RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 ATF7IPQ6VMQ6 1270 aa18.01■□□□□ 0.47
TCOF1-202ENST00000377797 USP35Q9P2H5 1018 aa18.01■□□□□ 0.47
TCOF1-202ENST00000377797 ZNF530Q6P9A1 599 aaPredicted RBP18■□□□□ 0.47
TCOF1-202ENST00000377797 ZC3H6P61129 1189 aaKnown RBP18■□□□□ 0.47
TCOF1-202ENST00000377797 SYTL4Q96C24 671 aaPredicted RBP18■□□□□ 0.47
TCOF1-202ENST00000377797 PREX2Q70Z35 1606 aa18■□□□□ 0.47
TCOF1-202ENST00000377797 CCDC30Q5VVM6 783 aa18■□□□□ 0.47
TCOF1-202ENST00000377797 NPATQ14207 1427 aa17.99■□□□□ 0.47
TCOF1-202ENST00000377797 PUS7Q96PZ0 661 aaKnown RBP17.99■□□□□ 0.47
TCOF1-202ENST00000377797 ABCC1P33527 1531 aa17.99■□□□□ 0.47
TCOF1-202ENST00000377797 YEATS2Q9ULM3 1422 aa17.99■□□□□ 0.47
TCOF1-202ENST00000377797 DUSP27Q5VZP5 1158 aa17.99■□□□□ 0.47
TCOF1-202ENST00000377797 RILPL2Q969X0 211 aa17.99■□□□□ 0.47
TCOF1-202ENST00000377797 COL17A1Q9UMD9 1497 aaPredicted RBP17.99■□□□□ 0.47
TCOF1-202ENST00000377797 SLC4A2P04920 1241 aa17.99■□□□□ 0.47
TCOF1-202ENST00000377797 TAOK2Q9UL54 1235 aa17.99■□□□□ 0.47
TCOF1-202ENST00000377797 DCTN1Q14203 1278 aa17.98■□□□□ 0.47
TCOF1-202ENST00000377797 AIMP1Q12904 312 aaKnown RBP17.98■□□□□ 0.47
TCOF1-202ENST00000377797 SLC4A3P48751 1232 aa17.97■□□□□ 0.47
TCOF1-202ENST00000377797 KCNH5Q8NCM2 988 aa17.97■□□□□ 0.47
TCOF1-202ENST00000377797 TATP17735 454 aaPredicted RBP17.97■□□□□ 0.47
TCOF1-202ENST00000377797 C20orf194Q5TEA3 1177 aa17.96■□□□□ 0.47
TCOF1-202ENST00000377797 GLIPR1L2Q4G1C9 344 aa17.96■□□□□ 0.47
TCOF1-202ENST00000377797 HDGFL1Q5TGJ6 251 aa17.96■□□□□ 0.47
TCOF1-202ENST00000377797 MCM10Q7L590 875 aa17.96■□□□□ 0.46
TCOF1-202ENST00000377797 STRN4Q9NRL3 753 aa17.96■□□□□ 0.46
TCOF1-202ENST00000377797 SPATA31E1Q6ZUB1 1445 aa17.95■□□□□ 0.46
TCOF1-202ENST00000377797 C1orf115Q9H7X2 142 aa17.95■□□□□ 0.46
TCOF1-202ENST00000377797 MVPQ14764 893 aaKnown RBP17.95■□□□□ 0.46
TCOF1-202ENST00000377797 RARSP54136 660 aaKnown RBP17.95■□□□□ 0.46
TCOF1-202ENST00000377797 PRDM11Q9NQV5 511 aa17.95■□□□□ 0.46
TCOF1-202ENST00000377797 YTHDC2Q9H6S0 1430 aaKnown RBP17.95■□□□□ 0.46
TCOF1-202ENST00000377797 FANCIQ9NVI1 1328 aa17.95■□□□□ 0.46
TCOF1-202ENST00000377797 ZNF428Q96B54 188 aa17.94■□□□□ 0.46
TCOF1-202ENST00000377797 ABCC11Q96J66 1382 aa17.94■□□□□ 0.46
TCOF1-202ENST00000377797 UBTFL1P0CB47 393 aaPredicted RBP17.94■□□□□ 0.46
TCOF1-202ENST00000377797 RIC3Q7Z5B4 369 aa17.94■□□□□ 0.46
TCOF1-202ENST00000377797 PDZRN3Q9UPQ7 1066 aa17.94■□□□□ 0.46
TCOF1-202ENST00000377797 SSH1Q8WYL5 1049 aa17.93■□□□□ 0.46
TCOF1-202ENST00000377797 CDC42BPAQ5VT25 1732 aa17.93■□□□□ 0.46
TCOF1-202ENST00000377797 GTF2E1P29083 439 aaPredicted RBP17.93■□□□□ 0.46
TCOF1-202ENST00000377797 MIS18AQ9NYP9 233 aa17.92■□□□□ 0.46
TCOF1-202ENST00000377797 NKTRP30414 1462 aaKnown RBP17.92■□□□□ 0.46
TCOF1-202ENST00000377797 GNAI3P08754 354 aa17.92■□□□□ 0.46
TCOF1-202ENST00000377797 PPIP5K1Q6PFW1 1433 aa17.92■□□□□ 0.46
TCOF1-202ENST00000377797 TTC21BQ7Z4L5 1316 aa17.92■□□□□ 0.46
TCOF1-202ENST00000377797 TOM1L2Q6ZVM7 507 aa17.92■□□□□ 0.46
TCOF1-202ENST00000377797 ZRANB1Q9UGI0 708 aa17.91■□□□□ 0.46
TCOF1-202ENST00000377797 MLH3Q9UHC1 1453 aa17.91■□□□□ 0.46
TCOF1-202ENST00000377797 FOXD4L1Q9NU39 408 aa17.91■□□□□ 0.46
TCOF1-202ENST00000377797 GNAT3A8MTJ3 354 aa17.9■□□□□ 0.46
TCOF1-202ENST00000377797 USHBP1Q8N6Y0 703 aa17.9■□□□□ 0.46
TCOF1-202ENST00000377797 NCKAP5LQ9HCH0 1330 aa17.9■□□□□ 0.46
TCOF1-202ENST00000377797 A0A1W2PP64 1363 aa17.9■□□□□ 0.46
TCOF1-202ENST00000377797 NOL8Q76FK4 1167 aaKnown RBP17.89■□□□□ 0.45
TCOF1-202ENST00000377797 IFT57Q9NWB7 429 aa17.89■□□□□ 0.45
TCOF1-202ENST00000377797 POLR3AO14802 1390 aaPredicted RBP17.89■□□□□ 0.45
TCOF1-202ENST00000377797 HSP90AB2PQ58FF8 381 aa17.89■□□□□ 0.45
TCOF1-202ENST00000377797 POLKQ9UBT6 870 aa17.88■□□□□ 0.45
TCOF1-202ENST00000377797 ADCY10Q96PN6 1610 aa17.88■□□□□ 0.45
TCOF1-202ENST00000377797 TMEM57Q8N5G2 664 aa17.88■□□□□ 0.45
TCOF1-202ENST00000377797 TRIM44Q96DX7 344 aaPredicted RBP17.88■□□□□ 0.45
TCOF1-202ENST00000377797 G3BP1Q13283 466 aaKnown RBP eCLIP17.88■□□□□ 0.452e-7■■■■□ 22.1
TCOF1-202ENST00000377797 TBX22Q9Y458 520 aa17.88■□□□□ 0.45
TCOF1-202ENST00000377797 ST18O60284 1047 aa17.88■□□□□ 0.45
TCOF1-202ENST00000377797 ZFYVE16Q7Z3T8 1539 aa17.87■□□□□ 0.45
TCOF1-202ENST00000377797 LRPPRCP42704 1394 aaKnown RBP17.87■□□□□ 0.45
TCOF1-202ENST00000377797 IFIT2P09913 472 aaKnown RBP17.87■□□□□ 0.45
TCOF1-202ENST00000377797 GBP4Q96PP9 640 aa17.87■□□□□ 0.45
TCOF1-202ENST00000377797 SPG7Q9UQ90 795 aa17.87■□□□□ 0.45
TCOF1-202ENST00000377797 KCNA6P17658 529 aa17.87■□□□□ 0.45
TCOF1-202ENST00000377797 CFAP74Q9C0B2 1584 aa17.86■□□□□ 0.45
TCOF1-202ENST00000377797 DDX54Q8TDD1 881 aaKnown RBP17.86■□□□□ 0.45
TCOF1-202ENST00000377797 HSP90AB4PQ58FF6 505 aa17.86■□□□□ 0.45
TCOF1-202ENST00000377797 PLA2R1Q13018 1463 aa17.86■□□□□ 0.45
TCOF1-202ENST00000377797 PIK3C2GO75747 1445 aa17.86■□□□□ 0.45
TCOF1-202ENST00000377797 REC8O95072 547 aa17.86■□□□□ 0.45
TCOF1-202ENST00000377797 KRT28Q7Z3Y7 464 aa17.86■□□□□ 0.45
TCOF1-202ENST00000377797 SURF6O75683 361 aaKnown RBP17.85■□□□□ 0.45
TCOF1-202ENST00000377797 GNAI2P04899 355 aa17.85■□□□□ 0.45
TCOF1-202ENST00000377797 CCT4P50991 539 aaKnown RBP17.85■□□□□ 0.45
TCOF1-202ENST00000377797 DIAPH3Q9NSV4 1193 aa17.85■□□□□ 0.45
TCOF1-202ENST00000377797 BTBD11A6QL63 1104 aa17.84■□□□□ 0.45
TCOF1-202ENST00000377797 ZRSR1Q15695 479 aaKnown RBP17.84■□□□□ 0.45
TCOF1-202ENST00000377797 GCC1Q96CN9 775 aa17.84■□□□□ 0.45
TCOF1-202ENST00000377797 TTC21AQ8NDW8 1320 aa17.84■□□□□ 0.45
TCOF1-202ENST00000377797 FAM83GA6ND36 823 aa17.84■□□□□ 0.45
TCOF1-202ENST00000377797 GOLGA6L4A6NEF3 574 aa17.84■□□□□ 0.45
TCOF1-202ENST00000377797 KDM5DQ9BY66 1539 aa17.84■□□□□ 0.45
TCOF1-202ENST00000377797 CABP4P57796 275 aa17.84■□□□□ 0.45
TCOF1-202ENST00000377797 ALDH1L2Q3SY69 923 aa17.83■□□□□ 0.45
TCOF1-202ENST00000377797 UGGT1Q9NYU2 1555 aa17.83■□□□□ 0.44
TCOF1-202ENST00000377797 NPC1L1Q9UHC9 1359 aa17.83■□□□□ 0.44
TCOF1-202ENST00000377797 C22orf23Q9BZE7 217 aa17.82■□□□□ 0.44
TCOF1-202ENST00000377797 SRCIN1Q9C0H9 1055 aa17.82■□□□□ 0.44
TCOF1-202ENST00000377797 BACH2Q9BYV9 841 aa17.81■□□□□ 0.44
TCOF1-202ENST00000377797 CADPS2Q86UW7 1296 aa17.81■□□□□ 0.44
TCOF1-202ENST00000377797 GZF1Q9H116 711 aaPredicted RBP17.81■□□□□ 0.44
TCOF1-202ENST00000377797 TAF7Q15545 349 aaPredicted RBP17.81■□□□□ 0.44
TCOF1-202ENST00000377797 ANO2Q9NQ90 1003 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms