RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 APAF1O14727 1248 aa28.42■■■□□ 2.14
GMDS-202ENST00000380815 NRKQ7Z2Y5 1582 aa28.41■■■□□ 2.14
GMDS-202ENST00000380815 CDCA7LQ96GN5 454 aa28.41■■■□□ 2.14
GMDS-202ENST00000380815 USP6P35125 1406 aa28.4■■■□□ 2.14
GMDS-202ENST00000380815 RNF123Q5XPI4 1314 aa28.39■■■□□ 2.14
GMDS-202ENST00000380815 ERICH6BQ5W0A0 696 aa28.39■■■□□ 2.13
GMDS-202ENST00000380815 RUNDC1Q96C34 613 aa28.39■■■□□ 2.13
GMDS-202ENST00000380815 COG3Q96JB2 828 aa28.39■■■□□ 2.13
GMDS-202ENST00000380815 AATKQ6ZMQ8 1374 aa28.38■■■□□ 2.13
GMDS-202ENST00000380815 TTC21BQ7Z4L5 1316 aa28.37■■■□□ 2.13
GMDS-202ENST00000380815 FMN2Q9NZ56 1722 aa28.37■■■□□ 2.13
GMDS-202ENST00000380815 POLKQ9UBT6 870 aa28.37■■■□□ 2.13
GMDS-202ENST00000380815 SSH2Q76I76 1423 aa28.36■■■□□ 2.13
GMDS-202ENST00000380815 U2AF1L5P0DN76 240 aaPredicted RBP28.34■■■□□ 2.13
GMDS-202ENST00000380815 U2AF1Q01081 240 aaKnown RBP eCLIP28.34■■■□□ 2.13
GMDS-202ENST00000380815 GOLGA2Q08379 1002 aa28.34■■■□□ 2.13
GMDS-202ENST00000380815 NALCNQ8IZF0 1738 aa28.34■■■□□ 2.13
GMDS-202ENST00000380815 ZRANB1Q9UGI0 708 aa28.34■■■□□ 2.13
GMDS-202ENST00000380815 RGPD8O14715 1765 aaPredicted RBP28.33■■■□□ 2.13
GMDS-202ENST00000380815 NWD1Q149M9 1564 aa28.33■■■□□ 2.13
GMDS-202ENST00000380815 DIAPH1O60610 1272 aaKnown RBP28.32■■■□□ 2.12
GMDS-202ENST00000380815 IQSEC2Q5JU85 1478 aa28.32■■■□□ 2.12
GMDS-202ENST00000380815 ADGRL3Q9HAR2 1447 aa28.32■■■□□ 2.12
GMDS-202ENST00000380815 IRX6P78412 446 aaPredicted RBP28.31■■■□□ 2.12
GMDS-202ENST00000380815 PMFBP1Q8TBY8 1022 aa28.31■■■□□ 2.12
GMDS-202ENST00000380815 MAP2P11137 1827 aaKnown RBP28.31■■■□□ 2.12
GMDS-202ENST00000380815 TTC21AQ8NDW8 1320 aa28.3■■■□□ 2.12
GMDS-202ENST00000380815 NCBP3Q53F19 620 aaKnown RBP28.3■■■□□ 2.12
GMDS-202ENST00000380815 NGDNQ8NEJ9 315 aaKnown RBP28.3■■■□□ 2.12
GMDS-202ENST00000380815 RCAN3Q9UKA8 241 aa28.3■■■□□ 2.12
GMDS-202ENST00000380815 OVOS2A0A0J9YW53 1432 aa28.29■■■□□ 2.12
GMDS-202ENST00000380815 OVOS2Q6IE36 1432 aa28.29■■■□□ 2.12
GMDS-202ENST00000380815 FBLN1P23142 703 aa28.29■■■□□ 2.12
GMDS-202ENST00000380815 CDK12Q9NYV4 1490 aaPredicted RBP28.28■■■□□ 2.12
GMDS-202ENST00000380815 TCP11L2Q8N4U5 519 aa28.28■■■□□ 2.12
GMDS-202ENST00000380815 U2SURPO15042 1029 aaKnown RBP28.27■■■□□ 2.12
GMDS-202ENST00000380815 SLFN5Q08AF3 891 aa28.27■■■□□ 2.12
GMDS-202ENST00000380815 DUSP27Q5VZP5 1158 aa28.27■■■□□ 2.12
GMDS-202ENST00000380815 PPM1GO15355 546 aaPredicted RBP28.25■■■□□ 2.11
GMDS-202ENST00000380815 TRMT2AQ8IZ69 625 aaKnown RBP28.25■■■□□ 2.11
GMDS-202ENST00000380815 EMILIN1Q9Y6C2 1016 aa28.25■■■□□ 2.11
GMDS-202ENST00000380815 WWC1Q8IX03 1113 aa28.24■■■□□ 2.11
GMDS-202ENST00000380815 PHF23Q9BUL5 403 aaPredicted RBP28.24■■■□□ 2.11
GMDS-202ENST00000380815 CCDC27Q2M243 656 aa28.24■■■□□ 2.11
GMDS-202ENST00000380815 PLEKHF1Q96S99 279 aa28.23■■■□□ 2.11
GMDS-202ENST00000380815 USP31Q70CQ4 1352 aa28.23■■■□□ 2.11
GMDS-202ENST00000380815 E9PSI1 815 aa28.22■■■□□ 2.11
GMDS-202ENST00000380815 RBM33Q96EV2 1170 aaKnown RBP28.22■■■□□ 2.11
GMDS-202ENST00000380815 PNNQ9H307 717 aaKnown RBP28.22■■■□□ 2.11
GMDS-202ENST00000380815 KDM4FA0A1W2PPD8 638 aa28.2■■■□□ 2.11
GMDS-202ENST00000380815 FCHSD2O94868 740 aa28.19■■■□□ 2.1
GMDS-202ENST00000380815 RRP1P56182 461 aaKnown RBP28.19■■■□□ 2.1
GMDS-202ENST00000380815 RRS1Q15050 365 aaKnown RBP28.19■■■□□ 2.1
GMDS-202ENST00000380815 PHF8Q9UPP1 1060 aa28.19■■■□□ 2.1
GMDS-202ENST00000380815 RRP7AQ9Y3A4 280 aaKnown RBP28.18■■■□□ 2.1
GMDS-202ENST00000380815 IL13P35225 146 aa28.17■■■□□ 2.1
GMDS-202ENST00000380815 C14orf37Q86TY3 774 aa28.17■■■□□ 2.1
GMDS-202ENST00000380815 SPINK5Q9NQ38 1064 aaPredicted RBP28.17■■■□□ 2.1
GMDS-202ENST00000380815 NEUROD2Q15784 382 aa28.16■■■□□ 2.1
GMDS-202ENST00000380815 PROSER2Q86WR7 435 aaPredicted RBP28.16■■■□□ 2.1
GMDS-202ENST00000380815 WDR63Q8IWG1 891 aa28.16■■■□□ 2.1
GMDS-202ENST00000380815 PPP4R2Q9NY27 417 aa28.16■■■□□ 2.1
GMDS-202ENST00000380815 MAPK8IP3Q9UPT6 1336 aa28.16■■■□□ 2.1
GMDS-202ENST00000380815 DMRT2Q9Y5R5 561 aa28.15■■■□□ 2.1
GMDS-202ENST00000380815 PIK3C2AO00443 1686 aa28.15■■■□□ 2.1
GMDS-202ENST00000380815 PELP1Q8IZL8 1130 aaKnown RBP28.14■■■□□ 2.1
GMDS-202ENST00000380815 RSPH6AQ9H0K4 717 aa28.12■■■□□ 2.09
GMDS-202ENST00000380815 TMPOP42166 694 aaKnown RBP28.11■■■□□ 2.09
GMDS-202ENST00000380815 HSPA2P54652 639 aa28.11■■■□□ 2.09
GMDS-202ENST00000380815 LRRC7Q96NW7 1537 aa28.11■■■□□ 2.09
GMDS-202ENST00000380815 USP54Q70EL1 1684 aa28.11■■■□□ 2.09
GMDS-202ENST00000380815 ESCO1Q5FWF5 840 aa28.1■■■□□ 2.09
GMDS-202ENST00000380815 LMTK3Q96Q04 1460 aa28.1■■■□□ 2.09
GMDS-202ENST00000380815 C19orf44Q9H6X5 657 aa28.09■■■□□ 2.09
GMDS-202ENST00000380815 NCOA3Q9Y6Q9 1424 aa28.08■■■□□ 2.09
GMDS-202ENST00000380815 NLRP6P59044 892 aa28.08■■■□□ 2.09
GMDS-202ENST00000380815 NEFMP07197 916 aa28.06■■■□□ 2.08
GMDS-202ENST00000380815 PRKAR2BP31323 418 aa28.06■■■□□ 2.08
GMDS-202ENST00000380815 PEAK1Q9H792 1746 aa28.06■■■□□ 2.08
GMDS-202ENST00000380815 ABTB2Q8N961 1025 aa28.05■■■□□ 2.08
GMDS-202ENST00000380815 MAP3K19Q56UN5 1328 aa28.04■■■□□ 2.08
GMDS-202ENST00000380815 STRCP1A6NGW2 1772 aa28.04■■■□□ 2.08
GMDS-202ENST00000380815 TRIM35Q9UPQ4 493 aa28.04■■■□□ 2.08
GMDS-202ENST00000380815 SBNO1A3KN83 1393 aa28.03■■■□□ 2.08
GMDS-202ENST00000380815 MARF1Q9Y4F3 1742 aaKnown RBP28.03■■■□□ 2.08
GMDS-202ENST00000380815 PAK3O75914 559 aaPredicted RBP28.03■■■□□ 2.08
GMDS-202ENST00000380815 HMOX1P09601 288 aa28.03■■■□□ 2.08
GMDS-202ENST00000380815 PSME1Q06323 249 aa28.03■■■□□ 2.08
GMDS-202ENST00000380815 EIF4A2Q14240 407 aaKnown RBP28.03■■■□□ 2.08
GMDS-202ENST00000380815 TMEM94Q12767 1356 aa28.02■■■□□ 2.08
GMDS-202ENST00000380815 RIPK4P57078 832 aa28.02■■■□□ 2.08
GMDS-202ENST00000380815 FLT4P35916 1363 aa28.01■■■□□ 2.08
GMDS-202ENST00000380815 MYH16Q9H6N6 1097 aa28.01■■■□□ 2.08
GMDS-202ENST00000380815 DCCP43146 1447 aa28.01■■■□□ 2.07
GMDS-202ENST00000380815 KIF24Q5T7B8 1368 aa28.01■■■□□ 2.07
GMDS-202ENST00000380815 SOX12O15370 315 aa28.01■■■□□ 2.07
GMDS-202ENST00000380815 HSP90AB2PQ58FF8 381 aa28.01■■■□□ 2.07
GMDS-202ENST00000380815 ORAI2Q96SN7 254 aa28.01■■■□□ 2.07
GMDS-202ENST00000380815 C1orf167Q5SNV9 1468 aa28■■■□□ 2.07
GMDS-202ENST00000380815 IL16Q14005 1332 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms