RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 GTPBP4Q9BZE4 634 aaKnown RBP10.88□□□□□ -0.67
CRNKL1-201ENST00000377327 RBM27Q9P2N5 1060 aaKnown RBP10.88□□□□□ -0.67
CRNKL1-201ENST00000377327 C9orf84Q5VXU9 1444 aa10.88□□□□□ -0.67
CRNKL1-201ENST00000377327 CCDC73Q6ZRK6 1079 aa10.87□□□□□ -0.67
CRNKL1-201ENST00000377327 BBXQ8WY36 941 aaPredicted RBP10.87□□□□□ -0.67
CRNKL1-201ENST00000377327 GPRASP1Q5JY77 1395 aa10.87□□□□□ -0.67
CRNKL1-201ENST00000377327 BIVM-ERCC5R4GMW8 1640 aa10.87□□□□□ -0.67
CRNKL1-201ENST00000377327 TRIM27P14373 513 aa10.87□□□□□ -0.67
CRNKL1-201ENST00000377327 SETQ01105 290 aaPredicted RBP10.87□□□□□ -0.67
CRNKL1-201ENST00000377327 HDAC1Q13547 482 aaPredicted RBP10.87□□□□□ -0.67
CRNKL1-201ENST00000377327 TBC1D9Q6ZT07 1266 aa10.87□□□□□ -0.67
CRNKL1-201ENST00000377327 CCDC34Q96HJ3 373 aa10.87□□□□□ -0.67
CRNKL1-201ENST00000377327 NOL7Q9UMY1 257 aaKnown RBP10.87□□□□□ -0.67
CRNKL1-201ENST00000377327 ERICH4A6NGS2 130 aa10.86□□□□□ -0.67
CRNKL1-201ENST00000377327 PDCP20941 246 aa10.86□□□□□ -0.67
CRNKL1-201ENST00000377327 TWISTNBQ3B726 338 aaPredicted RBP10.86□□□□□ -0.67
CRNKL1-201ENST00000377327 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.86□□□□□ -0.67
CRNKL1-201ENST00000377327 HMOX1P09601 288 aa10.86□□□□□ -0.67
CRNKL1-201ENST00000377327 PRIM1P49642 420 aaKnown RBP10.86□□□□□ -0.67
CRNKL1-201ENST00000377327 PLEKHH1Q9ULM0 1364 aa10.86□□□□□ -0.67
CRNKL1-201ENST00000377327 VGFO15240 615 aaPredicted RBP10.86□□□□□ -0.67
CRNKL1-201ENST00000377327 PLEKHG5O94827 1062 aa10.86□□□□□ -0.67
CRNKL1-201ENST00000377327 NOLC1Q14978 699 aaKnown RBP eCLIP10.86□□□□□ -0.67
CRNKL1-201ENST00000377327 CCDC183Q5T5S1 534 aa10.86□□□□□ -0.67
CRNKL1-201ENST00000377327 RNF20Q5VTR2 975 aa10.86□□□□□ -0.67
CRNKL1-201ENST00000377327 CHMP4CQ96CF2 233 aa10.86□□□□□ -0.67
CRNKL1-201ENST00000377327 NAT10Q9H0A0 1025 aaKnown RBP10.86□□□□□ -0.67
CRNKL1-201ENST00000377327 FSD2A1L4K1 749 aa10.85□□□□□ -0.67
CRNKL1-201ENST00000377327 MAPK8IP2Q13387 824 aaPredicted RBP10.85□□□□□ -0.67
CRNKL1-201ENST00000377327 EPRSP07814 1512 aaKnown RBP10.85□□□□□ -0.67
CRNKL1-201ENST00000377327 ADCY5O95622 1261 aa10.85□□□□□ -0.67
CRNKL1-201ENST00000377327 UVSSAQ2YD98 709 aa10.85□□□□□ -0.67
CRNKL1-201ENST00000377327 CALCOCO1Q9P1Z2 691 aa10.85□□□□□ -0.67
CRNKL1-201ENST00000377327 PER1O15534 1290 aaPredicted RBP10.84□□□□□ -0.67
CRNKL1-201ENST00000377327 PRKAR2BP31323 418 aa10.84□□□□□ -0.67
CRNKL1-201ENST00000377327 TMPOP42166 694 aaKnown RBP10.84□□□□□ -0.67
CRNKL1-201ENST00000377327 HSP90B2PQ58FF3 399 aa10.84□□□□□ -0.67
CRNKL1-201ENST00000377327 TNMDQ9H2S6 317 aa10.84□□□□□ -0.67
CRNKL1-201ENST00000377327 DISP3Q9P2K9 1392 aa10.84□□□□□ -0.67
CRNKL1-201ENST00000377327 FKBP5Q13451 457 aaPredicted RBP10.84□□□□□ -0.67
CRNKL1-201ENST00000377327 TROQ12816 1431 aaPredicted RBP10.84□□□□□ -0.67
CRNKL1-201ENST00000377327 KRT85P78386 507 aa10.84□□□□□ -0.67
CRNKL1-201ENST00000377327 PDE4CQ08493 712 aa10.84□□□□□ -0.67
CRNKL1-201ENST00000377327 SDF4Q9BRK5 362 aa10.84□□□□□ -0.67
CRNKL1-201ENST00000377327 RPAP2Q8IXW5 612 aaPredicted RBP10.83□□□□□ -0.68
CRNKL1-201ENST00000377327 FBXW7Q969H0 707 aa10.83□□□□□ -0.68
CRNKL1-201ENST00000377327 RALGAPBQ86X10 1494 aa10.83□□□□□ -0.68
CRNKL1-201ENST00000377327 PRG4Q92954 1404 aaPredicted RBP10.83□□□□□ -0.68
CRNKL1-201ENST00000377327 MINK1Q8N4C8 1332 aaPredicted RBP10.83□□□□□ -0.68
CRNKL1-201ENST00000377327 TSPYL1Q9H0U9 437 aa10.83□□□□□ -0.68
CRNKL1-201ENST00000377327 HECW1Q76N89 1606 aa10.83□□□□□ -0.68
CRNKL1-201ENST00000377327 NUCB1Q02818 461 aa10.83□□□□□ -0.68
CRNKL1-201ENST00000377327 GORABQ5T7V8 394 aa10.83□□□□□ -0.68
CRNKL1-201ENST00000377327 AEBP1Q8IUX7 1158 aa10.83□□□□□ -0.68
CRNKL1-201ENST00000377327 GAS2L2Q8NHY3 880 aa10.83□□□□□ -0.68
CRNKL1-201ENST00000377327 COG3Q96JB2 828 aa10.82□□□□□ -0.68
CRNKL1-201ENST00000377327 AK7Q96M32 723 aa10.82□□□□□ -0.68
CRNKL1-201ENST00000377327 NUP62CLQ9H1M0 184 aa10.82□□□□□ -0.68
CRNKL1-201ENST00000377327 POLA1P09884 1462 aaPredicted RBP10.82□□□□□ -0.68
CRNKL1-201ENST00000377327 RBM25P49756 843 aaKnown RBP10.82□□□□□ -0.68
CRNKL1-201ENST00000377327 ALDH1L2Q3SY69 923 aa10.82□□□□□ -0.68
CRNKL1-201ENST00000377327 ZNF830Q96NB3 372 aaPredicted RBP10.82□□□□□ -0.68
CRNKL1-201ENST00000377327 KIF20AO95235 890 aa10.82□□□□□ -0.68
CRNKL1-201ENST00000377327 TNNT1P13805 278 aa10.82□□□□□ -0.68
CRNKL1-201ENST00000377327 RBM42Q9BTD8 480 aaKnown RBP10.82□□□□□ -0.68
CRNKL1-201ENST00000377327 CABP2Q9NPB3 220 aa10.82□□□□□ -0.68
CRNKL1-201ENST00000377327 KINO60870 393 aaKnown RBP10.81□□□□□ -0.68
CRNKL1-201ENST00000377327 GNAI3P08754 354 aa10.81□□□□□ -0.68
CRNKL1-201ENST00000377327 IFIT2P09913 472 aaKnown RBP10.81□□□□□ -0.68
CRNKL1-201ENST00000377327 RLBP1P12271 317 aa10.81□□□□□ -0.68
CRNKL1-201ENST00000377327 MAP3K11Q16584 847 aa10.81□□□□□ -0.68
CRNKL1-201ENST00000377327 TMEM132EQ6IEE7 984 aa10.81□□□□□ -0.68
CRNKL1-201ENST00000377327 ACBD3Q9H3P7 528 aa10.81□□□□□ -0.68
CRNKL1-201ENST00000377327 PLPPR3Q6T4P5 718 aa10.81□□□□□ -0.68
CRNKL1-201ENST00000377327 LEKR1Q6ZMV7 388 aa10.81□□□□□ -0.68
CRNKL1-201ENST00000377327 CCP110O43303 1012 aa10.81□□□□□ -0.68
CRNKL1-201ENST00000377327 PTPN14Q15678 1187 aa10.81□□□□□ -0.68
CRNKL1-201ENST00000377327 HSP90AB4PQ58FF6 505 aa10.81□□□□□ -0.68
CRNKL1-201ENST00000377327 CNTROBQ8N137 903 aa10.81□□□□□ -0.68
CRNKL1-201ENST00000377327 GDPD2Q9HCC8 539 aa10.81□□□□□ -0.68
CRNKL1-201ENST00000377327 CDK13Q14004 1512 aaKnown RBP10.81□□□□□ -0.68
CRNKL1-201ENST00000377327 PSMA5P28066 241 aa10.81□□□□□ -0.68
CRNKL1-201ENST00000377327 C16orf45Q96MC5 204 aaPredicted RBP10.81□□□□□ -0.68
CRNKL1-201ENST00000377327 FILIP1Q7Z7B0 1213 aa10.8□□□□□ -0.68
CRNKL1-201ENST00000377327 UPF3BQ9BZI7 483 aaKnown RBP10.8□□□□□ -0.68
CRNKL1-201ENST00000377327 TPM1P09493 284 aa10.8□□□□□ -0.68
CRNKL1-201ENST00000377327 RBSNQ9H1K0 784 aa10.8□□□□□ -0.68
CRNKL1-201ENST00000377327 TTC12Q9H892 705 aaPredicted RBP10.8□□□□□ -0.68
CRNKL1-201ENST00000377327 LARP1BQ659C4 914 aaKnown RBP10.8□□□□□ -0.68
CRNKL1-201ENST00000377327 TIGD1Q96MW7 591 aa10.8□□□□□ -0.68
CRNKL1-201ENST00000377327 PPP1R9BQ96SB3 815 aa10.8□□□□□ -0.68
CRNKL1-201ENST00000377327 SPINK5Q9NQ38 1064 aaPredicted RBP10.8□□□□□ -0.68
CRNKL1-201ENST00000377327 GNAI2P04899 355 aa10.79□□□□□ -0.68
CRNKL1-201ENST00000377327 HCLS1P14317 486 aaPredicted RBP10.79□□□□□ -0.68
CRNKL1-201ENST00000377327 ZNF445P59923 1031 aa10.79□□□□□ -0.68
CRNKL1-201ENST00000377327 DHX8Q14562 1220 aaKnown RBP10.79□□□□□ -0.68
CRNKL1-201ENST00000377327 NOC3LQ8WTT2 800 aaKnown RBP10.79□□□□□ -0.68
CRNKL1-201ENST00000377327 KIF2AO00139 706 aaPredicted RBP10.79□□□□□ -0.68
CRNKL1-201ENST00000377327 SMC2O95347 1197 aa10.79□□□□□ -0.68
CRNKL1-201ENST00000377327 KIF18AQ8NI77 898 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms