RNA–Protein interactions for RNA: ENST00000378735.5

KIF3A-201, Transcript of kinesin family member 3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KIF3A, Length 3,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-201ENST00000378735 TNNQ9UQP3 1299 aa17.08■□□□□ 0.32
KIF3A-201ENST00000378735 MCM5P33992 734 aa17.07■□□□□ 0.32
KIF3A-201ENST00000378735 CSPP1Q1MSJ5 1256 aa17.06■□□□□ 0.32
KIF3A-201ENST00000378735 MROH1Q8NDA8 1641 aa17.06■□□□□ 0.32
KIF3A-201ENST00000378735 DYNC1I1O14576 645 aa17.06■□□□□ 0.32
KIF3A-201ENST00000378735 FTSJ3Q8IY81 847 aaKnown RBP17.06■□□□□ 0.32
KIF3A-201ENST00000378735 DDX19BQ9UMR2 479 aa17.06■□□□□ 0.32
KIF3A-201ENST00000378735 KIF16BQ96L93 1317 aa17.05■□□□□ 0.32
KIF3A-201ENST00000378735 LMTK2Q8IWU2 1503 aa17.05■□□□□ 0.32
KIF3A-201ENST00000378735 PDLIM2Q96JY6 352 aa17.05■□□□□ 0.32
KIF3A-201ENST00000378735 TCP11L2Q8N4U5 519 aa17.05■□□□□ 0.32
KIF3A-201ENST00000378735 NEURL4Q96JN8 1562 aa17.05■□□□□ 0.32
KIF3A-201ENST00000378735 TRPM2O94759 1503 aa17.04■□□□□ 0.32
KIF3A-201ENST00000378735 ERVK-7P63135 1459 aa17.04■□□□□ 0.32
KIF3A-201ENST00000378735 K7ELQ4 463 aaPredicted RBP17.04■□□□□ 0.32
KIF3A-201ENST00000378735 DIP2BQ9P265 1576 aa17.03■□□□□ 0.32
KIF3A-201ENST00000378735 PTPRTO14522 1441 aa17.03■□□□□ 0.32
KIF3A-201ENST00000378735 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.03■□□□□ 0.32
KIF3A-201ENST00000378735 CARD14Q9BXL6 1004 aa17.02■□□□□ 0.32
KIF3A-201ENST00000378735 R3HCC1Q9Y3T6 440 aaKnown RBP17.02■□□□□ 0.32
KIF3A-201ENST00000378735 RICTORQ6R327 1708 aa17.02■□□□□ 0.32
KIF3A-201ENST00000378735 RBM10P98175 930 aaKnown RBP17.02■□□□□ 0.32
KIF3A-201ENST00000378735 DDX49Q9Y6V7 483 aaKnown RBP17.02■□□□□ 0.32
KIF3A-201ENST00000378735 KIF2CQ99661 725 aa17.02■□□□□ 0.31
KIF3A-201ENST00000378735 FAM13BQ9NYF5 915 aa17.02■□□□□ 0.31
KIF3A-201ENST00000378735 NUCB1Q02818 461 aa17.01■□□□□ 0.31
KIF3A-201ENST00000378735 BMP2KLQ5H9B9 411 aa17.01■□□□□ 0.31
KIF3A-201ENST00000378735 BCL2L13Q9BXK5 485 aa17.01■□□□□ 0.31
KIF3A-201ENST00000378735 CYB5RLQ6IPT4 315 aa17.01■□□□□ 0.31
KIF3A-201ENST00000378735 REREQ9P2R6 1566 aa17■□□□□ 0.31
KIF3A-201ENST00000378735 UQCRHLA0A096LP55 91 aa17■□□□□ 0.31
KIF3A-201ENST00000378735 BAG4O95429 457 aaKnown RBP17■□□□□ 0.31
KIF3A-201ENST00000378735 UQCRHP07919 91 aa17■□□□□ 0.31
KIF3A-201ENST00000378735 ADGRB2O60241 1585 aa17■□□□□ 0.31
KIF3A-201ENST00000378735 MYO3AQ8NEV4 1616 aa17■□□□□ 0.31
KIF3A-201ENST00000378735 FRMPD1Q5SYB0 1578 aa17■□□□□ 0.31
KIF3A-201ENST00000378735 USP32Q8NFA0 1604 aa17■□□□□ 0.31
KIF3A-201ENST00000378735 SBNO2Q9Y2G9 1366 aa17■□□□□ 0.31
KIF3A-201ENST00000378735 ABCA6Q8N139 1617 aa16.99■□□□□ 0.31
KIF3A-201ENST00000378735 UTP14CQ5TAP6 766 aaKnown RBP16.99■□□□□ 0.31
KIF3A-201ENST00000378735 ZKSCAN5Q9Y2L8 839 aa16.99■□□□□ 0.31
KIF3A-201ENST00000378735 EFCAB6Q5THR3 1501 aa16.98■□□□□ 0.31
KIF3A-201ENST00000378735 SSFA2P28290 1259 aa16.98■□□□□ 0.31
KIF3A-201ENST00000378735 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.98■□□□□ 0.31
KIF3A-201ENST00000378735 NEUROD2Q15784 382 aa16.97■□□□□ 0.31
KIF3A-201ENST00000378735 SASS6Q6UVJ0 657 aa16.97■□□□□ 0.31
KIF3A-201ENST00000378735 RRP7AQ9Y3A4 280 aaKnown RBP16.97■□□□□ 0.31
KIF3A-201ENST00000378735 TRIM27P14373 513 aa16.97■□□□□ 0.31
KIF3A-201ENST00000378735 NUCB2P80303 420 aa16.97■□□□□ 0.31
KIF3A-201ENST00000378735 ATF7IPQ6VMQ6 1270 aa16.96■□□□□ 0.31
KIF3A-201ENST00000378735 ZBTB40Q9NUA8 1239 aa16.96■□□□□ 0.31
KIF3A-201ENST00000378735 DIP2CQ9Y2E4 1556 aa16.96■□□□□ 0.3
KIF3A-201ENST00000378735 ZSCAN23Q3MJ62 389 aa16.95■□□□□ 0.3
KIF3A-201ENST00000378735 CLTCL1P53675 1640 aa16.95■□□□□ 0.3
KIF3A-201ENST00000378735 MORC1Q86VD1 984 aa16.95■□□□□ 0.3
KIF3A-201ENST00000378735 CHD1LQ86WJ1 897 aa16.95■□□□□ 0.3
KIF3A-201ENST00000378735 ITPRIPQ8IWB1 547 aa16.94■□□□□ 0.3
KIF3A-201ENST00000378735 CFAP53Q96M91 514 aa16.94■□□□□ 0.3
KIF3A-201ENST00000378735 CCDC39Q9UFE4 941 aa16.94■□□□□ 0.3
KIF3A-201ENST00000378735 KIF3BO15066 747 aa16.94■□□□□ 0.3
KIF3A-201ENST00000378735 SMC4Q9NTJ3 1288 aa16.94■□□□□ 0.3
KIF3A-201ENST00000378735 MYOM2P54296 1465 aa16.94■□□□□ 0.3
KIF3A-201ENST00000378735 GAS2L2Q8NHY3 880 aa16.94■□□□□ 0.3
KIF3A-201ENST00000378735 PPRC1Q5VV67 1664 aaKnown RBP16.93■□□□□ 0.3
KIF3A-201ENST00000378735 CD2BP2O95400 341 aaKnown RBP16.93■□□□□ 0.3
KIF3A-201ENST00000378735 CFAP44Q96MT7 982 aa16.93■□□□□ 0.3
KIF3A-201ENST00000378735 CCDC94Q9BW85 323 aaPredicted RBP16.93■□□□□ 0.3
KIF3A-201ENST00000378735 ABCC11Q96J66 1382 aa16.93■□□□□ 0.3
KIF3A-201ENST00000378735 NOS1P29475 1434 aa16.93■□□□□ 0.3
KIF3A-201ENST00000378735 CYP2E1P05181 493 aaPredicted RBP16.92■□□□□ 0.3
KIF3A-201ENST00000378735 LMBRD1Q9NUN5 540 aa16.92■□□□□ 0.3
KIF3A-201ENST00000378735 XPCQ01831 940 aaPredicted RBP16.92■□□□□ 0.3
KIF3A-201ENST00000378735 RBSNQ9H1K0 784 aa16.92■□□□□ 0.3
KIF3A-201ENST00000378735 ZC3H13Q5T200 1668 aaKnown RBP16.92■□□□□ 0.3
KIF3A-201ENST00000378735 NSD3Q9BZ95 1437 aa16.91■□□□□ 0.3
KIF3A-201ENST00000378735 IPO8O15397 1037 aaKnown RBP16.91■□□□□ 0.3
KIF3A-201ENST00000378735 DMTNQ08495 405 aa16.91■□□□□ 0.3
KIF3A-201ENST00000378735 IL16Q14005 1332 aa16.91■□□□□ 0.3
KIF3A-201ENST00000378735 GCC1Q96CN9 775 aa16.9■□□□□ 0.3
KIF3A-201ENST00000378735 CWC22Q9HCG8 908 aaKnown RBP16.9■□□□□ 0.3
KIF3A-201ENST00000378735 CAVIN1Q6NZI2 390 aaKnown RBP16.9■□□□□ 0.3
KIF3A-201ENST00000378735 RABEP1Q15276 862 aa16.9■□□□□ 0.3
KIF3A-201ENST00000378735 SSH1Q8WYL5 1049 aa16.89■□□□□ 0.29
KIF3A-201ENST00000378735 CHMP4BQ9H444 224 aaKnown RBP16.89■□□□□ 0.29
KIF3A-201ENST00000378735 LNPKQ9C0E8 428 aa16.89■□□□□ 0.29
KIF3A-201ENST00000378735 MCTP1Q6DN14 999 aa16.88■□□□□ 0.29
KIF3A-201ENST00000378735 TBC1D9Q6ZT07 1266 aa16.88■□□□□ 0.29
KIF3A-201ENST00000378735 TMEM57Q8N5G2 664 aa16.88■□□□□ 0.29
KIF3A-201ENST00000378735 FOXD4L1Q9NU39 408 aa16.88■□□□□ 0.29
KIF3A-201ENST00000378735 MED14O60244 1454 aa16.88■□□□□ 0.29
KIF3A-201ENST00000378735 NCLP19338 710 aaKnown RBP16.88■□□□□ 0.29
KIF3A-201ENST00000378735 LRSAM1Q6UWE0 723 aa16.88■□□□□ 0.29
KIF3A-201ENST00000378735 PRIM1P49642 420 aaKnown RBP16.87■□□□□ 0.29
KIF3A-201ENST00000378735 ABCC3O15438 1527 aa16.87■□□□□ 0.29
KIF3A-201ENST00000378735 EXOSC9Q06265 439 aaKnown RBP16.87■□□□□ 0.29
KIF3A-201ENST00000378735 NOB1Q9ULX3 412 aaKnown RBP16.87■□□□□ 0.29
KIF3A-201ENST00000378735 YEATS2Q9ULM3 1422 aa16.86■□□□□ 0.29
KIF3A-201ENST00000378735 NSD2O96028 1365 aa16.86■□□□□ 0.29
KIF3A-201ENST00000378735 AK9Q5TCS8 1911 aa16.86■□□□□ 0.29
KIF3A-201ENST00000378735 FAM69CQ0P6D2 419 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms