RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 PRAM1Q96QH2 718 aa10.54□□□□□ -0.72
CDKL5-202ENST00000379996 ATAD2Q6PL18 1390 aa10.53□□□□□ -0.72
CDKL5-202ENST00000379996 EVC2Q86UK5 1308 aa10.53□□□□□ -0.72
CDKL5-202ENST00000379996 HSPA2P54652 639 aa10.53□□□□□ -0.72
CDKL5-202ENST00000379996 RNF123Q5XPI4 1314 aa10.53□□□□□ -0.72
CDKL5-202ENST00000379996 SMG6Q86US8 1419 aaKnown RBP10.52□□□□□ -0.73
CDKL5-202ENST00000379996 ANKRD26Q9UPS8 1709 aa10.52□□□□□ -0.73
CDKL5-202ENST00000379996 ERICH6BQ5W0A0 696 aa10.51□□□□□ -0.73
CDKL5-202ENST00000379996 CD163L1Q9NR16 1453 aa10.5□□□□□ -0.73
CDKL5-202ENST00000379996 DSG3P32926 999 aa10.5□□□□□ -0.73
CDKL5-202ENST00000379996 CLEC11AQ9Y240 323 aa10.5□□□□□ -0.73
CDKL5-202ENST00000379996 WASLO00401 505 aaPredicted RBP10.49□□□□□ -0.73
CDKL5-202ENST00000379996 HNRNPUQ00839 825 aaKnown RBP eCLIP10.49□□□□□ -0.73
CDKL5-202ENST00000379996 POGKQ9P215 609 aa10.49□□□□□ -0.73
CDKL5-202ENST00000379996 NPC1L1Q9UHC9 1359 aa10.49□□□□□ -0.73
CDKL5-202ENST00000379996 DCAF8Q5TAQ9 597 aa10.49□□□□□ -0.73
CDKL5-202ENST00000379996 BRD4O60885 1362 aaPredicted RBP10.49□□□□□ -0.73
CDKL5-202ENST00000379996 CPSF1Q10570 1443 aaKnown RBP10.49□□□□□ -0.73
CDKL5-202ENST00000379996 STK26Q9P289 416 aa10.49□□□□□ -0.73
CDKL5-202ENST00000379996 RGPD8O14715 1765 aaPredicted RBP10.48□□□□□ -0.73
CDKL5-202ENST00000379996 KIF20BQ96Q89 1820 aa10.48□□□□□ -0.73
CDKL5-202ENST00000379996 WAPLQ7Z5K2 1190 aa10.48□□□□□ -0.73
CDKL5-202ENST00000379996 MST1RQ04912 1400 aa10.48□□□□□ -0.73
CDKL5-202ENST00000379996 ANKRD36BQ8N2N9 1353 aa10.48□□□□□ -0.73
CDKL5-202ENST00000379996 POLR3AO14802 1390 aaPredicted RBP10.47□□□□□ -0.73
CDKL5-202ENST00000379996 KTN1Q86UP2 1357 aaKnown RBP10.47□□□□□ -0.73
CDKL5-202ENST00000379996 RBM19Q9Y4C8 960 aaKnown RBP10.46□□□□□ -0.73
CDKL5-202ENST00000379996 CDK19Q9BWU1 502 aa10.46□□□□□ -0.74
CDKL5-202ENST00000379996 TMEM94Q12767 1356 aa10.46□□□□□ -0.74
CDKL5-202ENST00000379996 PARD3Q8TEW0 1356 aa10.46□□□□□ -0.74
CDKL5-202ENST00000379996 TRPM3Q9HCF6 1732 aaPredicted RBP10.46□□□□□ -0.74
CDKL5-202ENST00000379996 PLEKHG3A1L390 1219 aa10.45□□□□□ -0.74
CDKL5-202ENST00000379996 NHSL1Q5SYE7 1610 aa10.45□□□□□ -0.74
CDKL5-202ENST00000379996 SSH2Q76I76 1423 aa10.45□□□□□ -0.74
CDKL5-202ENST00000379996 INSRP06213 1382 aa10.44□□□□□ -0.74
CDKL5-202ENST00000379996 PPIP5K1Q6PFW1 1433 aa10.44□□□□□ -0.74
CDKL5-202ENST00000379996 NSD2O96028 1365 aa10.44□□□□□ -0.74
CDKL5-202ENST00000379996 MINK1Q8N4C8 1332 aaPredicted RBP10.44□□□□□ -0.74
CDKL5-202ENST00000379996 C19orf44Q9H6X5 657 aa10.44□□□□□ -0.74
CDKL5-202ENST00000379996 PYGBP11216 843 aa10.43□□□□□ -0.74
CDKL5-202ENST00000379996 PRR36Q9H6K5 1346 aa10.43□□□□□ -0.74
CDKL5-202ENST00000379996 MARF1Q9Y4F3 1742 aaKnown RBP10.43□□□□□ -0.74
CDKL5-202ENST00000379996 PER1O15534 1290 aaPredicted RBP10.43□□□□□ -0.74
CDKL5-202ENST00000379996 C1orf167Q5SNV9 1468 aa10.43□□□□□ -0.74
CDKL5-202ENST00000379996 ZNF335Q9H4Z2 1342 aaPredicted RBP10.43□□□□□ -0.74
CDKL5-202ENST00000379996 PNISRQ8TF01 805 aaKnown RBP10.43□□□□□ -0.74
CDKL5-202ENST00000379996 MSH6P52701 1360 aa10.42□□□□□ -0.74
CDKL5-202ENST00000379996 NEFLP07196 543 aa10.42□□□□□ -0.74
CDKL5-202ENST00000379996 MRS2Q9HD23 443 aa10.42□□□□□ -0.74
CDKL5-202ENST00000379996 STK24Q9Y6E0 443 aa10.42□□□□□ -0.74
CDKL5-202ENST00000379996 EDC4Q6P2E9 1401 aaKnown RBP10.42□□□□□ -0.74
CDKL5-202ENST00000379996 PLEKHG5O94827 1062 aa10.42□□□□□ -0.74
CDKL5-202ENST00000379996 SSUH2Q9Y2M2 353 aa10.42□□□□□ -0.74
CDKL5-202ENST00000379996 CCDC61Q9Y6R9 512 aa10.42□□□□□ -0.74
CDKL5-202ENST00000379996 PROSER2Q86WR7 435 aaPredicted RBP10.42□□□□□ -0.74
CDKL5-202ENST00000379996 ANP32EQ9BTT0 268 aa10.42□□□□□ -0.74
CDKL5-202ENST00000379996 ZBTB12Q9Y330 459 aaPredicted RBP10.42□□□□□ -0.74
CDKL5-202ENST00000379996 BLMP54132 1417 aaPredicted RBP10.42□□□□□ -0.74
CDKL5-202ENST00000379996 ALS2Q96Q42 1657 aa10.41□□□□□ -0.74
CDKL5-202ENST00000379996 NUDT16Q96DE0 195 aaKnown RBP10.41□□□□□ -0.74
CDKL5-202ENST00000379996 BCL11BQ9C0K0 894 aaPredicted RBP10.41□□□□□ -0.74
CDKL5-202ENST00000379996 A0A1W2PP64 1363 aa10.41□□□□□ -0.74
CDKL5-202ENST00000379996 AHDC1Q5TGY3 1603 aaPredicted RBP10.41□□□□□ -0.74
CDKL5-202ENST00000379996 SPDYE2BA6NHP3 402 aa10.4□□□□□ -0.74
CDKL5-202ENST00000379996 SPDYE6P0CI01 402 aa10.4□□□□□ -0.74
CDKL5-202ENST00000379996 SPDYE2Q495Y8 402 aa10.4□□□□□ -0.74
CDKL5-202ENST00000379996 CABP2Q9NPB3 220 aa10.4□□□□□ -0.74
CDKL5-202ENST00000379996 FANCIQ9NVI1 1328 aa10.4□□□□□ -0.74
CDKL5-202ENST00000379996 CRYBG1Q9Y4K1 1723 aa10.4□□□□□ -0.74
CDKL5-202ENST00000379996 MED1Q15648 1581 aaPredicted RBP10.4□□□□□ -0.74
CDKL5-202ENST00000379996 USP6P35125 1406 aa10.4□□□□□ -0.74
CDKL5-202ENST00000379996 PHRF1Q9P1Y6 1649 aaKnown RBP10.4□□□□□ -0.75
CDKL5-202ENST00000379996 PIK3C2AO00443 1686 aa10.39□□□□□ -0.75
CDKL5-202ENST00000379996 SRPK2P78362 688 aaKnown RBP10.39□□□□□ -0.75
CDKL5-202ENST00000379996 CADPS2Q86UW7 1296 aa10.39□□□□□ -0.75
CDKL5-202ENST00000379996 PPP4R2Q9NY27 417 aa10.39□□□□□ -0.75
CDKL5-202ENST00000379996 TERF2IPQ9NYB0 399 aa10.39□□□□□ -0.75
CDKL5-202ENST00000379996 USP31Q70CQ4 1352 aa10.38□□□□□ -0.75
CDKL5-202ENST00000379996 SAFB2Q14151 953 aaKnown RBP eCLIP10.38□□□□□ -0.75
CDKL5-202ENST00000379996 PXDNQ92626 1479 aa10.37□□□□□ -0.75
CDKL5-202ENST00000379996 NSD3Q9BZ95 1437 aa10.37□□□□□ -0.75
CDKL5-202ENST00000379996 GTPBP6O43824 516 aaPredicted RBP10.37□□□□□ -0.75
CDKL5-202ENST00000379996 FAM9BQ8IZU0 186 aa10.37□□□□□ -0.75
CDKL5-202ENST00000379996 PANK3Q9H999 370 aa10.37□□□□□ -0.75
CDKL5-202ENST00000379996 COL22A1Q8NFW1 1626 aaPredicted RBP10.37□□□□□ -0.75
CDKL5-202ENST00000379996 HS6ST3Q8IZP7 471 aa10.36□□□□□ -0.75
CDKL5-202ENST00000379996 CARD14Q9BXL6 1004 aa10.36□□□□□ -0.75
CDKL5-202ENST00000379996 NUDCQ9Y266 331 aa10.36□□□□□ -0.75
CDKL5-202ENST00000379996 TTC21AQ8NDW8 1320 aa10.36□□□□□ -0.75
CDKL5-202ENST00000379996 MYBBP1AQ9BQG0 1328 aaKnown RBP10.36□□□□□ -0.75
CDKL5-202ENST00000379996 IRX6P78412 446 aaPredicted RBP10.36□□□□□ -0.75
CDKL5-202ENST00000379996 HDGFL2Q7Z4V5 671 aaPredicted RBP10.36□□□□□ -0.75
CDKL5-202ENST00000379996 ROBO1Q9Y6N7 1651 aa10.36□□□□□ -0.75
CDKL5-202ENST00000379996 CGNL1Q0VF96 1302 aa10.36□□□□□ -0.75
CDKL5-202ENST00000379996 SLIT3O75094 1523 aa10.36□□□□□ -0.75
CDKL5-202ENST00000379996 ABCC6O95255 1503 aa10.36□□□□□ -0.75
CDKL5-202ENST00000379996 C1QBPQ07021 282 aaKnown RBP10.36□□□□□ -0.75
CDKL5-202ENST00000379996 SLC12A5Q9H2X9 1139 aa10.36□□□□□ -0.75
CDKL5-202ENST00000379996 SBNO1A3KN83 1393 aa10.36□□□□□ -0.75
CDKL5-202ENST00000379996 OVOS2A0A0J9YW53 1432 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms