RNA–Protein interactions for RNA: ENST00000378800.3

CCL19-202, Transcript of C-C motif chemokine ligand 19, humanhuman

TSL 2 BASIC

Gene CCL19, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19-202ENST00000378800 QRICH2Q9H0J4 1663 aa18.73■□□□□ 0.59
CCL19-202ENST00000378800 FAM83GA6ND36 823 aa18.72■□□□□ 0.59
CCL19-202ENST00000378800 ABTB2Q8N961 1025 aa18.7■□□□□ 0.58
CCL19-202ENST00000378800 BCL9LQ86UU0 1499 aa18.69■□□□□ 0.58
CCL19-202ENST00000378800 RBM6P78332 1123 aaKnown RBP18.68■□□□□ 0.58
CCL19-202ENST00000378800 SLC12A5Q9H2X9 1139 aa18.68■□□□□ 0.58
CCL19-202ENST00000378800 TRPM3Q9HCF6 1732 aaPredicted RBP18.68■□□□□ 0.58
CCL19-202ENST00000378800 ATAD2Q6PL18 1390 aa18.68■□□□□ 0.58
CCL19-202ENST00000378800 UNC5CLQ8IV45 518 aa18.67■□□□□ 0.58
CCL19-202ENST00000378800 ZNF692Q9BU19 519 aaPredicted RBP18.67■□□□□ 0.58
CCL19-202ENST00000378800 TRPC5Q9UL62 973 aaPredicted RBP18.67■□□□□ 0.58
CCL19-202ENST00000378800 USP47Q96K76 1375 aa18.67■□□□□ 0.58
CCL19-202ENST00000378800 TOPAZ1Q8N9V7 1692 aa18.66■□□□□ 0.58
CCL19-202ENST00000378800 TMC1Q8TDI8 760 aa18.66■□□□□ 0.58
CCL19-202ENST00000378800 PUS7Q96PZ0 661 aaKnown RBP18.66■□□□□ 0.58
CCL19-202ENST00000378800 USP6P35125 1406 aa18.66■□□□□ 0.58
CCL19-202ENST00000378800 SSH2Q76I76 1423 aa18.65■□□□□ 0.58
CCL19-202ENST00000378800 TTC21BQ7Z4L5 1316 aa18.64■□□□□ 0.57
CCL19-202ENST00000378800 ATRNO75882 1429 aa18.64■□□□□ 0.57
CCL19-202ENST00000378800 CPSF1Q10570 1443 aaKnown RBP18.64■□□□□ 0.57
CCL19-202ENST00000378800 SLIT2O94813 1529 aa18.64■□□□□ 0.57
CCL19-202ENST00000378800 ALS2Q96Q42 1657 aa18.63■□□□□ 0.57
CCL19-202ENST00000378800 NLRP6P59044 892 aa18.63■□□□□ 0.57
CCL19-202ENST00000378800 ZC3H6P61129 1189 aaKnown RBP18.63■□□□□ 0.57
CCL19-202ENST00000378800 NLRP13Q86W25 1043 aa18.63■□□□□ 0.57
CCL19-202ENST00000378800 BRD4O60885 1362 aaPredicted RBP18.63■□□□□ 0.57
CCL19-202ENST00000378800 ITSN1Q15811 1721 aa18.63■□□□□ 0.57
CCL19-202ENST00000378800 SLC24A1O60721 1099 aa18.62■□□□□ 0.57
CCL19-202ENST00000378800 GJD4Q96KN9 370 aaPredicted RBP18.62■□□□□ 0.57
CCL19-202ENST00000378800 USP19O94966 1318 aa18.61■□□□□ 0.57
CCL19-202ENST00000378800 GCP02774 474 aa18.61■□□□□ 0.57
CCL19-202ENST00000378800 CHRNA2Q15822 529 aa18.61■□□□□ 0.57
CCL19-202ENST00000378800 PRDM11Q9NQV5 511 aa18.61■□□□□ 0.57
CCL19-202ENST00000378800 BTG4Q9NY30 223 aa18.61■□□□□ 0.57
CCL19-202ENST00000378800 KTN1Q86UP2 1357 aaKnown RBP18.6■□□□□ 0.57
CCL19-202ENST00000378800 KIAA0232Q92628 1395 aa18.6■□□□□ 0.57
CCL19-202ENST00000378800 TMF1P82094 1093 aa18.6■□□□□ 0.57
CCL19-202ENST00000378800 VPS72Q15906 364 aa18.59■□□□□ 0.57
CCL19-202ENST00000378800 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.59■□□□□ 0.57
CCL19-202ENST00000378800 ZRANB1Q9UGI0 708 aa18.59■□□□□ 0.57
CCL19-202ENST00000378800 CD163L1Q9NR16 1453 aa18.58■□□□□ 0.57
CCL19-202ENST00000378800 HDGFL2Q7Z4V5 671 aaPredicted RBP18.58■□□□□ 0.56
CCL19-202ENST00000378800 TERF2IPQ9NYB0 399 aa18.57■□□□□ 0.56
CCL19-202ENST00000378800 CDK12Q9NYV4 1490 aaPredicted RBP18.57■□□□□ 0.56
CCL19-202ENST00000378800 TTC21AQ8NDW8 1320 aa18.56■□□□□ 0.56
CCL19-202ENST00000378800 RGS12O14924 1447 aa18.56■□□□□ 0.56
CCL19-202ENST00000378800 HSPA5P11021 654 aaKnown RBP18.55■□□□□ 0.56
CCL19-202ENST00000378800 NME9Q86XW9 330 aa18.55■□□□□ 0.56
CCL19-202ENST00000378800 CCDC9Q9Y3X0 531 aaKnown RBP18.55■□□□□ 0.56
CCL19-202ENST00000378800 A0A1W2PP64 1363 aa18.54■□□□□ 0.56
CCL19-202ENST00000378800 EIF4G2P78344 907 aaKnown RBP eCLIP18.53■□□□□ 0.56
CCL19-202ENST00000378800 ABCA3Q99758 1704 aa18.53■□□□□ 0.56
CCL19-202ENST00000378800 CPDO75976 1380 aa18.53■□□□□ 0.56
CCL19-202ENST00000378800 ZBTB7CA1YPR0 619 aa18.52■□□□□ 0.56
CCL19-202ENST00000378800 ONECUT3O60422 494 aaPredicted RBP18.52■□□□□ 0.56
CCL19-202ENST00000378800 MARF1Q9Y4F3 1742 aaKnown RBP18.52■□□□□ 0.55
CCL19-202ENST00000378800 SOX12O15370 315 aa18.51■□□□□ 0.55
CCL19-202ENST00000378800 CDCA8Q53HL2 280 aa18.51■□□□□ 0.55
CCL19-202ENST00000378800 STRN4Q9NRL3 753 aa18.51■□□□□ 0.55
CCL19-202ENST00000378800 CRYBG1Q9Y4K1 1723 aa18.5■□□□□ 0.55
CCL19-202ENST00000378800 EVA1CP58658 441 aa18.5■□□□□ 0.55
CCL19-202ENST00000378800 UPF1Q92900 1129 aaKnown RBP eCLIP18.5■□□□□ 0.55
CCL19-202ENST00000378800 NINLQ9Y2I6 1382 aa18.5■□□□□ 0.55
CCL19-202ENST00000378800 SPATA31A5Q5VU36 1347 aa18.49■□□□□ 0.55
CCL19-202ENST00000378800 SPATA31A7Q8IWB4 1347 aa18.49■□□□□ 0.55
CCL19-202ENST00000378800 ARHGEF25Q86VW2 580 aa18.49■□□□□ 0.55
CCL19-202ENST00000378800 SEPT12Q8IYM1 358 aa18.49■□□□□ 0.55
CCL19-202ENST00000378800 USP31Q70CQ4 1352 aa18.49■□□□□ 0.55
CCL19-202ENST00000378800 EDC4Q6P2E9 1401 aaKnown RBP18.49■□□□□ 0.55
CCL19-202ENST00000378800 FAM98CQ17RN3 349 aaKnown RBP18.48■□□□□ 0.55
CCL19-202ENST00000378800 KCNH5Q8NCM2 988 aa18.48■□□□□ 0.55
CCL19-202ENST00000378800 AXIN2Q9Y2T1 843 aa18.48■□□□□ 0.55
CCL19-202ENST00000378800 GLI3P10071 1580 aa18.47■□□□□ 0.55
CCL19-202ENST00000378800 LARP1Q6PKG0 1096 aaKnown RBP18.47■□□□□ 0.55
CCL19-202ENST00000378800 CARD14Q9BXL6 1004 aa18.47■□□□□ 0.55
CCL19-202ENST00000378800 SLIT3O75094 1523 aa18.47■□□□□ 0.55
CCL19-202ENST00000378800 COL14A1Q05707 1796 aaKnown RBP18.47■□□□□ 0.55
CCL19-202ENST00000378800 PIK3C2AO00443 1686 aa18.47■□□□□ 0.55
CCL19-202ENST00000378800 NRKQ7Z2Y5 1582 aa18.47■□□□□ 0.55
CCL19-202ENST00000378800 AATKQ6ZMQ8 1374 aa18.46■□□□□ 0.55
CCL19-202ENST00000378800 ANKRD36BQ8N2N9 1353 aa18.46■□□□□ 0.55
CCL19-202ENST00000378800 PHRF1Q9P1Y6 1649 aaKnown RBP18.46■□□□□ 0.55
CCL19-202ENST00000378800 C11orf95C9JLR9 678 aaPredicted RBP18.46■□□□□ 0.55
CCL19-202ENST00000378800 CAMTA1Q9Y6Y1 1673 aa18.46■□□□□ 0.55
CCL19-202ENST00000378800 SPATA31A1Q5TZJ5 1347 aa18.46■□□□□ 0.55
CCL19-202ENST00000378800 PLCH1Q4KWH8 1693 aa18.44■□□□□ 0.54
CCL19-202ENST00000378800 FYB1O15117 783 aa18.44■□□□□ 0.54
CCL19-202ENST00000378800 POLR3GLQ9BT43 218 aa18.44■□□□□ 0.54
CCL19-202ENST00000378800 AKAP12Q02952 1782 aa18.44■□□□□ 0.54
CCL19-202ENST00000378800 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.43■□□□□ 0.54
CCL19-202ENST00000378800 FBLN1P23142 703 aa18.43■□□□□ 0.54
CCL19-202ENST00000378800 USP35Q9P2H5 1018 aa18.43■□□□□ 0.54
CCL19-202ENST00000378800 NWD2Q9ULI1 1742 aa18.43■□□□□ 0.54
CCL19-202ENST00000378800 A0A0G2JS52 829 aa18.41■□□□□ 0.54
CCL19-202ENST00000378800 MYT1Q01538 1121 aa18.41■□□□□ 0.54
CCL19-202ENST00000378800 KRT27Q7Z3Y8 459 aa18.4■□□□□ 0.54
CCL19-202ENST00000378800 COG3Q96JB2 828 aa18.4■□□□□ 0.54
CCL19-202ENST00000378800 GGNBP2Q9H3C7 697 aa18.4■□□□□ 0.54
CCL19-202ENST00000378800 MON2Q7Z3U7 1717 aa18.4■□□□□ 0.54
CCL19-202ENST00000378800 NRAPQ86VF7 1730 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms