RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 SPATA31A3Q5VYP0 1347 aa16.56■□□□□ 0.24
PCNA-201ENST00000379143 ARHGEF10O15013 1369 aa16.55■□□□□ 0.24
PCNA-201ENST00000379143 SLC12A5Q9H2X9 1139 aa16.55■□□□□ 0.24
PCNA-201ENST00000379143 USP6P35125 1406 aa16.55■□□□□ 0.24
PCNA-201ENST00000379143 UPF1Q92900 1129 aaKnown RBP eCLIP16.54■□□□□ 0.24
PCNA-201ENST00000379143 SPATA31A6Q5VVP1 1343 aa16.54■□□□□ 0.24
PCNA-201ENST00000379143 KTN1Q86UP2 1357 aaKnown RBP16.53■□□□□ 0.24
PCNA-201ENST00000379143 PNPLA6Q8IY17 1366 aa16.53■□□□□ 0.24
PCNA-201ENST00000379143 PAK3O75914 559 aaPredicted RBP16.53■□□□□ 0.24
PCNA-201ENST00000379143 MON2Q7Z3U7 1717 aa16.53■□□□□ 0.24
PCNA-201ENST00000379143 CD163L1Q9NR16 1453 aa16.53■□□□□ 0.24
PCNA-201ENST00000379143 COL22A1Q8NFW1 1626 aaPredicted RBP16.53■□□□□ 0.24
PCNA-201ENST00000379143 ANKRD36BQ8N2N9 1353 aa16.53■□□□□ 0.24
PCNA-201ENST00000379143 ALS2Q96Q42 1657 aa16.52■□□□□ 0.24
PCNA-201ENST00000379143 MYOM1P52179 1685 aa16.52■□□□□ 0.23
PCNA-201ENST00000379143 POLR3GLQ9BT43 218 aa16.51■□□□□ 0.23
PCNA-201ENST00000379143 A0A1W2PP64 1363 aa16.51■□□□□ 0.23
PCNA-201ENST00000379143 C11orf95C9JLR9 678 aaPredicted RBP16.5■□□□□ 0.23
PCNA-201ENST00000379143 ZNF772Q68DY9 489 aaPredicted RBP16.5■□□□□ 0.23
PCNA-201ENST00000379143 LMOD2Q6P5Q4 547 aa16.5■□□□□ 0.23
PCNA-201ENST00000379143 TTC21AQ8NDW8 1320 aa16.5■□□□□ 0.23
PCNA-201ENST00000379143 NRKQ7Z2Y5 1582 aa16.5■□□□□ 0.23
PCNA-201ENST00000379143 EDC4Q6P2E9 1401 aaKnown RBP16.5■□□□□ 0.23
PCNA-201ENST00000379143 SSH2Q76I76 1423 aa16.5■□□□□ 0.23
PCNA-201ENST00000379143 KIF7Q2M1P5 1343 aa16.49■□□□□ 0.23
PCNA-201ENST00000379143 MEX3CQ5U5Q3 659 aaKnown RBP16.48■□□□□ 0.23
PCNA-201ENST00000379143 ABTB2Q8N961 1025 aa16.48■□□□□ 0.23
PCNA-201ENST00000379143 TTC21BQ7Z4L5 1316 aa16.47■□□□□ 0.23
PCNA-201ENST00000379143 CDK12Q9NYV4 1490 aaPredicted RBP16.47■□□□□ 0.23
PCNA-201ENST00000379143 CCDC7Q96M83 1385 aa16.46■□□□□ 0.23
PCNA-201ENST00000379143 NLRP13Q86W25 1043 aa16.45■□□□□ 0.22
PCNA-201ENST00000379143 HAP1P54257 671 aaPredicted RBP16.45■□□□□ 0.22
PCNA-201ENST00000379143 WASHC2AQ641Q2 1341 aa16.44■□□□□ 0.22
PCNA-201ENST00000379143 PIK3C2AO00443 1686 aa16.44■□□□□ 0.22
PCNA-201ENST00000379143 NUTM2BA6NNL0 878 aaPredicted RBP16.44■□□□□ 0.22
PCNA-201ENST00000379143 NUTM2EB1AL46 878 aaPredicted RBP16.44■□□□□ 0.22
PCNA-201ENST00000379143 RXRBP28702 533 aa16.44■□□□□ 0.22
PCNA-201ENST00000379143 NLRP6P59044 892 aa16.44■□□□□ 0.22
PCNA-201ENST00000379143 NUTM2AQ8IVF1 878 aaPredicted RBP16.44■□□□□ 0.22
PCNA-201ENST00000379143 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.44■□□□□ 0.22
PCNA-201ENST00000379143 SRCAPQ6ZRS2 3230 aa16.43■□□□□ 0.22
PCNA-201ENST00000379143 ABCA3Q99758 1704 aa16.42■□□□□ 0.22
PCNA-201ENST00000379143 CRYBG1Q9Y4K1 1723 aa16.42■□□□□ 0.22
PCNA-201ENST00000379143 NSD3Q9BZ95 1437 aa16.41■□□□□ 0.22
PCNA-201ENST00000379143 USP31Q70CQ4 1352 aa16.41■□□□□ 0.22
PCNA-201ENST00000379143 USP19O94966 1318 aa16.41■□□□□ 0.22
PCNA-201ENST00000379143 USP54Q70EL1 1684 aa16.41■□□□□ 0.22
PCNA-201ENST00000379143 NUTM2GQ5VZR2 741 aa16.41■□□□□ 0.22
PCNA-201ENST00000379143 PPP4R3CPQ6ZMV5 832 aa16.41■□□□□ 0.22
PCNA-201ENST00000379143 CARD14Q9BXL6 1004 aa16.41■□□□□ 0.22
PCNA-201ENST00000379143 PANK3Q9H999 370 aa16.41■□□□□ 0.22
PCNA-201ENST00000379143 PHRF1Q9P1Y6 1649 aaKnown RBP16.41■□□□□ 0.22
PCNA-201ENST00000379143 MARF1Q9Y4F3 1742 aaKnown RBP16.4■□□□□ 0.22
PCNA-201ENST00000379143 CABLES1Q8TDN4 633 aa16.4■□□□□ 0.22
PCNA-201ENST00000379143 AFF2P51816 1311 aa16.39■□□□□ 0.21
PCNA-201ENST00000379143 CGNL1Q0VF96 1302 aa16.39■□□□□ 0.21
PCNA-201ENST00000379143 NME9Q86XW9 330 aa16.39■□□□□ 0.21
PCNA-201ENST00000379143 KCNH5Q8NCM2 988 aa16.39■□□□□ 0.21
PCNA-201ENST00000379143 SLIT3O75094 1523 aa16.38■□□□□ 0.21
PCNA-201ENST00000379143 PLEKHG5O94827 1062 aa16.38■□□□□ 0.21
PCNA-201ENST00000379143 ADAMTS2O95450 1211 aa16.38■□□□□ 0.21
PCNA-201ENST00000379143 GCP02774 474 aa16.38■□□□□ 0.21
PCNA-201ENST00000379143 KIF20BQ96Q89 1820 aa16.38■□□□□ 0.21
PCNA-201ENST00000379143 RGS12O14924 1447 aa16.38■□□□□ 0.21
PCNA-201ENST00000379143 COG3Q96JB2 828 aa16.37■□□□□ 0.21
PCNA-201ENST00000379143 OVOS2A0A0J9YW53 1432 aa16.36■□□□□ 0.21
PCNA-201ENST00000379143 FYB1O15117 783 aa16.36■□□□□ 0.21
PCNA-201ENST00000379143 OVOS2Q6IE36 1432 aa16.36■□□□□ 0.21
PCNA-201ENST00000379143 KNSTRNQ9Y448 316 aa16.36■□□□□ 0.21
PCNA-201ENST00000379143 C8orf37Q96NL8 207 aa16.35■□□□□ 0.21
PCNA-201ENST00000379143 CPDO75976 1380 aa16.35■□□□□ 0.21
PCNA-201ENST00000379143 NSD2O96028 1365 aa16.35■□□□□ 0.21
PCNA-201ENST00000379143 NGLY1Q96IV0 654 aa16.34■□□□□ 0.21
PCNA-201ENST00000379143 GGNBP2Q9H3C7 697 aa16.33■□□□□ 0.2
PCNA-201ENST00000379143 PRDM11Q9NQV5 511 aa16.33■□□□□ 0.2
PCNA-201ENST00000379143 ZRANB1Q9UGI0 708 aa16.33■□□□□ 0.2
PCNA-201ENST00000379143 COL14A1Q05707 1796 aaKnown RBP16.33■□□□□ 0.2
PCNA-201ENST00000379143 ZC3H6P61129 1189 aaKnown RBP16.32■□□□□ 0.2
PCNA-201ENST00000379143 KIAA0232Q92628 1395 aa16.32■□□□□ 0.2
PCNA-201ENST00000379143 NFAT5O94916 1531 aa16.32■□□□□ 0.2
PCNA-201ENST00000379143 PER1O15534 1290 aaPredicted RBP16.31■□□□□ 0.2
PCNA-201ENST00000379143 RBM6P78332 1123 aaKnown RBP16.31■□□□□ 0.2
PCNA-201ENST00000379143 FNBP4Q8N3X1 1017 aaPredicted RBP16.31■□□□□ 0.2
PCNA-201ENST00000379143 NWD2Q9ULI1 1742 aa16.31■□□□□ 0.2
PCNA-201ENST00000379143 ANKRD26Q9UPS8 1709 aa16.31■□□□□ 0.2
PCNA-201ENST00000379143 FAM83GA6ND36 823 aa16.3■□□□□ 0.2
PCNA-201ENST00000379143 ZNF316A6NFI3 1004 aaPredicted RBP16.3■□□□□ 0.2
PCNA-201ENST00000379143 QTRT2Q9H974 415 aaKnown RBP16.3■□□□□ 0.2
PCNA-201ENST00000379143 PLCH1Q4KWH8 1693 aa16.3■□□□□ 0.2
PCNA-201ENST00000379143 EP400Q96L91 3159 aa16.3■□□□□ 0.2
PCNA-201ENST00000379143 SLIT2O94813 1529 aa16.29■□□□□ 0.2
PCNA-201ENST00000379143 SOX12O15370 315 aa16.29■□□□□ 0.2
PCNA-201ENST00000379143 AATKQ6ZMQ8 1374 aa16.28■□□□□ 0.2
PCNA-201ENST00000379143 ABCC6O95255 1503 aa16.28■□□□□ 0.2
PCNA-201ENST00000379143 AMER1Q5JTC6 1135 aaPredicted RBP16.28■□□□□ 0.2
PCNA-201ENST00000379143 ARHGEF25Q86VW2 580 aa16.28■□□□□ 0.2
PCNA-201ENST00000379143 USP21Q9UK80 565 aa16.28■□□□□ 0.2
PCNA-201ENST00000379143 NPC1L1Q9UHC9 1359 aa16.28■□□□□ 0.2
PCNA-201ENST00000379143 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.27■□□□□ 0.2
PCNA-201ENST00000379143 MAPK8IP2Q13387 824 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms