RNA–Protein interactions for RNA: ENST00000378123.4

PCDHA8-201, Transcript of protocadherin alpha 8, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA8, Length 2,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8-201ENST00000378123 RIPK4P57078 832 aa22.91■■□□□ 1.26
PCDHA8-201ENST00000378123 FTSJ3Q8IY81 847 aaKnown RBP22.91■■□□□ 1.26
PCDHA8-201ENST00000378123 PMFBP1Q8TBY8 1022 aa22.9■■□□□ 1.26
PCDHA8-201ENST00000378123 SSH1Q8WYL5 1049 aa22.9■■□□□ 1.26
PCDHA8-201ENST00000378123 ZKSCAN2Q63HK3 967 aa22.89■■□□□ 1.26
PCDHA8-201ENST00000378123 USP35Q9P2H5 1018 aa22.89■■□□□ 1.26
PCDHA8-201ENST00000378123 PREX1Q8TCU6 1659 aa22.89■■□□□ 1.25
PCDHA8-201ENST00000378123 MVPQ14764 893 aaKnown RBP22.89■■□□□ 1.25
PCDHA8-201ENST00000378123 ATAD2Q6PL18 1390 aa22.88■■□□□ 1.25
PCDHA8-201ENST00000378123 HDGFL2Q7Z4V5 671 aaPredicted RBP22.88■■□□□ 1.25
PCDHA8-201ENST00000378123 DZIP1LQ8IYY4 767 aaKnown RBP22.88■■□□□ 1.25
PCDHA8-201ENST00000378123 DIAPH1O60610 1272 aaKnown RBP22.88■■□□□ 1.25
PCDHA8-201ENST00000378123 TRIM27P14373 513 aa22.87■■□□□ 1.25
PCDHA8-201ENST00000378123 COL3A1P02461 1466 aaPredicted RBP22.86■■□□□ 1.25
PCDHA8-201ENST00000378123 NLRP1Q9C000 1473 aa22.85■■□□□ 1.25
PCDHA8-201ENST00000378123 ADGRB2O60241 1585 aa22.85■■□□□ 1.25
PCDHA8-201ENST00000378123 ITPRIPQ8IWB1 547 aa22.85■■□□□ 1.25
PCDHA8-201ENST00000378123 RWDD1Q9H446 243 aaPredicted RBP22.84■■□□□ 1.25
PCDHA8-201ENST00000378123 NOB1Q9ULX3 412 aaKnown RBP22.84■■□□□ 1.25
PCDHA8-201ENST00000378123 ALKQ9UM73 1620 aa22.84■■□□□ 1.25
PCDHA8-201ENST00000378123 HMOX1P09601 288 aa22.83■■□□□ 1.25
PCDHA8-201ENST00000378123 FRAT2O75474 233 aaPredicted RBP22.82■■□□□ 1.24
PCDHA8-201ENST00000378123 THUMPD2Q9BTF0 503 aaKnown RBP22.82■■□□□ 1.24
PCDHA8-201ENST00000378123 NCKAP5LQ9HCH0 1330 aa22.82■■□□□ 1.24
PCDHA8-201ENST00000378123 ZRANB1Q9UGI0 708 aa22.82■■□□□ 1.24
PCDHA8-201ENST00000378123 PRKAR2BP31323 418 aa22.81■■□□□ 1.24
PCDHA8-201ENST00000378123 POLKQ9UBT6 870 aa22.8■■□□□ 1.24
PCDHA8-201ENST00000378123 ARHGEF40Q8TER5 1519 aa22.8■■□□□ 1.24
PCDHA8-201ENST00000378123 PHACTR3Q96KR7 559 aa22.79■■□□□ 1.24
PCDHA8-201ENST00000378123 TMEM57Q8N5G2 664 aa22.79■■□□□ 1.24
PCDHA8-201ENST00000378123 EMILIN1Q9Y6C2 1016 aa22.79■■□□□ 1.24
PCDHA8-201ENST00000378123 ATF7IPQ6VMQ6 1270 aa22.78■■□□□ 1.24
PCDHA8-201ENST00000378123 NCBP3Q53F19 620 aaKnown RBP22.77■■□□□ 1.24
PCDHA8-201ENST00000378123 SLKQ9H2G2 1235 aaPredicted RBP22.77■■□□□ 1.24
PCDHA8-201ENST00000378123 TSPOAP1O95153 1857 aa22.77■■□□□ 1.24
PCDHA8-201ENST00000378123 TXNDC2Q86VQ3 553 aa22.77■■□□□ 1.23
PCDHA8-201ENST00000378123 AAMPQ13685 434 aa22.76■■□□□ 1.23
PCDHA8-201ENST00000378123 NME9Q86XW9 330 aa22.76■■□□□ 1.23
PCDHA8-201ENST00000378123 IL27Q8NEV9 243 aa22.76■■□□□ 1.23
PCDHA8-201ENST00000378123 PNPLA6Q8IY17 1366 aa22.75■■□□□ 1.23
PCDHA8-201ENST00000378123 ELL2O00472 640 aaPredicted RBP22.75■■□□□ 1.23
PCDHA8-201ENST00000378123 RSPH6AQ9H0K4 717 aa22.75■■□□□ 1.23
PCDHA8-201ENST00000378123 CT47B1P0C2W7 299 aaPredicted RBP22.74■■□□□ 1.23
PCDHA8-201ENST00000378123 GSE1Q14687 1217 aa22.73■■□□□ 1.23
PCDHA8-201ENST00000378123 FCHSD2O94868 740 aa22.73■■□□□ 1.23
PCDHA8-201ENST00000378123 VIRMAQ69YN4 1812 aaKnown RBP22.73■■□□□ 1.23
PCDHA8-201ENST00000378123 DDX19BQ9UMR2 479 aa22.72■■□□□ 1.23
PCDHA8-201ENST00000378123 RIMS2Q9UQ26 1411 aa22.72■■□□□ 1.23
PCDHA8-201ENST00000378123 A2ML1A8K2U0 1454 aa22.72■■□□□ 1.23
PCDHA8-201ENST00000378123 MED14O60244 1454 aa22.71■■□□□ 1.23
PCDHA8-201ENST00000378123 CLTCQ00610 1675 aaKnown RBP22.71■■□□□ 1.23
PCDHA8-201ENST00000378123 RRS1Q15050 365 aaKnown RBP22.71■■□□□ 1.23
PCDHA8-201ENST00000378123 SPRYD3Q8NCJ5 442 aa22.71■■□□□ 1.23
PCDHA8-201ENST00000378123 IL16Q14005 1332 aa22.71■■□□□ 1.23
PCDHA8-201ENST00000378123 LRRC7Q96NW7 1537 aa22.7■■□□□ 1.23
PCDHA8-201ENST00000378123 TSPYL6Q8N831 410 aa22.7■■□□□ 1.22
PCDHA8-201ENST00000378123 RTN4Q9NQC3 1192 aaKnown RBP22.7■■□□□ 1.22
PCDHA8-201ENST00000378123 METP08581 1390 aa22.7■■□□□ 1.22
PCDHA8-201ENST00000378123 ANKRD26Q9UPS8 1709 aa22.69■■□□□ 1.22
PCDHA8-201ENST00000378123 TBC1D32Q96NH3 1257 aa22.69■■□□□ 1.22
PCDHA8-201ENST00000378123 UPF2Q9HAU5 1272 aaKnown RBP22.69■■□□□ 1.22
PCDHA8-201ENST00000378123 ZBTB40Q9NUA8 1239 aa22.68■■□□□ 1.22
PCDHA8-201ENST00000378123 WASLO00401 505 aaPredicted RBP22.68■■□□□ 1.22
PCDHA8-201ENST00000378123 MFAP1P55081 439 aaKnown RBP22.68■■□□□ 1.22
PCDHA8-201ENST00000378123 PNNQ9H307 717 aaKnown RBP22.67■■□□□ 1.22
PCDHA8-201ENST00000378123 C1orf115Q9H7X2 142 aa22.67■■□□□ 1.22
PCDHA8-201ENST00000378123 NUTM2FA1L443 756 aa22.66■■□□□ 1.22
PCDHA8-201ENST00000378123 HDAC1Q13547 482 aaPredicted RBP22.66■■□□□ 1.22
PCDHA8-201ENST00000378123 PPIP5K1Q6PFW1 1433 aa22.66■■□□□ 1.22
PCDHA8-201ENST00000378123 FAM83GA6ND36 823 aa22.66■■□□□ 1.22
PCDHA8-201ENST00000378123 BECN1Q14457 450 aa22.66■■□□□ 1.22
PCDHA8-201ENST00000378123 FAM135BQ49AJ0 1406 aa22.65■■□□□ 1.22
PCDHA8-201ENST00000378123 KIF20BQ96Q89 1820 aa22.65■■□□□ 1.22
PCDHA8-201ENST00000378123 NFE2L2Q16236 605 aa22.65■■□□□ 1.22
PCDHA8-201ENST00000378123 NUDT16Q96DE0 195 aaKnown RBP22.65■■□□□ 1.22
PCDHA8-201ENST00000378123 TBC1D2Q9BYX2 928 aa22.65■■□□□ 1.22
PCDHA8-201ENST00000378123 IL13P35225 146 aa22.64■■□□□ 1.22
PCDHA8-201ENST00000378123 DCTN1Q14203 1278 aa22.64■■□□□ 1.22
PCDHA8-201ENST00000378123 KIF16BQ96L93 1317 aa22.64■■□□□ 1.21
PCDHA8-201ENST00000378123 IPO8O15397 1037 aaKnown RBP22.64■■□□□ 1.21
PCDHA8-201ENST00000378123 LNPKQ9C0E8 428 aa22.64■■□□□ 1.21
PCDHA8-201ENST00000378123 BRPF3Q9ULD4 1205 aa22.63■■□□□ 1.21
PCDHA8-201ENST00000378123 VAMP4O75379 141 aa22.62■■□□□ 1.21
PCDHA8-201ENST00000378123 MAP2P11137 1827 aaKnown RBP22.62■■□□□ 1.21
PCDHA8-201ENST00000378123 SMC5Q8IY18 1101 aa22.62■■□□□ 1.21
PCDHA8-201ENST00000378123 MBIPQ9NS73 344 aa22.61■■□□□ 1.21
PCDHA8-201ENST00000378123 DIP2BQ9P265 1576 aa22.61■■□□□ 1.21
PCDHA8-201ENST00000378123 ATP7BP35670 1465 aa22.6■■□□□ 1.21
PCDHA8-201ENST00000378123 ALDH1L2Q3SY69 923 aa22.6■■□□□ 1.21
PCDHA8-201ENST00000378123 COG3Q96JB2 828 aa22.6■■□□□ 1.21
PCDHA8-201ENST00000378123 ESF1Q9H501 851 aaKnown RBP22.6■■□□□ 1.21
PCDHA8-201ENST00000378123 C22orf23Q9BZE7 217 aa22.59■■□□□ 1.21
PCDHA8-201ENST00000378123 CPSF1Q10570 1443 aaKnown RBP22.59■■□□□ 1.21
PCDHA8-201ENST00000378123 MRPL50Q8N5N7 158 aaKnown RBP22.58■■□□□ 1.21
PCDHA8-201ENST00000378123 C8orf58Q8NAV2 365 aa22.58■■□□□ 1.21
PCDHA8-201ENST00000378123 CPS1P31327 1500 aa22.58■■□□□ 1.2
PCDHA8-201ENST00000378123 RIMBP3CA6NJZ7 1639 aa22.58■■□□□ 1.2
PCDHA8-201ENST00000378123 RIMBP3BA6NNM3 1639 aa22.58■■□□□ 1.2
PCDHA8-201ENST00000378123 RIMBP3Q9UFD9 1639 aa22.58■■□□□ 1.2
PCDHA8-201ENST00000378123 ANTXR1Q9H6X2 564 aa22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms