RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 PLEKHG1Q9ULL1 1385 aa28.26■■■□□ 2.11
RNF39-202ENST00000376751 FER1L4A9Z1Z3 1794 aa28.26■■■□□ 2.11
RNF39-202ENST00000376751 NCKAP5LQ9HCH0 1330 aa28.26■■■□□ 2.11
RNF39-202ENST00000376751 EDC4Q6P2E9 1401 aaKnown RBP28.26■■■□□ 2.11
RNF39-202ENST00000376751 NCBP3Q53F19 620 aaKnown RBP28.26■■■□□ 2.11
RNF39-202ENST00000376751 AKAP12Q02952 1782 aa28.25■■■□□ 2.11
RNF39-202ENST00000376751 NUDT16Q96DE0 195 aaKnown RBP28.24■■■□□ 2.11
RNF39-202ENST00000376751 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.24■■■□□ 2.11
RNF39-202ENST00000376751 KDM2BQ8NHM5 1336 aa28.23■■■□□ 2.11
RNF39-202ENST00000376751 MAP2P11137 1827 aaKnown RBP28.23■■■□□ 2.11
RNF39-202ENST00000376751 FBLN1P23142 703 aa28.23■■■□□ 2.11
RNF39-202ENST00000376751 ITSN1Q15811 1721 aa28.22■■■□□ 2.11
RNF39-202ENST00000376751 PRR36Q9H6K5 1346 aa28.21■■■□□ 2.11
RNF39-202ENST00000376751 TCERG1O14776 1098 aaKnown RBP28.2■■■□□ 2.11
RNF39-202ENST00000376751 DIAPH1O60610 1272 aaKnown RBP28.2■■■□□ 2.11
RNF39-202ENST00000376751 SKAP1Q86WV1 359 aa28.2■■■□□ 2.1
RNF39-202ENST00000376751 POLKQ9UBT6 870 aa28.2■■■□□ 2.1
RNF39-202ENST00000376751 NME9Q86XW9 330 aa28.19■■■□□ 2.1
RNF39-202ENST00000376751 PTPRUQ92729 1446 aa28.18■■■□□ 2.1
RNF39-202ENST00000376751 ARHGAP23Q9P227 1491 aa28.18■■■□□ 2.1
RNF39-202ENST00000376751 SLIT1O75093 1534 aa28.18■■■□□ 2.1
RNF39-202ENST00000376751 LRRC7Q96NW7 1537 aa28.18■■■□□ 2.1
RNF39-202ENST00000376751 TMPOP42166 694 aaKnown RBP28.18■■■□□ 2.1
RNF39-202ENST00000376751 ZRANB1Q9UGI0 708 aa28.18■■■□□ 2.1
RNF39-202ENST00000376751 CCDC61Q9Y6R9 512 aa28.17■■■□□ 2.1
RNF39-202ENST00000376751 RARSP54136 660 aaKnown RBP28.17■■■□□ 2.1
RNF39-202ENST00000376751 TOPAZ1Q8N9V7 1692 aa28.16■■■□□ 2.1
RNF39-202ENST00000376751 TRIM35Q9UPQ4 493 aa28.16■■■□□ 2.1
RNF39-202ENST00000376751 ANP32EQ9BTT0 268 aa28.15■■■□□ 2.1
RNF39-202ENST00000376751 PLPPR3Q6T4P5 718 aa28.15■■■□□ 2.1
RNF39-202ENST00000376751 MAPK8IP3Q9UPT6 1336 aa28.14■■■□□ 2.1
RNF39-202ENST00000376751 MYH16Q9H6N6 1097 aa28.13■■■□□ 2.09
RNF39-202ENST00000376751 PDE3AQ14432 1141 aa28.13■■■□□ 2.09
RNF39-202ENST00000376751 SLC26A8Q96RN1 970 aa28.13■■■□□ 2.09
RNF39-202ENST00000376751 PPM1GO15355 546 aaPredicted RBP28.12■■■□□ 2.09
RNF39-202ENST00000376751 CENPQQ7L2Z9 268 aaPredicted RBP28.12■■■□□ 2.09
RNF39-202ENST00000376751 EMILIN1Q9Y6C2 1016 aa28.12■■■□□ 2.09
RNF39-202ENST00000376751 NRKQ7Z2Y5 1582 aa28.12■■■□□ 2.09
RNF39-202ENST00000376751 MS4A1P11836 297 aa28.11■■■□□ 2.09
RNF39-202ENST00000376751 PANK1Q8TE04 598 aa28.11■■■□□ 2.09
RNF39-202ENST00000376751 CDK12Q9NYV4 1490 aaPredicted RBP28.1■■■□□ 2.09
RNF39-202ENST00000376751 CANXP27824 592 aaKnown RBP28.09■■■□□ 2.09
RNF39-202ENST00000376751 TSR2Q969E8 191 aaKnown RBP28.09■■■□□ 2.09
RNF39-202ENST00000376751 EID1Q9Y6B2 187 aa28.09■■■□□ 2.09
RNF39-202ENST00000376751 AATKQ6ZMQ8 1374 aa28.09■■■□□ 2.09
RNF39-202ENST00000376751 RSPH6AQ9H0K4 717 aa28.08■■■□□ 2.09
RNF39-202ENST00000376751 FRAT1Q92837 279 aaPredicted RBP28.08■■■□□ 2.09
RNF39-202ENST00000376751 BCL2L13Q9BXK5 485 aa28.07■■■□□ 2.08
RNF39-202ENST00000376751 FCHSD2O94868 740 aa28.06■■■□□ 2.08
RNF39-202ENST00000376751 PDE4AP27815 886 aa28.06■■■□□ 2.08
RNF39-202ENST00000376751 TNNQ9UQP3 1299 aa28.06■■■□□ 2.08
RNF39-202ENST00000376751 RIPK4P57078 832 aa28.06■■■□□ 2.08
RNF39-202ENST00000376751 COG6Q9Y2V7 657 aa28.06■■■□□ 2.08
RNF39-202ENST00000376751 COG3Q96JB2 828 aa28.05■■■□□ 2.08
RNF39-202ENST00000376751 PRKAR2BP31323 418 aa28.04■■■□□ 2.08
RNF39-202ENST00000376751 TRHP20396 242 aaPredicted RBP28.04■■■□□ 2.08
RNF39-202ENST00000376751 IL13P35225 146 aa28.03■■■□□ 2.08
RNF39-202ENST00000376751 ZNF692Q9BU19 519 aaPredicted RBP28.03■■■□□ 2.08
RNF39-202ENST00000376751 BACH2Q9BYV9 841 aa28.03■■■□□ 2.08
RNF39-202ENST00000376751 PNNQ9H307 717 aaKnown RBP28.03■■■□□ 2.08
RNF39-202ENST00000376751 IL16Q14005 1332 aa28.03■■■□□ 2.08
RNF39-202ENST00000376751 RLBP1P12271 317 aa28.02■■■□□ 2.08
RNF39-202ENST00000376751 NUTM2FA1L443 756 aa28.02■■■□□ 2.08
RNF39-202ENST00000376751 AMOTL2Q9Y2J4 779 aa28.02■■■□□ 2.08
RNF39-202ENST00000376751 DIP2AQ14689 1571 aa28.02■■■□□ 2.08
RNF39-202ENST00000376751 PTCH1Q13635 1447 aa28.01■■■□□ 2.08
RNF39-202ENST00000376751 RRS1Q15050 365 aaKnown RBP28.01■■■□□ 2.07
RNF39-202ENST00000376751 HMOX1P09601 288 aa28■■■□□ 2.07
RNF39-202ENST00000376751 EXOSC9Q06265 439 aaKnown RBP28■■■□□ 2.07
RNF39-202ENST00000376751 TBX22Q9Y458 520 aa28■■■□□ 2.07
RNF39-202ENST00000376751 ACEP12821 1306 aa28■■■□□ 2.07
RNF39-202ENST00000376751 PLEKHG3A1L390 1219 aa27.99■■■□□ 2.07
RNF39-202ENST00000376751 TTC21BQ7Z4L5 1316 aa27.99■■■□□ 2.07
RNF39-202ENST00000376751 XRN1Q8IZH2 1706 aaKnown RBP27.99■■■□□ 2.07
RNF39-202ENST00000376751 CLUAP1Q96AJ1 413 aa27.99■■■□□ 2.07
RNF39-202ENST00000376751 PHACTR3Q96KR7 559 aa27.99■■■□□ 2.07
RNF39-202ENST00000376751 USP6P35125 1406 aa27.98■■■□□ 2.07
RNF39-202ENST00000376751 THEMISQ8N1K5 641 aaPredicted RBP27.98■■■□□ 2.07
RNF39-202ENST00000376751 IGHDP01880 384 aa27.97■■■□□ 2.07
RNF39-202ENST00000376751 CT47B1P0C2W7 299 aaPredicted RBP27.97■■■□□ 2.07
RNF39-202ENST00000376751 NALCNQ8IZF0 1738 aa27.97■■■□□ 2.07
RNF39-202ENST00000376751 OVOS2A0A0J9YW53 1432 aa27.96■■■□□ 2.07
RNF39-202ENST00000376751 OVOS2Q6IE36 1432 aa27.96■■■□□ 2.07
RNF39-202ENST00000376751 ANP32AP39687 249 aaKnown RBP27.95■■■□□ 2.07
RNF39-202ENST00000376751 CEP170BQ9Y4F5 1589 aaPredicted RBP27.95■■■□□ 2.06
RNF39-202ENST00000376751 RGPD8O14715 1765 aaPredicted RBP27.95■■■□□ 2.06
RNF39-202ENST00000376751 RIMS1Q86UR5 1692 aaKnown RBP27.94■■■□□ 2.06
RNF39-202ENST00000376751 NFE2L2Q16236 605 aa27.94■■■□□ 2.06
RNF39-202ENST00000376751 DLG5Q8TDM6 1919 aa27.93■■■□□ 2.06
RNF39-202ENST00000376751 SSH2Q76I76 1423 aa27.93■■■□□ 2.06
RNF39-202ENST00000376751 PEAK1Q9H792 1746 aa27.91■■■□□ 2.06
RNF39-202ENST00000376751 SSH1Q8WYL5 1049 aa27.91■■■□□ 2.06
RNF39-202ENST00000376751 SMC4Q9NTJ3 1288 aa27.9■■■□□ 2.06
RNF39-202ENST00000376751 NEFMP07197 916 aa27.89■■■□□ 2.06
RNF39-202ENST00000376751 ZKSCAN2Q63HK3 967 aa27.89■■■□□ 2.06
RNF39-202ENST00000376751 IPO9Q96P70 1041 aaKnown RBP27.89■■■□□ 2.06
RNF39-202ENST00000376751 ERICH6Q7L0X2 663 aa27.88■■■□□ 2.05
RNF39-202ENST00000376751 THUMPD2Q9BTF0 503 aaKnown RBP27.88■■■□□ 2.05
RNF39-202ENST00000376751 NPM2Q86SE8 214 aaKnown RBP27.87■■■□□ 2.05
RNF39-202ENST00000376751 NOP58Q9Y2X3 529 aaKnown RBP27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms