RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 RUNDC1Q96C34 613 aa20.34■□□□□ 0.85
RAB3IP-204ENST00000378815 ACEP12821 1306 aa20.33■□□□□ 0.85
RAB3IP-204ENST00000378815 NUTM2FA1L443 756 aa20.32■□□□□ 0.84
RAB3IP-204ENST00000378815 CHD2O14647 1828 aaKnown RBP20.32■□□□□ 0.84
RAB3IP-204ENST00000378815 NPHP4O75161 1426 aaPredicted RBP20.32■□□□□ 0.84
RAB3IP-204ENST00000378815 GOLGA2Q08379 1002 aa20.32■□□□□ 0.84
RAB3IP-204ENST00000378815 RCAN3Q9UKA8 241 aa20.32■□□□□ 0.84
RAB3IP-204ENST00000378815 NRKQ7Z2Y5 1582 aa20.32■□□□□ 0.84
RAB3IP-204ENST00000378815 IQSEC2Q5JU85 1478 aa20.32■□□□□ 0.84
RAB3IP-204ENST00000378815 USP6P35125 1406 aa20.3■□□□□ 0.84
RAB3IP-204ENST00000378815 POLKQ9UBT6 870 aa20.3■□□□□ 0.84
RAB3IP-204ENST00000378815 AATKQ6ZMQ8 1374 aa20.3■□□□□ 0.84
RAB3IP-204ENST00000378815 ZRANB1Q9UGI0 708 aa20.3■□□□□ 0.84
RAB3IP-204ENST00000378815 ANKARQ7Z5J8 1434 aa20.29■□□□□ 0.84
RAB3IP-204ENST00000378815 U2AF1L5P0DN76 240 aaPredicted RBP20.29■□□□□ 0.84
RAB3IP-204ENST00000378815 U2AF1Q01081 240 aaKnown RBP eCLIP20.29■□□□□ 0.84
RAB3IP-204ENST00000378815 DUSP27Q5VZP5 1158 aa20.29■□□□□ 0.84
RAB3IP-204ENST00000378815 TTC21BQ7Z4L5 1316 aa20.29■□□□□ 0.84
RAB3IP-204ENST00000378815 COG3Q96JB2 828 aa20.29■□□□□ 0.84
RAB3IP-204ENST00000378815 SLFN5Q08AF3 891 aa20.28■□□□□ 0.84
RAB3IP-204ENST00000378815 SSH2Q76I76 1423 aa20.28■□□□□ 0.84
RAB3IP-204ENST00000378815 TRMT2AQ8IZ69 625 aaKnown RBP20.28■□□□□ 0.84
RAB3IP-204ENST00000378815 TCP11L2Q8N4U5 519 aa20.27■□□□□ 0.84
RAB3IP-204ENST00000378815 DIAPH1O60610 1272 aaKnown RBP20.27■□□□□ 0.83
RAB3IP-204ENST00000378815 FBLN1P23142 703 aa20.27■□□□□ 0.83
RAB3IP-204ENST00000378815 NCBP3Q53F19 620 aaKnown RBP20.26■□□□□ 0.83
RAB3IP-204ENST00000378815 RRP1P56182 461 aaKnown RBP20.26■□□□□ 0.83
RAB3IP-204ENST00000378815 WWC1Q8IX03 1113 aa20.26■□□□□ 0.83
RAB3IP-204ENST00000378815 PHF23Q9BUL5 403 aaPredicted RBP20.26■□□□□ 0.83
RAB3IP-204ENST00000378815 PPP4R2Q9NY27 417 aa20.26■□□□□ 0.83
RAB3IP-204ENST00000378815 FMN2Q9NZ56 1722 aa20.25■□□□□ 0.83
RAB3IP-204ENST00000378815 OVOS2A0A0J9YW53 1432 aa20.24■□□□□ 0.83
RAB3IP-204ENST00000378815 OVOS2Q6IE36 1432 aa20.24■□□□□ 0.83
RAB3IP-204ENST00000378815 U2SURPO15042 1029 aaKnown RBP20.24■□□□□ 0.83
RAB3IP-204ENST00000378815 CDK12Q9NYV4 1490 aaPredicted RBP20.24■□□□□ 0.83
RAB3IP-204ENST00000378815 PELP1Q8IZL8 1130 aaKnown RBP20.23■□□□□ 0.83
RAB3IP-204ENST00000378815 PMFBP1Q8TBY8 1022 aa20.23■□□□□ 0.83
RAB3IP-204ENST00000378815 PLEKHF1Q96S99 279 aa20.23■□□□□ 0.83
RAB3IP-204ENST00000378815 SPINK5Q9NQ38 1064 aaPredicted RBP20.23■□□□□ 0.83
RAB3IP-204ENST00000378815 NALCNQ8IZF0 1738 aa20.23■□□□□ 0.83
RAB3IP-204ENST00000378815 E9PSI1 815 aa20.23■□□□□ 0.83
RAB3IP-204ENST00000378815 CCDC27Q2M243 656 aa20.23■□□□□ 0.83
RAB3IP-204ENST00000378815 EMILIN1Q9Y6C2 1016 aa20.23■□□□□ 0.83
RAB3IP-204ENST00000378815 MAP2P11137 1827 aaKnown RBP20.22■□□□□ 0.83
RAB3IP-204ENST00000378815 TTC21AQ8NDW8 1320 aa20.22■□□□□ 0.83
RAB3IP-204ENST00000378815 RGPD8O14715 1765 aaPredicted RBP20.22■□□□□ 0.83
RAB3IP-204ENST00000378815 PPM1GO15355 546 aaPredicted RBP20.22■□□□□ 0.83
RAB3IP-204ENST00000378815 DMRT2Q9Y5R5 561 aa20.22■□□□□ 0.83
RAB3IP-204ENST00000378815 NGDNQ8NEJ9 315 aaKnown RBP20.21■□□□□ 0.83
RAB3IP-204ENST00000378815 RRP7AQ9Y3A4 280 aaKnown RBP20.21■□□□□ 0.83
RAB3IP-204ENST00000378815 ADGRL3Q9HAR2 1447 aa20.21■□□□□ 0.83
RAB3IP-204ENST00000378815 NWD1Q149M9 1564 aa20.2■□□□□ 0.82
RAB3IP-204ENST00000378815 USP31Q70CQ4 1352 aa20.19■□□□□ 0.82
RAB3IP-204ENST00000378815 NEUROD2Q15784 382 aa20.19■□□□□ 0.82
RAB3IP-204ENST00000378815 RRS1Q15050 365 aaKnown RBP20.18■□□□□ 0.82
RAB3IP-204ENST00000378815 WDR63Q8IWG1 891 aa20.18■□□□□ 0.82
RAB3IP-204ENST00000378815 FCHSD2O94868 740 aa20.17■□□□□ 0.82
RAB3IP-204ENST00000378815 PNNQ9H307 717 aaKnown RBP20.17■□□□□ 0.82
RAB3IP-204ENST00000378815 IL13P35225 146 aa20.17■□□□□ 0.82
RAB3IP-204ENST00000378815 RBM33Q96EV2 1170 aaKnown RBP20.17■□□□□ 0.82
RAB3IP-204ENST00000378815 TMPOP42166 694 aaKnown RBP20.15■□□□□ 0.82
RAB3IP-204ENST00000378815 RSPH6AQ9H0K4 717 aa20.15■□□□□ 0.82
RAB3IP-204ENST00000378815 MAPK8IP3Q9UPT6 1336 aa20.15■□□□□ 0.82
RAB3IP-204ENST00000378815 LRRC7Q96NW7 1537 aa20.14■□□□□ 0.81
RAB3IP-204ENST00000378815 PIK3C2AO00443 1686 aa20.12■□□□□ 0.81
RAB3IP-204ENST00000378815 PHF8Q9UPP1 1060 aa20.12■□□□□ 0.81
RAB3IP-204ENST00000378815 B4GALNT3Q6L9W6 998 aa20.11■□□□□ 0.81
RAB3IP-204ENST00000378815 PRKAR2BP31323 418 aa20.1■□□□□ 0.81
RAB3IP-204ENST00000378815 TRIM35Q9UPQ4 493 aa20.1■□□□□ 0.81
RAB3IP-204ENST00000378815 PLIN1O60240 522 aa20.09■□□□□ 0.81
RAB3IP-204ENST00000378815 C14orf37Q86TY3 774 aa20.08■□□□□ 0.81
RAB3IP-204ENST00000378815 PEAK1Q9H792 1746 aa20.08■□□□□ 0.81
RAB3IP-204ENST00000378815 HMOX1P09601 288 aa20.08■□□□□ 0.8
RAB3IP-204ENST00000378815 PROSER2Q86WR7 435 aaPredicted RBP20.07■□□□□ 0.8
RAB3IP-204ENST00000378815 EXOC6Q8TAG9 804 aa20.07■□□□□ 0.8
RAB3IP-204ENST00000378815 USP54Q70EL1 1684 aa20.07■□□□□ 0.8
RAB3IP-204ENST00000378815 KDM4FA0A1W2PPD8 638 aa20.07■□□□□ 0.8
RAB3IP-204ENST00000378815 RIPK4P57078 832 aa20.07■□□□□ 0.8
RAB3IP-204ENST00000378815 EIF4A2Q14240 407 aaKnown RBP20.07■□□□□ 0.8
RAB3IP-204ENST00000378815 MYH16Q9H6N6 1097 aa20.07■□□□□ 0.8
RAB3IP-204ENST00000378815 MAP3K19Q56UN5 1328 aa20.06■□□□□ 0.8
RAB3IP-204ENST00000378815 NLRP6P59044 892 aa20.06■□□□□ 0.8
RAB3IP-204ENST00000378815 NEFMP07197 916 aa20.05■□□□□ 0.8
RAB3IP-204ENST00000378815 ESCO1Q5FWF5 840 aa20.05■□□□□ 0.8
RAB3IP-204ENST00000378815 PHACTR3Q96KR7 559 aa20.05■□□□□ 0.8
RAB3IP-204ENST00000378815 IL16Q14005 1332 aa20.05■□□□□ 0.8
RAB3IP-204ENST00000378815 MARF1Q9Y4F3 1742 aaKnown RBP20.04■□□□□ 0.8
RAB3IP-204ENST00000378815 HSPA2P54652 639 aa20.04■□□□□ 0.8
RAB3IP-204ENST00000378815 HSP90AB2PQ58FF8 381 aa20.04■□□□□ 0.8
RAB3IP-204ENST00000378815 SBNO1A3KN83 1393 aa20.04■□□□□ 0.8
RAB3IP-204ENST00000378815 SOX12O15370 315 aa20.03■□□□□ 0.8
RAB3IP-204ENST00000378815 ABTB2Q8N961 1025 aa20.03■□□□□ 0.8
RAB3IP-204ENST00000378815 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.03■□□□□ 0.8
RAB3IP-204ENST00000378815 NFE2L2Q16236 605 aa20.03■□□□□ 0.8
RAB3IP-204ENST00000378815 CCDC136Q96JN2 1154 aa20.03■□□□□ 0.8
RAB3IP-204ENST00000378815 FLT4P35916 1363 aa20.03■□□□□ 0.8
RAB3IP-204ENST00000378815 C19orf44Q9H6X5 657 aa20.02■□□□□ 0.8
RAB3IP-204ENST00000378815 PAK3O75914 559 aaPredicted RBP20.02■□□□□ 0.8
RAB3IP-204ENST00000378815 C20orf194Q5TEA3 1177 aa20.02■□□□□ 0.8
RAB3IP-204ENST00000378815 BCAR3O75815 825 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms