RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 WWC1Q8IX03 1113 aa19.76■□□□□ 0.75
SNX2-201ENST00000379516 SPINK5Q9NQ38 1064 aaPredicted RBP19.76■□□□□ 0.75
SNX2-201ENST00000379516 RRP7AQ9Y3A4 280 aaKnown RBP19.76■□□□□ 0.75
SNX2-201ENST00000379516 ADAMTSL3P82987 1691 aa19.76■□□□□ 0.75
SNX2-201ENST00000379516 E9PSI1 815 aa19.76■□□□□ 0.75
SNX2-201ENST00000379516 TRMT2AQ8IZ69 625 aaKnown RBP19.76■□□□□ 0.75
SNX2-201ENST00000379516 FBLN1P23142 703 aa19.75■□□□□ 0.75
SNX2-201ENST00000379516 ANKLE2Q86XL3 938 aa19.75■□□□□ 0.75
SNX2-201ENST00000379516 COL3A1P02461 1466 aaPredicted RBP19.75■□□□□ 0.75
SNX2-201ENST00000379516 TSHZ2Q9NRE2 1034 aa19.75■□□□□ 0.75
SNX2-201ENST00000379516 PPM1GO15355 546 aaPredicted RBP19.74■□□□□ 0.75
SNX2-201ENST00000379516 DIAPH1O60610 1272 aaKnown RBP19.74■□□□□ 0.75
SNX2-201ENST00000379516 POLKQ9UBT6 870 aa19.74■□□□□ 0.75
SNX2-201ENST00000379516 ZRANB1Q9UGI0 708 aa19.74■□□□□ 0.75
SNX2-201ENST00000379516 DMRT2Q9Y5R5 561 aa19.74■□□□□ 0.75
SNX2-201ENST00000379516 IQSEC2Q5JU85 1478 aa19.73■□□□□ 0.75
SNX2-201ENST00000379516 PNPLA6Q8IY17 1366 aa19.73■□□□□ 0.75
SNX2-201ENST00000379516 PLIN1O60240 522 aa19.73■□□□□ 0.75
SNX2-201ENST00000379516 COG3Q96JB2 828 aa19.73■□□□□ 0.75
SNX2-201ENST00000379516 ACEP12821 1306 aa19.72■□□□□ 0.75
SNX2-201ENST00000379516 PLEKHG3A1L390 1219 aa19.72■□□□□ 0.75
SNX2-201ENST00000379516 KCNA6P17658 529 aa19.72■□□□□ 0.75
SNX2-201ENST00000379516 CCDC136Q96JN2 1154 aa19.72■□□□□ 0.75
SNX2-201ENST00000379516 MON2Q7Z3U7 1717 aa19.71■□□□□ 0.75
SNX2-201ENST00000379516 PIK3R4Q99570 1358 aa19.71■□□□□ 0.75
SNX2-201ENST00000379516 EXOC6Q8TAG9 804 aa19.7■□□□□ 0.74
SNX2-201ENST00000379516 ITSN1Q15811 1721 aa19.7■□□□□ 0.74
SNX2-201ENST00000379516 NKTRP30414 1462 aaKnown RBP19.7■□□□□ 0.74
SNX2-201ENST00000379516 AKAP12Q02952 1782 aa19.7■□□□□ 0.74
SNX2-201ENST00000379516 PHF23Q9BUL5 403 aaPredicted RBP19.69■□□□□ 0.74
SNX2-201ENST00000379516 CCDC27Q2M243 656 aa19.69■□□□□ 0.74
SNX2-201ENST00000379516 XRN1Q8IZH2 1706 aaKnown RBP19.69■□□□□ 0.74
SNX2-201ENST00000379516 PLEKHF1Q96S99 279 aa19.69■□□□□ 0.74
SNX2-201ENST00000379516 EMILIN1Q9Y6C2 1016 aa19.69■□□□□ 0.74
SNX2-201ENST00000379516 ZNF142P52746 1687 aaPredicted RBP19.68■□□□□ 0.74
SNX2-201ENST00000379516 TOPAZ1Q8N9V7 1692 aa19.68■□□□□ 0.74
SNX2-201ENST00000379516 TTC21BQ7Z4L5 1316 aa19.68■□□□□ 0.74
SNX2-201ENST00000379516 WDR63Q8IWG1 891 aa19.67■□□□□ 0.74
SNX2-201ENST00000379516 NCBP3Q53F19 620 aaKnown RBP19.67■□□□□ 0.74
SNX2-201ENST00000379516 PMFBP1Q8TBY8 1022 aa19.67■□□□□ 0.74
SNX2-201ENST00000379516 AATKQ6ZMQ8 1374 aa19.67■□□□□ 0.74
SNX2-201ENST00000379516 MAPK8IP3Q9UPT6 1336 aa19.66■□□□□ 0.74
SNX2-201ENST00000379516 PNNQ9H307 717 aaKnown RBP19.66■□□□□ 0.74
SNX2-201ENST00000379516 USP6P35125 1406 aa19.65■□□□□ 0.74
SNX2-201ENST00000379516 RRS1Q15050 365 aaKnown RBP19.64■□□□□ 0.74
SNX2-201ENST00000379516 TMPOP42166 694 aaKnown RBP19.63■□□□□ 0.73
SNX2-201ENST00000379516 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.63■□□□□ 0.73
SNX2-201ENST00000379516 NGDNQ8NEJ9 315 aaKnown RBP19.63■□□□□ 0.73
SNX2-201ENST00000379516 SETD1BQ9UPS6 1966 aaKnown RBP19.63■□□□□ 0.73
SNX2-201ENST00000379516 MAP2P11137 1827 aaKnown RBP19.63■□□□□ 0.73
SNX2-201ENST00000379516 FCHSD2O94868 740 aa19.62■□□□□ 0.73
SNX2-201ENST00000379516 CRBNQ96SW2 442 aa19.62■□□□□ 0.73
SNX2-201ENST00000379516 C20orf194Q5TEA3 1177 aa19.61■□□□□ 0.73
SNX2-201ENST00000379516 NRKQ7Z2Y5 1582 aa19.61■□□□□ 0.73
SNX2-201ENST00000379516 CDK12Q9NYV4 1490 aaPredicted RBP19.61■□□□□ 0.73
SNX2-201ENST00000379516 IL13P35225 146 aa19.6■□□□□ 0.73
SNX2-201ENST00000379516 BCAR3O75815 825 aa19.59■□□□□ 0.73
SNX2-201ENST00000379516 RSPH6AQ9H0K4 717 aa19.59■□□□□ 0.73
SNX2-201ENST00000379516 SSH2Q76I76 1423 aa19.59■□□□□ 0.73
SNX2-201ENST00000379516 OVOS2A0A0J9YW53 1432 aa19.58■□□□□ 0.73
SNX2-201ENST00000379516 NEFMP07197 916 aa19.58■□□□□ 0.73
SNX2-201ENST00000379516 HMOX1P09601 288 aa19.58■□□□□ 0.73
SNX2-201ENST00000379516 PRKAR2BP31323 418 aa19.58■□□□□ 0.73
SNX2-201ENST00000379516 RIPK4P57078 832 aa19.58■□□□□ 0.73
SNX2-201ENST00000379516 OVOS2Q6IE36 1432 aa19.58■□□□□ 0.73
SNX2-201ENST00000379516 ANKARQ7Z5J8 1434 aa19.58■□□□□ 0.73
SNX2-201ENST00000379516 MYH16Q9H6N6 1097 aa19.58■□□□□ 0.73
SNX2-201ENST00000379516 TRIM35Q9UPQ4 493 aa19.58■□□□□ 0.73
SNX2-201ENST00000379516 NPHP4O75161 1426 aaPredicted RBP19.58■□□□□ 0.72
SNX2-201ENST00000379516 TTC21AQ8NDW8 1320 aa19.58■□□□□ 0.72
SNX2-201ENST00000379516 RBM33Q96EV2 1170 aaKnown RBP19.57■□□□□ 0.72
SNX2-201ENST00000379516 CHD2O14647 1828 aaKnown RBP19.57■□□□□ 0.72
SNX2-201ENST00000379516 LRRC7Q96NW7 1537 aa19.56■□□□□ 0.72
SNX2-201ENST00000379516 RGPD8O14715 1765 aaPredicted RBP19.55■□□□□ 0.72
SNX2-201ENST00000379516 SOX12O15370 315 aa19.54■□□□□ 0.72
SNX2-201ENST00000379516 USP31Q70CQ4 1352 aa19.53■□□□□ 0.72
SNX2-201ENST00000379516 FMN2Q9NZ56 1722 aa19.53■□□□□ 0.72
SNX2-201ENST00000379516 PHACTR3Q96KR7 559 aa19.52■□□□□ 0.72
SNX2-201ENST00000379516 RARSP54136 660 aaKnown RBP19.51■□□□□ 0.71
SNX2-201ENST00000379516 TSR2Q969E8 191 aaKnown RBP19.51■□□□□ 0.71
SNX2-201ENST00000379516 EIF4A2Q14240 407 aaKnown RBP19.51■□□□□ 0.71
SNX2-201ENST00000379516 NALCNQ8IZF0 1738 aa19.5■□□□□ 0.71
SNX2-201ENST00000379516 IL16Q14005 1332 aa19.5■□□□□ 0.71
SNX2-201ENST00000379516 FANCIQ9NVI1 1328 aa19.5■□□□□ 0.71
SNX2-201ENST00000379516 CANXP27824 592 aaKnown RBP19.5■□□□□ 0.71
SNX2-201ENST00000379516 NFE2L2Q16236 605 aa19.5■□□□□ 0.71
SNX2-201ENST00000379516 C14orf37Q86TY3 774 aa19.49■□□□□ 0.71
SNX2-201ENST00000379516 RBM19Q9Y4C8 960 aaKnown RBP19.49■□□□□ 0.71
SNX2-201ENST00000379516 PHF8Q9UPP1 1060 aa19.49■□□□□ 0.71
SNX2-201ENST00000379516 NLRP6P59044 892 aa19.48■□□□□ 0.71
SNX2-201ENST00000379516 HSP90AB2PQ58FF8 381 aa19.48■□□□□ 0.71
SNX2-201ENST00000379516 ADGRL3Q9HAR2 1447 aa19.48■□□□□ 0.71
SNX2-201ENST00000379516 FRAT1Q92837 279 aaPredicted RBP19.48■□□□□ 0.71
SNX2-201ENST00000379516 PAK3O75914 559 aaPredicted RBP19.47■□□□□ 0.71
SNX2-201ENST00000379516 MAP3K19Q56UN5 1328 aa19.47■□□□□ 0.71
SNX2-201ENST00000379516 EXOSC9Q06265 439 aaKnown RBP19.46■□□□□ 0.71
SNX2-201ENST00000379516 PDE3AQ14432 1141 aa19.46■□□□□ 0.71
SNX2-201ENST00000379516 NUTM2GQ5VZR2 741 aa19.46■□□□□ 0.71
SNX2-201ENST00000379516 CT47B1P0C2W7 299 aaPredicted RBP19.45■□□□□ 0.7
SNX2-201ENST00000379516 ESCO1Q5FWF5 840 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms