RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 CARD14Q9BXL6 1004 aa17.5■□□□□ 0.39
SMN1-202ENST00000380707 SSH2Q76I76 1423 aa17.5■□□□□ 0.39
SMN1-202ENST00000380707 LRRC59Q96AG4 307 aaKnown RBP17.49■□□□□ 0.39
SMN1-202ENST00000380707 SBNO1A3KN83 1393 aa17.49■□□□□ 0.39
SMN1-202ENST00000380707 TRPM3Q9HCF6 1732 aaPredicted RBP17.49■□□□□ 0.39
SMN1-202ENST00000380707 SPATA31A3Q5VYP0 1347 aa17.48■□□□□ 0.39
SMN1-202ENST00000380707 MON2Q7Z3U7 1717 aa17.48■□□□□ 0.39
SMN1-202ENST00000380707 TTC21BQ7Z4L5 1316 aa17.47■□□□□ 0.39
SMN1-202ENST00000380707 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.47■□□□□ 0.39
SMN1-202ENST00000380707 TNS3Q68CZ2 1445 aa17.47■□□□□ 0.39
SMN1-202ENST00000380707 EDC4Q6P2E9 1401 aaKnown RBP17.47■□□□□ 0.39
SMN1-202ENST00000380707 BRD4O60885 1362 aaPredicted RBP17.47■□□□□ 0.39
SMN1-202ENST00000380707 LMOD2Q6P5Q4 547 aa17.47■□□□□ 0.39
SMN1-202ENST00000380707 NRKQ7Z2Y5 1582 aa17.46■□□□□ 0.39
SMN1-202ENST00000380707 ILDR1Q86SU0 546 aaPredicted RBP17.46■□□□□ 0.39
SMN1-202ENST00000380707 ABTB2Q8N961 1025 aa17.45■□□□□ 0.38
SMN1-202ENST00000380707 NSD3Q9BZ95 1437 aa17.44■□□□□ 0.38
SMN1-202ENST00000380707 NUTM2GQ5VZR2 741 aa17.44■□□□□ 0.38
SMN1-202ENST00000380707 ALS2Q96Q42 1657 aa17.44■□□□□ 0.38
SMN1-202ENST00000380707 TTC21AQ8NDW8 1320 aa17.43■□□□□ 0.38
SMN1-202ENST00000380707 DDX10Q13206 875 aaKnown RBP17.43■□□□□ 0.38
SMN1-202ENST00000380707 PNPLA6Q8IY17 1366 aa17.43■□□□□ 0.38
SMN1-202ENST00000380707 PER1O15534 1290 aaPredicted RBP17.42■□□□□ 0.38
SMN1-202ENST00000380707 NME9Q86XW9 330 aa17.42■□□□□ 0.38
SMN1-202ENST00000380707 ARHGEF10O15013 1369 aa17.42■□□□□ 0.38
SMN1-202ENST00000380707 JCADQ9P266 1359 aa17.42■□□□□ 0.38
SMN1-202ENST00000380707 ZRANB1Q9UGI0 708 aa17.42■□□□□ 0.38
SMN1-202ENST00000380707 PIK3C2AO00443 1686 aa17.41■□□□□ 0.38
SMN1-202ENST00000380707 FYB1O15117 783 aa17.41■□□□□ 0.38
SMN1-202ENST00000380707 PLEKHG5O94827 1062 aa17.41■□□□□ 0.38
SMN1-202ENST00000380707 NLRP6P59044 892 aa17.4■□□□□ 0.38
SMN1-202ENST00000380707 KNSTRNQ9Y448 316 aa17.4■□□□□ 0.38
SMN1-202ENST00000380707 CABLES1Q8TDN4 633 aa17.39■□□□□ 0.37
SMN1-202ENST00000380707 SHPRHQ149N8 1683 aa17.39■□□□□ 0.37
SMN1-202ENST00000380707 CGNL1Q0VF96 1302 aa17.39■□□□□ 0.37
SMN1-202ENST00000380707 NLRP13Q86W25 1043 aa17.37■□□□□ 0.37
SMN1-202ENST00000380707 GGNBP2Q9H3C7 697 aa17.37■□□□□ 0.37
SMN1-202ENST00000380707 COL22A1Q8NFW1 1626 aaPredicted RBP17.37■□□□□ 0.37
SMN1-202ENST00000380707 USP31Q70CQ4 1352 aa17.37■□□□□ 0.37
SMN1-202ENST00000380707 AMER1Q5JTC6 1135 aaPredicted RBP17.37■□□□□ 0.37
SMN1-202ENST00000380707 MED1Q15648 1581 aaPredicted RBP17.36■□□□□ 0.37
SMN1-202ENST00000380707 USP19O94966 1318 aa17.35■□□□□ 0.37
SMN1-202ENST00000380707 MARF1Q9Y4F3 1742 aaKnown RBP17.35■□□□□ 0.37
SMN1-202ENST00000380707 SPATA31A6Q5VVP1 1343 aa17.35■□□□□ 0.37
SMN1-202ENST00000380707 OVOS2A0A0J9YW53 1432 aa17.34■□□□□ 0.37
SMN1-202ENST00000380707 NUTM2BA6NNL0 878 aaPredicted RBP17.34■□□□□ 0.37
SMN1-202ENST00000380707 NUTM2EB1AL46 878 aaPredicted RBP17.34■□□□□ 0.37
SMN1-202ENST00000380707 OVOS2Q6IE36 1432 aa17.34■□□□□ 0.37
SMN1-202ENST00000380707 NUTM2AQ8IVF1 878 aaPredicted RBP17.34■□□□□ 0.37
SMN1-202ENST00000380707 COG3Q96JB2 828 aa17.34■□□□□ 0.37
SMN1-202ENST00000380707 KIF20BQ96Q89 1820 aa17.34■□□□□ 0.37
SMN1-202ENST00000380707 CRYBG1Q9Y4K1 1723 aa17.33■□□□□ 0.36
SMN1-202ENST00000380707 GCP02774 474 aa17.32■□□□□ 0.36
SMN1-202ENST00000380707 CACNB1Q02641 598 aaPredicted RBP17.32■□□□□ 0.36
SMN1-202ENST00000380707 USP54Q70EL1 1684 aa17.32■□□□□ 0.36
SMN1-202ENST00000380707 SOX12O15370 315 aa17.31■□□□□ 0.36
SMN1-202ENST00000380707 HAP1P54257 671 aaPredicted RBP17.31■□□□□ 0.36
SMN1-202ENST00000380707 CNGB1Q14028 1251 aaPredicted RBP17.31■□□□□ 0.36
SMN1-202ENST00000380707 CC2D1BQ5T0F9 858 aaKnown RBP17.31■□□□□ 0.36
SMN1-202ENST00000380707 SLIT3O75094 1523 aa17.31■□□□□ 0.36
SMN1-202ENST00000380707 ABCA3Q99758 1704 aa17.31■□□□□ 0.36
SMN1-202ENST00000380707 LRP6O75581 1613 aa17.31■□□□□ 0.36
SMN1-202ENST00000380707 PHRF1Q9P1Y6 1649 aaKnown RBP17.31■□□□□ 0.36
SMN1-202ENST00000380707 NSD2O96028 1365 aa17.3■□□□□ 0.36
SMN1-202ENST00000380707 ADAMTS2O95450 1211 aa17.3■□□□□ 0.36
SMN1-202ENST00000380707 FBLN1P23142 703 aa17.3■□□□□ 0.36
SMN1-202ENST00000380707 NPC1L1Q9UHC9 1359 aa17.3■□□□□ 0.36
SMN1-202ENST00000380707 ZC3H6P61129 1189 aaKnown RBP17.29■□□□□ 0.36
SMN1-202ENST00000380707 KCNH5Q8NCM2 988 aa17.29■□□□□ 0.36
SMN1-202ENST00000380707 NFAT5O94916 1531 aa17.28■□□□□ 0.36
SMN1-202ENST00000380707 TNNT2P45379 298 aaPredicted RBP17.27■□□□□ 0.36
SMN1-202ENST00000380707 MORC1Q86VD1 984 aa17.27■□□□□ 0.36
SMN1-202ENST00000380707 ANKRD26Q9UPS8 1709 aa17.27■□□□□ 0.35
SMN1-202ENST00000380707 KIAA0232Q92628 1395 aa17.27■□□□□ 0.35
SMN1-202ENST00000380707 CPDO75976 1380 aa17.25■□□□□ 0.35
SMN1-202ENST00000380707 FAM83GA6ND36 823 aa17.25■□□□□ 0.35
SMN1-202ENST00000380707 ARHGEF25Q86VW2 580 aa17.25■□□□□ 0.35
SMN1-202ENST00000380707 RRS1Q15050 365 aaKnown RBP17.24■□□□□ 0.35
SMN1-202ENST00000380707 PRDM11Q9NQV5 511 aa17.24■□□□□ 0.35
SMN1-202ENST00000380707 ZBTB7CA1YPR0 619 aa17.23■□□□□ 0.35
SMN1-202ENST00000380707 CHRNA2Q15822 529 aa17.23■□□□□ 0.35
SMN1-202ENST00000380707 MEX3CQ5U5Q3 659 aaKnown RBP17.23■□□□□ 0.35
SMN1-202ENST00000380707 C8orf37Q96NL8 207 aa17.23■□□□□ 0.35
SMN1-202ENST00000380707 AATKQ6ZMQ8 1374 aa17.22■□□□□ 0.35
SMN1-202ENST00000380707 MAP3K19Q56UN5 1328 aa17.22■□□□□ 0.35
SMN1-202ENST00000380707 ADRA2BP18089 450 aa17.21■□□□□ 0.35
SMN1-202ENST00000380707 NGLY1Q96IV0 654 aa17.21■□□□□ 0.34
SMN1-202ENST00000380707 POLKQ9UBT6 870 aa17.21■□□□□ 0.34
SMN1-202ENST00000380707 EMILIN1Q9Y6C2 1016 aa17.21■□□□□ 0.34
SMN1-202ENST00000380707 AXIN2Q9Y2T1 843 aa17.2■□□□□ 0.34
SMN1-202ENST00000380707 PARD3Q8TEW0 1356 aa17.2■□□□□ 0.34
SMN1-202ENST00000380707 LTN1O94822 1766 aa17.19■□□□□ 0.34
SMN1-202ENST00000380707 PPM1GO15355 546 aaPredicted RBP17.18■□□□□ 0.34
SMN1-202ENST00000380707 FNBP4Q8N3X1 1017 aaPredicted RBP17.18■□□□□ 0.34
SMN1-202ENST00000380707 BTG4Q9NY30 223 aa17.18■□□□□ 0.34
SMN1-202ENST00000380707 COL14A1Q05707 1796 aaKnown RBP17.18■□□□□ 0.34
SMN1-202ENST00000380707 AMPHP49418 695 aa17.17■□□□□ 0.34
SMN1-202ENST00000380707 MAP2P11137 1827 aaKnown RBP17.17■□□□□ 0.34
SMN1-202ENST00000380707 COL18A1P39060 1754 aa17.17■□□□□ 0.34
SMN1-202ENST00000380707 SLIT2O94813 1529 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms