RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 BECN2A8MW95 431 aa15.44■□□□□ 0.06
DNMT3A-204ENST00000380756 SLC4A2P04920 1241 aa15.44■□□□□ 0.06
DNMT3A-204ENST00000380756 CCDC9Q9Y3X0 531 aaKnown RBP15.43■□□□□ 0.06
DNMT3A-204ENST00000380756 PRAG1Q86YV5 1406 aa15.43■□□□□ 0.06
DNMT3A-204ENST00000380756 GPRASP1Q5JY77 1395 aa15.43■□□□□ 0.06
DNMT3A-204ENST00000380756 PER1O15534 1290 aaPredicted RBP15.43■□□□□ 0.06
DNMT3A-204ENST00000380756 SURF6O75683 361 aaKnown RBP15.43■□□□□ 0.06
DNMT3A-204ENST00000380756 CCDC173Q0VFZ6 552 aa15.43■□□□□ 0.06
DNMT3A-204ENST00000380756 ERC2O15083 957 aa15.42■□□□□ 0.06
DNMT3A-204ENST00000380756 NFE2L2Q16236 605 aa15.42■□□□□ 0.06
DNMT3A-204ENST00000380756 RNF20Q5VTR2 975 aa15.42■□□□□ 0.06
DNMT3A-204ENST00000380756 THUMPD2Q9BTF0 503 aaKnown RBP15.42■□□□□ 0.06
DNMT3A-204ENST00000380756 CWC22Q9HCG8 908 aaKnown RBP15.42■□□□□ 0.06
DNMT3A-204ENST00000380756 POGZQ7Z3K3 1410 aa15.42■□□□□ 0.06
DNMT3A-204ENST00000380756 R3HCC1Q9Y3T6 440 aaKnown RBP15.42■□□□□ 0.06
DNMT3A-204ENST00000380756 TRIM27P14373 513 aa15.42■□□□□ 0.06
DNMT3A-204ENST00000380756 ESPNB1AK53 854 aa15.41■□□□□ 0.06
DNMT3A-204ENST00000380756 GNAI2P04899 355 aa15.41■□□□□ 0.06
DNMT3A-204ENST00000380756 G3BP1Q13283 466 aaKnown RBP eCLIP15.41■□□□□ 0.064e-6■□□□□ 9.2
DNMT3A-204ENST00000380756 CTTNBP2Q8WZ74 1663 aa15.41■□□□□ 0.06
DNMT3A-204ENST00000380756 NLRP6P59044 892 aa15.41■□□□□ 0.06
DNMT3A-204ENST00000380756 CCDC30Q5VVM6 783 aa15.41■□□□□ 0.06
DNMT3A-204ENST00000380756 TXNDC2Q86VQ3 553 aa15.41■□□□□ 0.06
DNMT3A-204ENST00000380756 RAPGEF3O95398 923 aa15.41■□□□□ 0.06
DNMT3A-204ENST00000380756 GAS2L2Q8NHY3 880 aa15.41■□□□□ 0.06
DNMT3A-204ENST00000380756 ABCC11Q96J66 1382 aa15.41■□□□□ 0.06
DNMT3A-204ENST00000380756 DDX58O95786 925 aaKnown RBP15.4■□□□□ 0.06
DNMT3A-204ENST00000380756 BICD2Q8TD16 824 aa15.4■□□□□ 0.06
DNMT3A-204ENST00000380756 NPHP1O15259 732 aa15.4■□□□□ 0.06
DNMT3A-204ENST00000380756 TBC1D32Q96NH3 1257 aa15.4■□□□□ 0.06
DNMT3A-204ENST00000380756 C8orf34Q49A92 452 aa15.39■□□□□ 0.05
DNMT3A-204ENST00000380756 CCDC39Q9UFE4 941 aa15.39■□□□□ 0.05
DNMT3A-204ENST00000380756 RNF123Q5XPI4 1314 aa15.39■□□□□ 0.05
DNMT3A-204ENST00000380756 CLASRPQ8N2M8 674 aaKnown RBP15.39■□□□□ 0.05
DNMT3A-204ENST00000380756 ALDH1L2Q3SY69 923 aa15.39■□□□□ 0.05
DNMT3A-204ENST00000380756 CHMP4CQ96CF2 233 aa15.39■□□□□ 0.05
DNMT3A-204ENST00000380756 RPAP2Q8IXW5 612 aaPredicted RBP15.39■□□□□ 0.05
DNMT3A-204ENST00000380756 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.39■□□□□ 0.05
DNMT3A-204ENST00000380756 RAPGEF6Q8TEU7 1601 aa15.38■□□□□ 0.05
DNMT3A-204ENST00000380756 CCDC34Q96HJ3 373 aa15.38■□□□□ 0.05
DNMT3A-204ENST00000380756 PCDHB15Q9Y5E8 787 aa15.38■□□□□ 0.05
DNMT3A-204ENST00000380756 ZNF692Q9BU19 519 aaPredicted RBP15.38■□□□□ 0.05
DNMT3A-204ENST00000380756 CCT4P50991 539 aaKnown RBP15.38■□□□□ 0.05
DNMT3A-204ENST00000380756 RRS1Q15050 365 aaKnown RBP15.37■□□□□ 0.05
DNMT3A-204ENST00000380756 NUTM2GQ5VZR2 741 aa15.37■□□□□ 0.05
DNMT3A-204ENST00000380756 CNTROBQ8N137 903 aa15.37■□□□□ 0.05
DNMT3A-204ENST00000380756 ATP10BO94823 1461 aa15.37■□□□□ 0.05
DNMT3A-204ENST00000380756 PZPP20742 1482 aa15.37■□□□□ 0.05
DNMT3A-204ENST00000380756 TULP1O00294 542 aaPredicted RBP15.37■□□□□ 0.05
DNMT3A-204ENST00000380756 PLEKHH1Q9ULM0 1364 aa15.37■□□□□ 0.05
DNMT3A-204ENST00000380756 TEX14Q8IWB6 1497 aa15.37■□□□□ 0.05
DNMT3A-204ENST00000380756 RTEL1-TNFRSF6BF6WH68 1400 aa15.37■□□□□ 0.05
DNMT3A-204ENST00000380756 LRRCC1Q9C099 1032 aa15.36■□□□□ 0.05
DNMT3A-204ENST00000380756 TPM2P07951 284 aa15.35■□□□□ 0.05
DNMT3A-204ENST00000380756 NUP160Q12769 1436 aa15.35■□□□□ 0.05
DNMT3A-204ENST00000380756 PSME1Q06323 249 aa15.35■□□□□ 0.05
DNMT3A-204ENST00000380756 CCDC27Q2M243 656 aa15.35■□□□□ 0.05
DNMT3A-204ENST00000380756 TSPY26PQ9H489 355 aa15.35■□□□□ 0.05
DNMT3A-204ENST00000380756 WDR62O43379 1518 aa15.34■□□□□ 0.05
DNMT3A-204ENST00000380756 ARHGEF12Q9NZN5 1544 aa15.34■□□□□ 0.05
DNMT3A-204ENST00000380756 TTC5Q8N0Z6 440 aa15.34■□□□□ 0.05
DNMT3A-204ENST00000380756 ASXL1Q8IXJ9 1541 aa15.34■□□□□ 0.05
DNMT3A-204ENST00000380756 HDGFL1Q5TGJ6 251 aa15.34■□□□□ 0.05
DNMT3A-204ENST00000380756 FIBPO43427 364 aa15.34■□□□□ 0.05
DNMT3A-204ENST00000380756 ZNF592Q92610 1267 aa15.34■□□□□ 0.05
DNMT3A-204ENST00000380756 TOMM22Q9NS69 142 aa15.34■□□□□ 0.05
DNMT3A-204ENST00000380756 CCDC61Q9Y6R9 512 aa15.34■□□□□ 0.05
DNMT3A-204ENST00000380756 SASS6Q6UVJ0 657 aa15.33■□□□□ 0.05
DNMT3A-204ENST00000380756 C14orf93Q9H972 538 aaKnown RBP15.33■□□□□ 0.05
DNMT3A-204ENST00000380756 FAM135AQ9P2D6 1515 aa15.33■□□□□ 0.04
DNMT3A-204ENST00000380756 NOS1P29475 1434 aa15.33■□□□□ 0.04
DNMT3A-204ENST00000380756 IFT57Q9NWB7 429 aa15.33■□□□□ 0.04
DNMT3A-204ENST00000380756 AIMP1Q12904 312 aaKnown RBP15.32■□□□□ 0.04
DNMT3A-204ENST00000380756 MAP7D2Q96T17 732 aa15.32■□□□□ 0.04
DNMT3A-204ENST00000380756 ITSN2Q9NZM3 1697 aa15.32■□□□□ 0.04
DNMT3A-204ENST00000380756 DCTN1Q14203 1278 aa15.32■□□□□ 0.04
DNMT3A-204ENST00000380756 LRRFIP1Q32MZ4 808 aaKnown RBP15.32■□□□□ 0.04
DNMT3A-204ENST00000380756 BMP2KLQ5H9B9 411 aa15.32■□□□□ 0.04
DNMT3A-204ENST00000380756 TNPO1Q92973 898 aaKnown RBP15.32■□□□□ 0.04
DNMT3A-204ENST00000380756 UHRF1BP1Q6BDS2 1440 aa15.32■□□□□ 0.04
DNMT3A-204ENST00000380756 CPLX2Q6PUV4 134 aaKnown RBP15.31■□□□□ 0.04
DNMT3A-204ENST00000380756 WDR33Q9C0J8 1336 aaKnown RBP15.31■□□□□ 0.04
DNMT3A-204ENST00000380756 PSMA5P28066 241 aa15.31■□□□□ 0.04
DNMT3A-204ENST00000380756 RIC3Q7Z5B4 369 aa15.31■□□□□ 0.04
DNMT3A-204ENST00000380756 EXOC6BQ9Y2D4 811 aa15.31■□□□□ 0.04
DNMT3A-204ENST00000380756 NSD2O96028 1365 aa15.3■□□□□ 0.04
DNMT3A-204ENST00000380756 CPLX1O14810 134 aa15.3■□□□□ 0.04
DNMT3A-204ENST00000380756 LETM1O95202 739 aaPredicted RBP15.3■□□□□ 0.04
DNMT3A-204ENST00000380756 PDCP20941 246 aa15.3■□□□□ 0.04
DNMT3A-204ENST00000380756 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.3■□□□□ 0.04
DNMT3A-204ENST00000380756 HDAC1Q13547 482 aaPredicted RBP15.3■□□□□ 0.04
DNMT3A-204ENST00000380756 IDI1Q13907 227 aa15.3■□□□□ 0.04
DNMT3A-204ENST00000380756 CCDC73Q6ZRK6 1079 aa15.3■□□□□ 0.04
DNMT3A-204ENST00000380756 WAPLQ7Z5K2 1190 aa15.3■□□□□ 0.04
DNMT3A-204ENST00000380756 FSD1Q9BTV5 496 aa15.3■□□□□ 0.04
DNMT3A-204ENST00000380756 SPATA31E1Q6ZUB1 1445 aa15.3■□□□□ 0.04
DNMT3A-204ENST00000380756 ABTB2Q8N961 1025 aa15.3■□□□□ 0.04
DNMT3A-204ENST00000380756 SRCIN1Q9C0H9 1055 aa15.3■□□□□ 0.04
DNMT3A-204ENST00000380756 ADGRL1O94910 1474 aa15.3■□□□□ 0.04
DNMT3A-204ENST00000380756 NUDT16Q96DE0 195 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms