RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 PIK3C2GO75747 1445 aa14□□□□□ -0.17
SMAD9-202ENST00000379826 K7ELQ4 463 aaPredicted RBP14□□□□□ -0.17
SMAD9-202ENST00000379826 XRCC6P12956 609 aaKnown RBP eCLIP14□□□□□ -0.17
SMAD9-202ENST00000379826 TNPO1Q92973 898 aaKnown RBP14□□□□□ -0.17
SMAD9-202ENST00000379826 KCNJ4P48050 445 aa13.99□□□□□ -0.17
SMAD9-202ENST00000379826 COG3Q96JB2 828 aa13.99□□□□□ -0.17
SMAD9-202ENST00000379826 GNAI1P63096 354 aa13.99□□□□□ -0.17
SMAD9-202ENST00000379826 FAM13BQ9NYF5 915 aa13.99□□□□□ -0.17
SMAD9-202ENST00000379826 HMMRO75330 724 aa13.99□□□□□ -0.17
SMAD9-202ENST00000379826 TAOK2Q9UL54 1235 aa13.99□□□□□ -0.17
SMAD9-202ENST00000379826 PRPF40AO75400 957 aaKnown RBP13.99□□□□□ -0.17
SMAD9-202ENST00000379826 INTS3Q68E01 1043 aaKnown RBP13.99□□□□□ -0.17
SMAD9-202ENST00000379826 CABP1Q9NZU7 370 aa13.99□□□□□ -0.17
SMAD9-202ENST00000379826 KDM5DQ9BY66 1539 aa13.98□□□□□ -0.17
SMAD9-202ENST00000379826 TWISTNBQ3B726 338 aaPredicted RBP13.98□□□□□ -0.17
SMAD9-202ENST00000379826 API5Q9BZZ5 524 aaKnown RBP13.98□□□□□ -0.17
SMAD9-202ENST00000379826 R3HCC1Q9Y3T6 440 aaKnown RBP13.98□□□□□ -0.17
SMAD9-202ENST00000379826 TRAPPC8Q9Y2L5 1435 aa13.98□□□□□ -0.17
SMAD9-202ENST00000379826 RNF214Q8ND24 703 aa13.98□□□□□ -0.17
SMAD9-202ENST00000379826 RBM10P98175 930 aaKnown RBP13.97□□□□□ -0.17
SMAD9-202ENST00000379826 TOM1O60784 492 aa13.97□□□□□ -0.17
SMAD9-202ENST00000379826 GCC1Q96CN9 775 aa13.97□□□□□ -0.17
SMAD9-202ENST00000379826 MAST1Q9Y2H9 1570 aa13.97□□□□□ -0.17
SMAD9-202ENST00000379826 STK31Q9BXU1 1019 aa13.97□□□□□ -0.17
SMAD9-202ENST00000379826 FBLN1P23142 703 aa13.97□□□□□ -0.17
SMAD9-202ENST00000379826 ANKLE2Q86XL3 938 aa13.97□□□□□ -0.17
SMAD9-202ENST00000379826 RRAGDQ9NQL2 400 aaPredicted RBP13.97□□□□□ -0.17
SMAD9-202ENST00000379826 SSFA2P28290 1259 aa13.96□□□□□ -0.17
SMAD9-202ENST00000379826 THEMISQ8N1K5 641 aaPredicted RBP13.96□□□□□ -0.17
SMAD9-202ENST00000379826 CDK19Q9BWU1 502 aa13.96□□□□□ -0.17
SMAD9-202ENST00000379826 DRC7Q8IY82 874 aa13.96□□□□□ -0.17
SMAD9-202ENST00000379826 SYAP1Q96A49 352 aaPredicted RBP13.96□□□□□ -0.17
SMAD9-202ENST00000379826 ABCC10Q5T3U5 1492 aa13.96□□□□□ -0.17
SMAD9-202ENST00000379826 ESPNB1AK53 854 aa13.96□□□□□ -0.18
SMAD9-202ENST00000379826 CT47B1P0C2W7 299 aaPredicted RBP13.95□□□□□ -0.18
SMAD9-202ENST00000379826 KIAA2012Q0VF49 1180 aa13.95□□□□□ -0.18
SMAD9-202ENST00000379826 ZNF330Q9Y3S2 320 aaPredicted RBP13.95□□□□□ -0.18
SMAD9-202ENST00000379826 NUCB2P80303 420 aa13.95□□□□□ -0.18
SMAD9-202ENST00000379826 CROCC2H7BZ55 1655 aa13.94□□□□□ -0.18
SMAD9-202ENST00000379826 KIAA1211Q6ZU35 1233 aa13.94□□□□□ -0.18
SMAD9-202ENST00000379826 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.94□□□□□ -0.18
SMAD9-202ENST00000379826 SAMD9LQ8IVG5 1584 aa13.94□□□□□ -0.18
SMAD9-202ENST00000379826 REC8O95072 547 aa13.94□□□□□ -0.18
SMAD9-202ENST00000379826 CCDC173Q0VFZ6 552 aa13.94□□□□□ -0.18
SMAD9-202ENST00000379826 TRPM1Q7Z4N2 1603 aa13.94□□□□□ -0.18
SMAD9-202ENST00000379826 ANO2Q9NQ90 1003 aa13.94□□□□□ -0.18
SMAD9-202ENST00000379826 SMARCA5O60264 1052 aaPredicted RBP13.93□□□□□ -0.18
SMAD9-202ENST00000379826 LTV1Q96GA3 475 aaPredicted RBP13.93□□□□□ -0.18
SMAD9-202ENST00000379826 POLR3AO14802 1390 aaPredicted RBP13.93□□□□□ -0.18
SMAD9-202ENST00000379826 MPNDQ8N594 471 aa13.93□□□□□ -0.18
SMAD9-202ENST00000379826 G3V3G9 751 aa13.93□□□□□ -0.18
SMAD9-202ENST00000379826 DCAF8Q5TAQ9 597 aa13.93□□□□□ -0.18
SMAD9-202ENST00000379826 PRDM15P57071 1507 aaPredicted RBP13.93□□□□□ -0.18
SMAD9-202ENST00000379826 DCTN1Q14203 1278 aa13.93□□□□□ -0.18
SMAD9-202ENST00000379826 NAP1L2Q9ULW6 460 aaPredicted RBP13.92□□□□□ -0.18
SMAD9-202ENST00000379826 GOLGA6L4A6NEF3 574 aa13.92□□□□□ -0.18
SMAD9-202ENST00000379826 RRS1Q15050 365 aaKnown RBP13.92□□□□□ -0.18
SMAD9-202ENST00000379826 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.92□□□□□ -0.18
SMAD9-202ENST00000379826 RBM42Q9BTD8 480 aaKnown RBP13.92□□□□□ -0.18
SMAD9-202ENST00000379826 INSRP06213 1382 aa13.92□□□□□ -0.18
SMAD9-202ENST00000379826 RABEP1Q15276 862 aa13.91□□□□□ -0.18
SMAD9-202ENST00000379826 TBC1D9Q6ZT07 1266 aa13.91□□□□□ -0.18
SMAD9-202ENST00000379826 ZNF521Q96K83 1311 aa13.91□□□□□ -0.18
SMAD9-202ENST00000379826 CHAF1AQ13111 956 aaPredicted RBP13.91□□□□□ -0.18
SMAD9-202ENST00000379826 CDC42BPAQ5VT25 1732 aa13.91□□□□□ -0.18
SMAD9-202ENST00000379826 ARHGEF5Q12774 1597 aa13.91□□□□□ -0.18
SMAD9-202ENST00000379826 PLCH2O75038 1416 aa13.9□□□□□ -0.18
SMAD9-202ENST00000379826 ADGRL1O94910 1474 aa13.9□□□□□ -0.18
SMAD9-202ENST00000379826 NUCB1Q02818 461 aa13.9□□□□□ -0.18
SMAD9-202ENST00000379826 PSME1Q06323 249 aa13.9□□□□□ -0.18
SMAD9-202ENST00000379826 WDR7Q9Y4E6 1490 aa13.9□□□□□ -0.18
SMAD9-202ENST00000379826 NEK4P51957 841 aa13.9□□□□□ -0.18
SMAD9-202ENST00000379826 HDAC1Q13547 482 aaPredicted RBP13.89□□□□□ -0.19
SMAD9-202ENST00000379826 TRMT2AQ8IZ69 625 aaKnown RBP13.89□□□□□ -0.19
SMAD9-202ENST00000379826 TXNDC2Q86VQ3 553 aa13.89□□□□□ -0.19
SMAD9-202ENST00000379826 C14orf93Q9H972 538 aaKnown RBP13.89□□□□□ -0.19
SMAD9-202ENST00000379826 PLA2R1Q13018 1463 aa13.89□□□□□ -0.19
SMAD9-202ENST00000379826 AMPHP49418 695 aa13.89□□□□□ -0.19
SMAD9-202ENST00000379826 KDM5AP29375 1690 aaKnown RBP13.89□□□□□ -0.19
SMAD9-202ENST00000379826 CHMP3Q9Y3E7 222 aa13.88□□□□□ -0.19
SMAD9-202ENST00000379826 CIZ1Q9ULV3 898 aaPredicted RBP13.88□□□□□ -0.19
SMAD9-202ENST00000379826 RAPGEF3O95398 923 aa13.88□□□□□ -0.19
SMAD9-202ENST00000379826 TSPYL4Q9UJ04 414 aa13.88□□□□□ -0.19
SMAD9-202ENST00000379826 PHF14O94880 888 aa13.88□□□□□ -0.19
SMAD9-202ENST00000379826 FGD1P98174 961 aa13.88□□□□□ -0.19
SMAD9-202ENST00000379826 FCHSD2O94868 740 aa13.87□□□□□ -0.19
SMAD9-202ENST00000379826 MAP4K4O95819 1239 aaPredicted RBP13.87□□□□□ -0.19
SMAD9-202ENST00000379826 FKBP5Q13451 457 aaPredicted RBP13.87□□□□□ -0.19
SMAD9-202ENST00000379826 UBE2Q2Q8WVN8 375 aa13.87□□□□□ -0.19
SMAD9-202ENST00000379826 NFE2L2Q16236 605 aa13.87□□□□□ -0.19
SMAD9-202ENST00000379826 SYTL4Q96C24 671 aaPredicted RBP13.87□□□□□ -0.19
SMAD9-202ENST00000379826 MIS18AQ9NYP9 233 aa13.87□□□□□ -0.19
SMAD9-202ENST00000379826 FANCAO15360 1455 aa13.87□□□□□ -0.19
SMAD9-202ENST00000379826 EMILIN1Q9Y6C2 1016 aa13.87□□□□□ -0.19
SMAD9-202ENST00000379826 TPM2P07951 284 aa13.86□□□□□ -0.19
SMAD9-202ENST00000379826 ALDH1L2Q3SY69 923 aa13.86□□□□□ -0.19
SMAD9-202ENST00000379826 FAM83GA6ND36 823 aa13.86□□□□□ -0.19
SMAD9-202ENST00000379826 SLC4A2P04920 1241 aa13.86□□□□□ -0.19
SMAD9-202ENST00000379826 CCDC27Q2M243 656 aa13.86□□□□□ -0.19
SMAD9-202ENST00000379826 WAPLQ7Z5K2 1190 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms