RNA–Protein interactions for RNA: ENST00000376861.5

HLA-F-218, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-218ENST00000376861 A0A1W2PP64 1363 aa23.34■■□□□ 1.33
HLA-F-218ENST00000376861 CPSF1Q10570 1443 aaKnown RBP23.34■■□□□ 1.33
HLA-F-218ENST00000376861 ARHGEF10O15013 1369 aa23.34■■□□□ 1.33
HLA-F-218ENST00000376861 ABTB2Q8N961 1025 aa23.33■■□□□ 1.33
HLA-F-218ENST00000376861 MYOM1P52179 1685 aa23.33■■□□□ 1.33
HLA-F-218ENST00000376861 PLEKHG5O94827 1062 aa23.33■■□□□ 1.32
HLA-F-218ENST00000376861 HAP1P54257 671 aaPredicted RBP23.33■■□□□ 1.32
HLA-F-218ENST00000376861 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.32■■□□□ 1.32
HLA-F-218ENST00000376861 MON2Q7Z3U7 1717 aa23.32■■□□□ 1.32
HLA-F-218ENST00000376861 TRPM3Q9HCF6 1732 aaPredicted RBP23.32■■□□□ 1.32
HLA-F-218ENST00000376861 TTC21AQ8NDW8 1320 aa23.31■■□□□ 1.32
HLA-F-218ENST00000376861 CD163L1Q9NR16 1453 aa23.3■■□□□ 1.32
HLA-F-218ENST00000376861 TTC21BQ7Z4L5 1316 aa23.3■■□□□ 1.32
HLA-F-218ENST00000376861 EDC4Q6P2E9 1401 aaKnown RBP23.29■■□□□ 1.32
HLA-F-218ENST00000376861 PANK3Q9H999 370 aa23.29■■□□□ 1.32
HLA-F-218ENST00000376861 SHPRHQ149N8 1683 aa23.29■■□□□ 1.32
HLA-F-218ENST00000376861 NUTM2BA6NNL0 878 aaPredicted RBP23.28■■□□□ 1.32
HLA-F-218ENST00000376861 NUTM2EB1AL46 878 aaPredicted RBP23.28■■□□□ 1.32
HLA-F-218ENST00000376861 NUTM2GQ5VZR2 741 aa23.28■■□□□ 1.32
HLA-F-218ENST00000376861 DIEXFQ68CQ4 756 aaKnown RBP23.28■■□□□ 1.32
HLA-F-218ENST00000376861 NUTM2AQ8IVF1 878 aaPredicted RBP23.28■■□□□ 1.32
HLA-F-218ENST00000376861 PNPLA6Q8IY17 1366 aa23.28■■□□□ 1.32
HLA-F-218ENST00000376861 SPATA31A6Q5VVP1 1343 aa23.27■■□□□ 1.32
HLA-F-218ENST00000376861 NLRP6P59044 892 aa23.27■■□□□ 1.32
HLA-F-218ENST00000376861 NLRP13Q86W25 1043 aa23.27■■□□□ 1.32
HLA-F-218ENST00000376861 ALS2Q96Q42 1657 aa23.26■■□□□ 1.31
HLA-F-218ENST00000376861 DDX10Q13206 875 aaKnown RBP23.25■■□□□ 1.31
HLA-F-218ENST00000376861 NRKQ7Z2Y5 1582 aa23.24■■□□□ 1.31
HLA-F-218ENST00000376861 NSD3Q9BZ95 1437 aa23.23■■□□□ 1.31
HLA-F-218ENST00000376861 MEX3CQ5U5Q3 659 aaKnown RBP23.23■■□□□ 1.31
HLA-F-218ENST00000376861 KNSTRNQ9Y448 316 aa23.23■■□□□ 1.31
HLA-F-218ENST00000376861 SSH2Q76I76 1423 aa23.23■■□□□ 1.31
HLA-F-218ENST00000376861 CGNL1Q0VF96 1302 aa23.22■■□□□ 1.31
HLA-F-218ENST00000376861 COL22A1Q8NFW1 1626 aaPredicted RBP23.22■■□□□ 1.31
HLA-F-218ENST00000376861 NME9Q86XW9 330 aa23.21■■□□□ 1.31
HLA-F-218ENST00000376861 CABLES1Q8TDN4 633 aa23.21■■□□□ 1.31
HLA-F-218ENST00000376861 CARD14Q9BXL6 1004 aa23.21■■□□□ 1.31
HLA-F-218ENST00000376861 COG3Q96JB2 828 aa23.19■■□□□ 1.3
HLA-F-218ENST00000376861 PIK3C2AO00443 1686 aa23.19■■□□□ 1.3
HLA-F-218ENST00000376861 ADAMTS2O95450 1211 aa23.18■■□□□ 1.3
HLA-F-218ENST00000376861 KIF20BQ96Q89 1820 aa23.17■■□□□ 1.3
HLA-F-218ENST00000376861 MED1Q15648 1581 aaPredicted RBP23.16■■□□□ 1.3
HLA-F-218ENST00000376861 SOX12O15370 315 aa23.16■■□□□ 1.3
HLA-F-218ENST00000376861 KCNH5Q8NCM2 988 aa23.16■■□□□ 1.3
HLA-F-218ENST00000376861 GGNBP2Q9H3C7 697 aa23.15■■□□□ 1.3
HLA-F-218ENST00000376861 FYB1O15117 783 aa23.14■■□□□ 1.3
HLA-F-218ENST00000376861 ZRANB1Q9UGI0 708 aa23.13■■□□□ 1.29
HLA-F-218ENST00000376861 USP31Q70CQ4 1352 aa23.13■■□□□ 1.29
HLA-F-218ENST00000376861 ZBTB7CA1YPR0 619 aa23.13■■□□□ 1.29
HLA-F-218ENST00000376861 GCP02774 474 aa23.13■■□□□ 1.29
HLA-F-218ENST00000376861 ABCA3Q99758 1704 aa23.12■■□□□ 1.29
HLA-F-218ENST00000376861 C8orf37Q96NL8 207 aa23.12■■□□□ 1.29
HLA-F-218ENST00000376861 PHRF1Q9P1Y6 1649 aaKnown RBP23.12■■□□□ 1.29
HLA-F-218ENST00000376861 USP19O94966 1318 aa23.11■■□□□ 1.29
HLA-F-218ENST00000376861 ZC3H6P61129 1189 aaKnown RBP23.11■■□□□ 1.29
HLA-F-218ENST00000376861 CNGB1Q14028 1251 aaPredicted RBP23.1■■□□□ 1.29
HLA-F-218ENST00000376861 NGLY1Q96IV0 654 aa23.1■■□□□ 1.29
HLA-F-218ENST00000376861 PHF23Q9BUL5 403 aaPredicted RBP23.1■■□□□ 1.29
HLA-F-218ENST00000376861 NSD2O96028 1365 aa23.1■■□□□ 1.29
HLA-F-218ENST00000376861 PRDM11Q9NQV5 511 aa23.09■■□□□ 1.29
HLA-F-218ENST00000376861 LRP6O75581 1613 aa23.09■■□□□ 1.29
HLA-F-218ENST00000376861 MARF1Q9Y4F3 1742 aaKnown RBP23.09■■□□□ 1.29
HLA-F-218ENST00000376861 CRYBG1Q9Y4K1 1723 aa23.08■■□□□ 1.29
HLA-F-218ENST00000376861 OVOS2A0A0J9YW53 1432 aa23.07■■□□□ 1.28
HLA-F-218ENST00000376861 OVOS2Q6IE36 1432 aa23.07■■□□□ 1.28
HLA-F-218ENST00000376861 USP54Q70EL1 1684 aa23.07■■□□□ 1.28
HLA-F-218ENST00000376861 SLIT3O75094 1523 aa23.07■■□□□ 1.28
HLA-F-218ENST00000376861 CC2D1BQ5T0F9 858 aaKnown RBP23.07■■□□□ 1.28
HLA-F-218ENST00000376861 MORC1Q86VD1 984 aa23.07■■□□□ 1.28
HLA-F-218ENST00000376861 PER1O15534 1290 aaPredicted RBP23.06■■□□□ 1.28
HLA-F-218ENST00000376861 KIAA0232Q92628 1395 aa23.05■■□□□ 1.28
HLA-F-218ENST00000376861 ANKRD26Q9UPS8 1709 aa23.04■■□□□ 1.28
HLA-F-218ENST00000376861 TNNT2P45379 298 aaPredicted RBP23.03■■□□□ 1.28
HLA-F-218ENST00000376861 AMER1Q5JTC6 1135 aaPredicted RBP23.03■■□□□ 1.28
HLA-F-218ENST00000376861 CHRNA2Q15822 529 aa23.02■■□□□ 1.28
HLA-F-218ENST00000376861 CPDO75976 1380 aa23.01■■□□□ 1.27
HLA-F-218ENST00000376861 FAM83GA6ND36 823 aa23.01■■□□□ 1.27
HLA-F-218ENST00000376861 COL14A1Q05707 1796 aaKnown RBP23■■□□□ 1.27
HLA-F-218ENST00000376861 AFF2P51816 1311 aa23■■□□□ 1.27
HLA-F-218ENST00000376861 AMPHP49418 695 aa23■■□□□ 1.27
HLA-F-218ENST00000376861 ANP32CO43423 234 aa22.99■■□□□ 1.27
HLA-F-218ENST00000376861 EVA1CP58658 441 aa22.99■■□□□ 1.27
HLA-F-218ENST00000376861 USP21Q9UK80 565 aa22.99■■□□□ 1.27
HLA-F-218ENST00000376861 LTN1O94822 1766 aa22.99■■□□□ 1.27
HLA-F-218ENST00000376861 NPC1L1Q9UHC9 1359 aa22.99■■□□□ 1.27
HLA-F-218ENST00000376861 ARHGEF25Q86VW2 580 aa22.98■■□□□ 1.27
HLA-F-218ENST00000376861 BTG4Q9NY30 223 aa22.98■■□□□ 1.27
HLA-F-218ENST00000376861 NFAT5O94916 1531 aa22.98■■□□□ 1.27
HLA-F-218ENST00000376861 PPM1GO15355 546 aaPredicted RBP22.98■■□□□ 1.27
HLA-F-218ENST00000376861 ZNF772Q68DY9 489 aaPredicted RBP22.98■■□□□ 1.27
HLA-F-218ENST00000376861 RRS1Q15050 365 aaKnown RBP22.97■■□□□ 1.27
HLA-F-218ENST00000376861 FBLN1P23142 703 aa22.96■■□□□ 1.27
HLA-F-218ENST00000376861 PLCH1Q4KWH8 1693 aa22.96■■□□□ 1.27
HLA-F-218ENST00000376861 FNBP4Q8N3X1 1017 aaPredicted RBP22.95■■□□□ 1.26
HLA-F-218ENST00000376861 AATKQ6ZMQ8 1374 aa22.95■■□□□ 1.26
HLA-F-218ENST00000376861 MIER1Q8N108 512 aa22.94■■□□□ 1.26
HLA-F-218ENST00000376861 STRN4Q9NRL3 753 aa22.94■■□□□ 1.26
HLA-F-218ENST00000376861 CCDC9Q9Y3X0 531 aaKnown RBP22.94■■□□□ 1.26
HLA-F-218ENST00000376861 MAP2P11137 1827 aaKnown RBP22.94■■□□□ 1.26
HLA-F-218ENST00000376861 MAP3K19Q56UN5 1328 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms