RNA–Protein interactions for RNA: ENST00000378126.4

PCDHA6-201, Transcript of protocadherin alpha 6, humanhuman

BASIC

Gene PCDHA6, Length 3,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-201ENST00000378126 PDZRN3Q9UPQ7 1066 aa17.72■□□□□ 0.43
PCDHA6-201ENST00000378126 ARHGEF28Q8N1W1 1705 aaKnown RBP17.72■□□□□ 0.43
PCDHA6-201ENST00000378126 DDRGK1Q96HY6 314 aa17.72■□□□□ 0.43
PCDHA6-201ENST00000378126 ABCC11Q96J66 1382 aa17.71■□□□□ 0.43
PCDHA6-201ENST00000378126 SPRYD3Q8NCJ5 442 aa17.71■□□□□ 0.43
PCDHA6-201ENST00000378126 NOB1Q9ULX3 412 aaKnown RBP17.71■□□□□ 0.43
PCDHA6-201ENST00000378126 ZKSCAN2Q63HK3 967 aa17.71■□□□□ 0.43
PCDHA6-201ENST00000378126 PHACTR3Q96KR7 559 aa17.71■□□□□ 0.43
PCDHA6-201ENST00000378126 DZIP1LQ8IYY4 767 aaKnown RBP17.71■□□□□ 0.42
PCDHA6-201ENST00000378126 NGEFQ8N5V2 710 aa17.71■□□□□ 0.42
PCDHA6-201ENST00000378126 PLEKHF1Q96S99 279 aa17.7■□□□□ 0.42
PCDHA6-201ENST00000378126 ATAD2Q6PL18 1390 aa17.7■□□□□ 0.42
PCDHA6-201ENST00000378126 ZC3H13Q5T200 1668 aaKnown RBP17.69■□□□□ 0.42
PCDHA6-201ENST00000378126 TRIM27P14373 513 aa17.69■□□□□ 0.42
PCDHA6-201ENST00000378126 PHF23Q9BUL5 403 aaPredicted RBP17.69■□□□□ 0.42
PCDHA6-201ENST00000378126 PTPRMP28827 1452 aa17.69■□□□□ 0.42
PCDHA6-201ENST00000378126 POLKQ9UBT6 870 aa17.69■□□□□ 0.42
PCDHA6-201ENST00000378126 CEBPAP49715 358 aaPredicted RBP17.68■□□□□ 0.42
PCDHA6-201ENST00000378126 DCTN1Q14203 1278 aa17.68■□□□□ 0.42
PCDHA6-201ENST00000378126 RICTORQ6R327 1708 aa17.68■□□□□ 0.42
PCDHA6-201ENST00000378126 SLKQ9H2G2 1235 aaPredicted RBP17.68■□□□□ 0.42
PCDHA6-201ENST00000378126 IQSEC2Q5JU85 1478 aa17.67■□□□□ 0.42
PCDHA6-201ENST00000378126 MVPQ14764 893 aaKnown RBP17.67■□□□□ 0.42
PCDHA6-201ENST00000378126 FAM83GA6ND36 823 aa17.67■□□□□ 0.42
PCDHA6-201ENST00000378126 C1orf115Q9H7X2 142 aa17.67■□□□□ 0.42
PCDHA6-201ENST00000378126 ARHGAP31Q2M1Z3 1444 aa17.66■□□□□ 0.42
PCDHA6-201ENST00000378126 TMEM57Q8N5G2 664 aa17.66■□□□□ 0.42
PCDHA6-201ENST00000378126 PLEKHG5O94827 1062 aa17.66■□□□□ 0.42
PCDHA6-201ENST00000378126 PMFBP1Q8TBY8 1022 aa17.65■□□□□ 0.42
PCDHA6-201ENST00000378126 SLC26A8Q96RN1 970 aa17.65■□□□□ 0.42
PCDHA6-201ENST00000378126 RIMS2Q9UQ26 1411 aa17.65■□□□□ 0.42
PCDHA6-201ENST00000378126 NSD2O96028 1365 aa17.65■□□□□ 0.42
PCDHA6-201ENST00000378126 METP08581 1390 aa17.65■□□□□ 0.42
PCDHA6-201ENST00000378126 CCDC27Q2M243 656 aa17.65■□□□□ 0.42
PCDHA6-201ENST00000378126 RWDD1Q9H446 243 aaPredicted RBP17.64■□□□□ 0.41
PCDHA6-201ENST00000378126 PREX1Q8TCU6 1659 aa17.64■□□□□ 0.41
PCDHA6-201ENST00000378126 CD163L1Q9NR16 1453 aa17.64■□□□□ 0.41
PCDHA6-201ENST00000378126 NUDT16Q96DE0 195 aaKnown RBP17.64■□□□□ 0.41
PCDHA6-201ENST00000378126 TMEM131LA2VDJ0 1609 aa17.63■□□□□ 0.41
PCDHA6-201ENST00000378126 NFKBIBQ15653 356 aa17.63■□□□□ 0.41
PCDHA6-201ENST00000378126 TSPYL6Q8N831 410 aa17.63■□□□□ 0.41
PCDHA6-201ENST00000378126 ALKQ9UM73 1620 aa17.63■□□□□ 0.41
PCDHA6-201ENST00000378126 WASLO00401 505 aaPredicted RBP17.62■□□□□ 0.41
PCDHA6-201ENST00000378126 PUS7Q96PZ0 661 aaKnown RBP17.62■□□□□ 0.41
PCDHA6-201ENST00000378126 ATF7IPQ6VMQ6 1270 aa17.62■□□□□ 0.41
PCDHA6-201ENST00000378126 RTN4Q9NQC3 1192 aaKnown RBP17.61■□□□□ 0.41
PCDHA6-201ENST00000378126 FRAT2O75474 233 aaPredicted RBP17.6■□□□□ 0.41
PCDHA6-201ENST00000378126 MFAP1P55081 439 aaKnown RBP17.6■□□□□ 0.41
PCDHA6-201ENST00000378126 COG3Q96JB2 828 aa17.6■□□□□ 0.41
PCDHA6-201ENST00000378126 RSPH6AQ9H0K4 717 aa17.6■□□□□ 0.41
PCDHA6-201ENST00000378126 AEBP1Q8IUX7 1158 aa17.59■□□□□ 0.41
PCDHA6-201ENST00000378126 PPIP5K1Q6PFW1 1433 aa17.59■□□□□ 0.41
PCDHA6-201ENST00000378126 LNPKQ9C0E8 428 aa17.59■□□□□ 0.41
PCDHA6-201ENST00000378126 ZFYVE9O95405 1425 aa17.58■□□□□ 0.41
PCDHA6-201ENST00000378126 USP19O94966 1318 aa17.58■□□□□ 0.4
PCDHA6-201ENST00000378126 A2ML1A8K2U0 1454 aa17.58■□□□□ 0.4
PCDHA6-201ENST00000378126 KRT24Q2M2I5 525 aa17.58■□□□□ 0.4
PCDHA6-201ENST00000378126 ARXQ96QS3 562 aa17.57■□□□□ 0.4
PCDHA6-201ENST00000378126 CLTCQ00610 1675 aaKnown RBP17.57■□□□□ 0.4
PCDHA6-201ENST00000378126 FCHSD2O94868 740 aa17.57■□□□□ 0.4
PCDHA6-201ENST00000378126 ARHGEF40Q8TER5 1519 aa17.57■□□□□ 0.4
PCDHA6-201ENST00000378126 ZMYM3Q14202 1370 aa17.57■□□□□ 0.4
PCDHA6-201ENST00000378126 ANO8Q9HCE9 1232 aaPredicted RBP17.57■□□□□ 0.4
PCDHA6-201ENST00000378126 NINLQ9Y2I6 1382 aa17.56■□□□□ 0.4
PCDHA6-201ENST00000378126 NUTM2GQ5VZR2 741 aa17.56■□□□□ 0.4
PCDHA6-201ENST00000378126 UPF2Q9HAU5 1272 aaKnown RBP17.55■□□□□ 0.4
PCDHA6-201ENST00000378126 NLRP1Q9C000 1473 aa17.55■□□□□ 0.4
PCDHA6-201ENST00000378126 DDX19BQ9UMR2 479 aa17.55■□□□□ 0.4
PCDHA6-201ENST00000378126 CCDC61Q9Y6R9 512 aa17.55■□□□□ 0.4
PCDHA6-201ENST00000378126 COL3A1P02461 1466 aaPredicted RBP17.54■□□□□ 0.4
PCDHA6-201ENST00000378126 NFE2L2Q16236 605 aa17.54■□□□□ 0.4
PCDHA6-201ENST00000378126 PRR36Q9H6K5 1346 aa17.54■□□□□ 0.4
PCDHA6-201ENST00000378126 RIMBP3CA6NJZ7 1639 aa17.54■□□□□ 0.4
PCDHA6-201ENST00000378126 RIMBP3BA6NNM3 1639 aa17.54■□□□□ 0.4
PCDHA6-201ENST00000378126 RIMBP3Q9UFD9 1639 aa17.54■□□□□ 0.4
PCDHA6-201ENST00000378126 APBB1O00213 710 aa17.54■□□□□ 0.4
PCDHA6-201ENST00000378126 SULT6B1Q6IMI4 303 aa17.54■□□□□ 0.4
PCDHA6-201ENST00000378126 MBIPQ9NS73 344 aa17.54■□□□□ 0.4
PCDHA6-201ENST00000378126 MIS18AQ9NYP9 233 aa17.54■□□□□ 0.4
PCDHA6-201ENST00000378126 RBM33Q96EV2 1170 aaKnown RBP17.53■□□□□ 0.4
PCDHA6-201ENST00000378126 C8orf58Q8NAV2 365 aa17.53■□□□□ 0.4
PCDHA6-201ENST00000378126 MCM10Q7L590 875 aa17.53■□□□□ 0.4
PCDHA6-201ENST00000378126 IL13P35225 146 aa17.52■□□□□ 0.4
PCDHA6-201ENST00000378126 PNNQ9H307 717 aaKnown RBP17.52■□□□□ 0.4
PCDHA6-201ENST00000378126 LTKP29376 864 aa17.52■□□□□ 0.4
PCDHA6-201ENST00000378126 USP32Q8NFA0 1604 aa17.51■□□□□ 0.39
PCDHA6-201ENST00000378126 IPO8O15397 1037 aaKnown RBP17.51■□□□□ 0.39
PCDHA6-201ENST00000378126 IL27Q8NEV9 243 aa17.51■□□□□ 0.39
PCDHA6-201ENST00000378126 LRRC7Q96NW7 1537 aa17.51■□□□□ 0.39
PCDHA6-201ENST00000378126 HSP90AB2PQ58FF8 381 aa17.51■□□□□ 0.39
PCDHA6-201ENST00000378126 DIP2BQ9P265 1576 aa17.51■□□□□ 0.39
PCDHA6-201ENST00000378126 ANKRD45Q5TZF3 282 aa17.5■□□□□ 0.39
PCDHA6-201ENST00000378126 TWISTNBQ3B726 338 aaPredicted RBP17.5■□□□□ 0.39
PCDHA6-201ENST00000378126 C14orf37Q86TY3 774 aa17.49■□□□□ 0.39
PCDHA6-201ENST00000378126 VAMP4O75379 141 aa17.49■□□□□ 0.39
PCDHA6-201ENST00000378126 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.49■□□□□ 0.39
PCDHA6-201ENST00000378126 KIF16BQ96L93 1317 aa17.49■□□□□ 0.39
PCDHA6-201ENST00000378126 ZBTB40Q9NUA8 1239 aa17.48■□□□□ 0.39
PCDHA6-201ENST00000378126 ACEP12821 1306 aa17.48■□□□□ 0.39
PCDHA6-201ENST00000378126 ZBTB7CA1YPR0 619 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms