177 aa18.59■□□□□ 0.57
CLCN4-201ENST00000380829 NME9Q86XW9 330 aa18.59■□□□□ 0.57
CLCN4-201ENST00000380829 EDC4Q6P2E9 1401 aaKnown RBP18.58■□□□□ 0.57
CLCN4-201ENST00000380829 UBE2Q2Q8WVN8 375 aa18.58■□□□□ 0.57
CLCN4-201ENST00000380829 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.58■□□□□ 0.56
CLCN4-201ENST00000380829 PPM1GO15355 546 aaPredicted RBP18.58■□□□□ 0.56
CLCN4-201ENST00000380829 ZRANB1Q9UGI0 708 aa18.58■□□□□ 0.56
CLCN4-201ENST00000380829 CRBNQ96SW2 442 aa18.57■□□□□ 0.56
CLCN4-201ENST00000380829 AMOTL2Q9Y2J4 779 aa18.57■□□□□ 0.56
CLCN4-201ENST00000380829 CDC42BPGQ6DT37 1551 aa18.57■□□□□ 0.56
CLCN4-201ENST00000380829 DIAPH1O60610 1272 aaKnown RBP18.55■□□□□ 0.56
CLCN4-201ENST00000380829 PHF23Q9BUL5 403 aaPredicted RBP18.54■□□□□ 0.56
CLCN4-201ENST00000380829 POLKQ9UBT6 870 aa18.54■□□□□ 0.56
CLCN4-201ENST00000380829 TBX22Q9Y458 520 aa18.54■□□□□ 0.56
CLCN4-201ENST00000380829 RIMS1Q86UR5 1692 aaKnown RBP18.54■□□□□ 0.56
CLCN4-201ENST00000380829 PNPLA6Q8IY17 1366 aa18.54■□□□□ 0.56
CLCN4-201ENST00000380829 ADGRB2O60241 1585 aa18.53■□□□□ 0.56
CLCN4-201ENST00000380829 PLEKHF1Q96S99 279 aa18.53■□□□□ 0.56
CLCN4-201ENST00000380829 BCAR3O75815 825 aa18.52■□□□□ 0.56
CLCN4-201ENST00000380829 MON2Q7Z3U7 1717 aa18.52■□□□□ 0.56
CLCN4-201ENST00000380829 EMILIN1Q9Y6C2 1016 aa18.52■□□□□ 0.55
CLCN4-201ENST00000380829 CEP170BQ9Y4F5 1589 aaPredicted RBP18.51■□□□□ 0.55
CLCN4-201ENST00000380829 ITSN1Q15811 1721 aa18.51■□□□□ 0.55
CLCN4-201ENST00000380829 CCDC27Q2M243 656 aa18.51■□□□□ 0.55
CLCN4-201ENST00000380829 LAS1LQ9Y4W2 734 aaKnown RBP18.51■□□□□ 0.55
CLCN4-201ENST00000380829 AKAP12Q02952 1782 aa18.51■□□□□ 0.55
CLCN4-201ENST00000380829 WDR63Q8IWG1 891 aa18.5■□□□□ 0.55
CLCN4-201ENST00000380829 COG3Q96JB2 828 aa18.5■□□□□ 0.55
CLCN4-201ENST00000380829 MAPK8IP3Q9UPT6 1336 aa18.5■□□□□ 0.55
CLCN4-201ENST00000380829 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.5■□□□□ 0.55
CLCN4-201ENST00000380829 ZNF692Q9BU19 519 aaPredicted RBP18.5■□□□□ 0.55
CLCN4-201ENST00000380829 ACEP12821 1306 aa18.49■□□□□ 0.55
CLCN4-201ENST00000380829 MAP2P11137 1827 aaKnown RBP18.49■□□□□ 0.55
CLCN4-201ENST00000380829 TMPOP42166 694 aaKnown RBP18.48■□□□□ 0.55
CLCN4-201ENST00000380829 NPM2Q86SE8 214 aaKnown RBP18.48■□□□□ 0.55
CLCN4-201ENST00000380829 PTCH1Q13635 1447 aa18.48■□□□□ 0.55
CLCN4-201ENST00000380829 RRS1Q15050 365 aaKnown RBP18.48■□□□□ 0.55
CLCN4-201ENST00000380829 DIP2AQ14689 1571 aa18.47■□□□□ 0.55
CLCN4-201ENST00000380829 NEFMP07197 916 aa18.47■□□□□ 0.55
CLCN4-201ENST00000380829 TOPAZ1Q8N9V7 1692 aa18.47■□□□□ 0.55
CLCN4-201ENST00000380829 PLEKHG3A1L390 1219 aa18.45■□□□□ 0.54
CLCN4-201ENST00000380829 KCNA6P17658 529 aa18.45■□□□□ 0.54
CLCN4-201ENST00000380829 TTC21BQ7Z4L5 1316 aa18.45■□□□□ 0.54
CLCN4-201ENST00000380829 PMFBP1Q8TBY8 1022 aa18.45■□□□□ 0.54
CLCN4-201ENST00000380829 NCBP3Q53F19 620 aaKnown RBP18.44■□□□□ 0.54
CLCN4-201ENST00000380829 TRIM35Q9UPQ4 493 aa18.44■□□□□ 0.54
CLCN4-201ENST00000380829 AATKQ6ZMQ8 1374 aa18.44■□□□□ 0.54
CLCN4-201ENST00000380829 LRRC7Q96NW7 1537 aa18.44■□□□□ 0.54
CLCN4-201ENST00000380829 HMOX1P09601 288 aa18.44■□□□□ 0.54
CLCN4-201ENST00000380829 PRKAR2BP31323 418 aa18.43■□□□□ 0.54
CLCN4-201ENST00000380829 RIPK4P57078 832 aa18.43■□□□□ 0.54
CLCN4-201ENST00000380829 BRPF3Q9ULD4 1205 aa18.43■□□□□ 0.54
CLCN4-201ENST00000380829 XRN1Q8IZH2 1706 aaKnown RBP18.43■□□□□ 0.54
CLCN4-201ENST00000380829 FCHSD2O94868 740 aa18.43■□□□□ 0.54
CLCN4-201ENST00000380829 RSPH6AQ9H0K4 717 aa18.43■□□□□ 0.54
CLCN4-201ENST00000380829 MYH16Q9H6N6 1097 aa18.43■□□□□ 0.54
CLCN4-201ENST00000380829 USP6P35125 1406 aa18.43■□□□□ 0.54
CLCN4-201ENST00000380829 NRKQ7Z2Y5 1582 aa18.43■□□□□ 0.54
CLCN4-201ENST00000380829 CDK12Q9NYV4 1490 aaPredicted RBP18.42■□□□□ 0.54
CLCN4-201ENST00000380829 TSR2Q969E8 191 aaKnown RBP18.42■□□□□ 0.54
CLCN4-201ENST00000380829 EIF5BO60841 1220 aaKnown RBP18.42■□□□□ 0.54
CLCN4-201ENST00000380829 IL13P35225 146 aa18.42■□□□□ 0.54
CLCN4-201ENST00000380829 PNNQ9H307 717 aaKnown RBP18.42■□□□□ 0.54
CLCN4-201ENST00000380829 ADAMTSL3P82987 1691 aa18.41■□□□□ 0.54
CLCN4-201ENST00000380829 RARSP54136 660 aaKnown RBP18.41■□□□□ 0.54
CLCN4-201ENST00000380829 ANKLE2Q86XL3 938 aa18.41■□□□□ 0.54
CLCN4-201ENST00000380829 CANXP27824 592 aaKnown RBP18.4■□□□□ 0.54
CLCN4-201ENST00000380829 BCL2L13Q9BXK5 485 aa18.4■□□□□ 0.54
CLCN4-201ENST00000380829 AEBP2Q6ZN18 517 aaPredicted RBP18.4■□□□□ 0.54
CLCN4-201ENST00000380829 FRAT1Q92837 279 aaPredicted RBP18.4■□□□□ 0.54
CLCN4-201ENST00000380829 RGPD8O14715 1765 aaPredicted RBP18.39■□□□□ 0.53
CLCN4-201ENST00000380829 SOX12O15370 315 aa18.39■□□□□ 0.53
CLCN4-201ENST00000380829 NGDNQ8NEJ9 315 aaKnown RBP18.39■□□□□ 0.53
CLCN4-201ENST00000380829 PHACTR3Q96KR7 559 aa18.39■□□□□ 0.53
CLCN4-201ENST00000380829 OVOS2A0A0J9YW53 1432 aa18.38■□□□□ 0.53
CLCN4-201ENST00000380829 OVOS2Q6IE36 1432 aa18.38■□□□□ 0.53
CLCN4-201ENST00000380829 RBM33Q96EV2 1170 aaKnown RBP18.37■□□□□ 0.53
CLCN4-201ENST00000380829 PIK3R4Q99570 1358 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms