RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 PPIP5K1Q6PFW1 1433 aa24.93■■□□□ 1.58
PCDHA4-201ENST00000378125 ANP32AP39687 249 aaKnown RBP24.93■■□□□ 1.58
PCDHA4-201ENST00000378125 HDGFP51858 240 aaKnown RBP24.93■■□□□ 1.58
PCDHA4-201ENST00000378125 MAPK8IP3Q9UPT6 1336 aa24.93■■□□□ 1.58
PCDHA4-201ENST00000378125 CENPQQ7L2Z9 268 aaPredicted RBP24.92■■□□□ 1.58
PCDHA4-201ENST00000378125 TNNQ9UQP3 1299 aa24.92■■□□□ 1.58
PCDHA4-201ENST00000378125 NME9Q86XW9 330 aa24.92■■□□□ 1.58
PCDHA4-201ENST00000378125 NUDT16Q96DE0 195 aaKnown RBP24.92■■□□□ 1.58
PCDHA4-201ENST00000378125 KIF20BQ96Q89 1820 aa24.92■■□□□ 1.58
PCDHA4-201ENST00000378125 MED14O60244 1454 aa24.92■■□□□ 1.58
PCDHA4-201ENST00000378125 TMPOP42166 694 aaKnown RBP24.91■■□□□ 1.58
PCDHA4-201ENST00000378125 TMEM2Q9UHN6 1383 aa24.91■■□□□ 1.58
PCDHA4-201ENST00000378125 NUTM2FA1L443 756 aa24.9■■□□□ 1.58
PCDHA4-201ENST00000378125 BACH2Q9BYV9 841 aa24.9■■□□□ 1.58
PCDHA4-201ENST00000378125 POLKQ9UBT6 870 aa24.9■■□□□ 1.58
PCDHA4-201ENST00000378125 MS4A1P11836 297 aa24.89■■□□□ 1.58
PCDHA4-201ENST00000378125 LTKP29376 864 aa24.89■■□□□ 1.58
PCDHA4-201ENST00000378125 MYH16Q9H6N6 1097 aa24.89■■□□□ 1.58
PCDHA4-201ENST00000378125 TRIM35Q9UPQ4 493 aa24.89■■□□□ 1.57
PCDHA4-201ENST00000378125 ATP7BP35670 1465 aa24.88■■□□□ 1.57
PCDHA4-201ENST00000378125 PAK3O75914 559 aaPredicted RBP24.88■■□□□ 1.57
PCDHA4-201ENST00000378125 ADGRB2O60241 1585 aa24.88■■□□□ 1.57
PCDHA4-201ENST00000378125 CLUAP1Q96AJ1 413 aa24.87■■□□□ 1.57
PCDHA4-201ENST00000378125 EMILIN1Q9Y6C2 1016 aa24.87■■□□□ 1.57
PCDHA4-201ENST00000378125 RIPK4P57078 832 aa24.87■■□□□ 1.57
PCDHA4-201ENST00000378125 UBR1Q8IWV7 1749 aa24.87■■□□□ 1.57
PCDHA4-201ENST00000378125 PDE3AQ14432 1141 aa24.86■■□□□ 1.57
PCDHA4-201ENST00000378125 SLC26A8Q96RN1 970 aa24.86■■□□□ 1.57
PCDHA4-201ENST00000378125 RGS3P49796 1198 aa24.86■■□□□ 1.57
PCDHA4-201ENST00000378125 ROBO2Q9HCK4 1378 aa24.85■■□□□ 1.57
PCDHA4-201ENST00000378125 IGHDP01880 384 aa24.85■■□□□ 1.57
PCDHA4-201ENST00000378125 HMOX1P09601 288 aa24.85■■□□□ 1.57
PCDHA4-201ENST00000378125 NOP58Q9Y2X3 529 aaKnown RBP24.85■■□□□ 1.57
PCDHA4-201ENST00000378125 RLBP1P12271 317 aa24.84■■□□□ 1.57
PCDHA4-201ENST00000378125 CCDC61Q9Y6R9 512 aa24.84■■□□□ 1.57
PCDHA4-201ENST00000378125 PNPLA6Q8IY17 1366 aa24.84■■□□□ 1.57
PCDHA4-201ENST00000378125 IPO9Q96P70 1041 aaKnown RBP24.84■■□□□ 1.57
PCDHA4-201ENST00000378125 EXOSC9Q06265 439 aaKnown RBP24.83■■□□□ 1.57
PCDHA4-201ENST00000378125 PRR36Q9H6K5 1346 aa24.83■■□□□ 1.57
PCDHA4-201ENST00000378125 CPSF1Q10570 1443 aaKnown RBP24.83■■□□□ 1.57
PCDHA4-201ENST00000378125 PRKAR2BP31323 418 aa24.82■■□□□ 1.56
PCDHA4-201ENST00000378125 RRS1Q15050 365 aaKnown RBP24.81■■□□□ 1.56
PCDHA4-201ENST00000378125 EDC4Q6P2E9 1401 aaKnown RBP24.81■■□□□ 1.56
PCDHA4-201ENST00000378125 ADAMTS13Q76LX8 1427 aa24.81■■□□□ 1.56
PCDHA4-201ENST00000378125 MAP2P11137 1827 aaKnown RBP24.8■■□□□ 1.56
PCDHA4-201ENST00000378125 FAM135BQ49AJ0 1406 aa24.8■■□□□ 1.56
PCDHA4-201ENST00000378125 CPS1P31327 1500 aa24.79■■□□□ 1.56
PCDHA4-201ENST00000378125 COG3Q96JB2 828 aa24.79■■□□□ 1.56
PCDHA4-201ENST00000378125 TECPR2O15040 1411 aa24.78■■□□□ 1.56
PCDHA4-201ENST00000378125 NCBP3Q53F19 620 aaKnown RBP24.78■■□□□ 1.56
PCDHA4-201ENST00000378125 PHACTR3Q96KR7 559 aa24.78■■□□□ 1.56
PCDHA4-201ENST00000378125 RSPH6AQ9H0K4 717 aa24.78■■□□□ 1.56
PCDHA4-201ENST00000378125 FCHSD2O94868 740 aa24.77■■□□□ 1.56
PCDHA4-201ENST00000378125 SIRT1Q96EB6 747 aa24.77■■□□□ 1.56
PCDHA4-201ENST00000378125 LAS1LQ9Y4W2 734 aaKnown RBP24.77■■□□□ 1.56
PCDHA4-201ENST00000378125 KNDC1Q76NI1 1749 aa24.77■■□□□ 1.56
PCDHA4-201ENST00000378125 LRRC7Q96NW7 1537 aa24.76■■□□□ 1.55
PCDHA4-201ENST00000378125 ZBTB47Q9UFB7 747 aaPredicted RBP24.76■■□□□ 1.55
PCDHA4-201ENST00000378125 PNNQ9H307 717 aaKnown RBP24.75■■□□□ 1.55
PCDHA4-201ENST00000378125 SMC4Q9NTJ3 1288 aa24.75■■□□□ 1.55
PCDHA4-201ENST00000378125 CDC42BPGQ6DT37 1551 aa24.75■■□□□ 1.55
PCDHA4-201ENST00000378125 TRHP20396 242 aaPredicted RBP24.75■■□□□ 1.55
PCDHA4-201ENST00000378125 EID1Q9Y6B2 187 aa24.74■■□□□ 1.55
PCDHA4-201ENST00000378125 THUMPD2Q9BTF0 503 aaKnown RBP24.74■■□□□ 1.55
PCDHA4-201ENST00000378125 PLEKHG1Q9ULL1 1385 aa24.73■■□□□ 1.55
PCDHA4-201ENST00000378125 NEFMP07197 916 aa24.73■■□□□ 1.55
PCDHA4-201ENST00000378125 IL13P35225 146 aa24.72■■□□□ 1.55
PCDHA4-201ENST00000378125 SSH1Q8WYL5 1049 aa24.72■■□□□ 1.55
PCDHA4-201ENST00000378125 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.72■■□□□ 1.55
PCDHA4-201ENST00000378125 PCDHB15Q9Y5E8 787 aa24.72■■□□□ 1.55
PCDHA4-201ENST00000378125 PTPRUQ92729 1446 aa24.71■■□□□ 1.55
PCDHA4-201ENST00000378125 ACEP12821 1306 aa24.71■■□□□ 1.55
PCDHA4-201ENST00000378125 SOX12O15370 315 aa24.7■■□□□ 1.55
PCDHA4-201ENST00000378125 ZKSCAN2Q63HK3 967 aa24.7■■□□□ 1.55
PCDHA4-201ENST00000378125 FTSJ3Q8IY81 847 aaKnown RBP24.7■■□□□ 1.55
PCDHA4-201ENST00000378125 AMOTL2Q9Y2J4 779 aa24.7■■□□□ 1.54
PCDHA4-201ENST00000378125 ZNF692Q9BU19 519 aaPredicted RBP24.69■■□□□ 1.54
PCDHA4-201ENST00000378125 C3P01024 1663 aa24.69■■□□□ 1.54
PCDHA4-201ENST00000378125 MON2Q7Z3U7 1717 aa24.68■■□□□ 1.54
PCDHA4-201ENST00000378125 C8orf34Q49A92 452 aa24.68■■□□□ 1.54
PCDHA4-201ENST00000378125 DZIP1LQ8IYY4 767 aaKnown RBP24.68■■□□□ 1.54
PCDHA4-201ENST00000378125 ITSN1Q15811 1721 aa24.68■■□□□ 1.54
PCDHA4-201ENST00000378125 PMFBP1Q8TBY8 1022 aa24.67■■□□□ 1.54
PCDHA4-201ENST00000378125 IL16Q14005 1332 aa24.67■■□□□ 1.54
PCDHA4-201ENST00000378125 FAM161AQ3B820 660 aa24.67■■□□□ 1.54
PCDHA4-201ENST00000378125 NFE2L2Q16236 605 aa24.66■■□□□ 1.54
PCDHA4-201ENST00000378125 NOB1Q9ULX3 412 aaKnown RBP24.66■■□□□ 1.54
PCDHA4-201ENST00000378125 TTC21BQ7Z4L5 1316 aa24.66■■□□□ 1.54
PCDHA4-201ENST00000378125 TRIM27P14373 513 aa24.66■■□□□ 1.54
PCDHA4-201ENST00000378125 NBR1Q14596 966 aa24.66■■□□□ 1.54
PCDHA4-201ENST00000378125 MVPQ14764 893 aaKnown RBP24.66■■□□□ 1.54
PCDHA4-201ENST00000378125 AKAP12Q02952 1782 aa24.65■■□□□ 1.54
PCDHA4-201ENST00000378125 AATKQ6ZMQ8 1374 aa24.65■■□□□ 1.54
PCDHA4-201ENST00000378125 CT47B1P0C2W7 299 aaPredicted RBP24.64■■□□□ 1.54
PCDHA4-201ENST00000378125 CDK12Q9NYV4 1490 aaPredicted RBP24.64■■□□□ 1.54
PCDHA4-201ENST00000378125 ITPRIPQ8IWB1 547 aa24.62■■□□□ 1.53
PCDHA4-201ENST00000378125 FER1L4A9Z1Z3 1794 aa24.62■■□□□ 1.53
PCDHA4-201ENST00000378125 ELL2O00472 640 aaPredicted RBP24.62■■□□□ 1.53
PCDHA4-201ENST00000378125 FAM83GA6ND36 823 aa24.61■■□□□ 1.53
PCDHA4-201ENST00000378125 ATF7IPQ6VMQ6 1270 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms