RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 SLC4A2P04920 1241 aa14.61□□□□□ -0.07
DDR1-227ENST00000376570 STK31Q9BXU1 1019 aa14.61□□□□□ -0.07
DDR1-227ENST00000376570 DDX19BQ9UMR2 479 aa14.61□□□□□ -0.07
DDR1-227ENST00000376570 MAP4K4O95819 1239 aaPredicted RBP14.61□□□□□ -0.07
DDR1-227ENST00000376570 CCDC61Q9Y6R9 512 aa14.61□□□□□ -0.07
DDR1-227ENST00000376570 A0A1W2PP64 1363 aa14.61□□□□□ -0.07
DDR1-227ENST00000376570 STAC3Q96MF2 364 aa14.6□□□□□ -0.07
DDR1-227ENST00000376570 POLKQ9UBT6 870 aa14.6□□□□□ -0.07
DDR1-227ENST00000376570 NPATQ14207 1427 aa14.59□□□□□ -0.07
DDR1-227ENST00000376570 ZC3H6P61129 1189 aaKnown RBP14.59□□□□□ -0.07
DDR1-227ENST00000376570 WASLO00401 505 aaPredicted RBP14.58□□□□□ -0.07
DDR1-227ENST00000376570 PDE3AQ14432 1141 aa14.58□□□□□ -0.07
DDR1-227ENST00000376570 C8orf58Q8NAV2 365 aa14.58□□□□□ -0.07
DDR1-227ENST00000376570 C22orf23Q9BZE7 217 aa14.58□□□□□ -0.07
DDR1-227ENST00000376570 AMOTL2Q9Y2J4 779 aa14.58□□□□□ -0.07
DDR1-227ENST00000376570 CHMP3Q9Y3E7 222 aa14.58□□□□□ -0.08
DDR1-227ENST00000376570 NKTRP30414 1462 aaKnown RBP14.57□□□□□ -0.08
DDR1-227ENST00000376570 ASXL1Q8IXJ9 1541 aa14.57□□□□□ -0.08
DDR1-227ENST00000376570 PLCB2Q00722 1185 aa14.57□□□□□ -0.08
DDR1-227ENST00000376570 NAP1L2Q9ULW6 460 aaPredicted RBP14.57□□□□□ -0.08
DDR1-227ENST00000376570 ATP7AQ04656 1500 aa14.56□□□□□ -0.08
DDR1-227ENST00000376570 WDR63Q8IWG1 891 aa14.56□□□□□ -0.08
DDR1-227ENST00000376570 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.56□□□□□ -0.08
DDR1-227ENST00000376570 EXOC6BQ9Y2D4 811 aa14.56□□□□□ -0.08
DDR1-227ENST00000376570 GNAI1P63096 354 aa14.56□□□□□ -0.08
DDR1-227ENST00000376570 C8orf34Q49A92 452 aa14.56□□□□□ -0.08
DDR1-227ENST00000376570 C16orf71Q8IYS4 520 aaPredicted RBP14.56□□□□□ -0.08
DDR1-227ENST00000376570 MBIPQ9NS73 344 aa14.56□□□□□ -0.08
DDR1-227ENST00000376570 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.55□□□□□ -0.08
DDR1-227ENST00000376570 IL1RAPL2Q9NP60 686 aa14.55□□□□□ -0.08
DDR1-227ENST00000376570 ACEP12821 1306 aa14.55□□□□□ -0.08
DDR1-227ENST00000376570 DDX54Q8TDD1 881 aaKnown RBP14.54□□□□□ -0.08
DDR1-227ENST00000376570 KCNJ4P48050 445 aa14.54□□□□□ -0.08
DDR1-227ENST00000376570 NFE2L2Q16236 605 aa14.54□□□□□ -0.08
DDR1-227ENST00000376570 RPGRIP1LQ68CZ1 1315 aa14.54□□□□□ -0.08
DDR1-227ENST00000376570 JARID2Q92833 1246 aaPredicted RBP14.54□□□□□ -0.08
DDR1-227ENST00000376570 ADGBQ8N7X0 1667 aa14.54□□□□□ -0.08
DDR1-227ENST00000376570 KDM5DQ9BY66 1539 aa14.53□□□□□ -0.08
DDR1-227ENST00000376570 PIP4K2AP48426 406 aaPredicted RBP14.53□□□□□ -0.08
DDR1-227ENST00000376570 LARP6Q9BRS8 491 aaKnown RBP14.53□□□□□ -0.08
DDR1-227ENST00000376570 MAST1Q9Y2H9 1570 aa14.53□□□□□ -0.08
DDR1-227ENST00000376570 ZNF518AQ6AHZ1 1483 aa14.53□□□□□ -0.08
DDR1-227ENST00000376570 CALD1Q05682 793 aaKnown RBP14.53□□□□□ -0.08
DDR1-227ENST00000376570 RBM42Q9BTD8 480 aaKnown RBP14.53□□□□□ -0.08
DDR1-227ENST00000376570 TRIM35Q9UPQ4 493 aa14.53□□□□□ -0.08
DDR1-227ENST00000376570 CDC42BPBQ9Y5S2 1711 aa14.52□□□□□ -0.08
DDR1-227ENST00000376570 RNF123Q5XPI4 1314 aa14.52□□□□□ -0.08
DDR1-227ENST00000376570 TEFQ10587 303 aa14.52□□□□□ -0.08
DDR1-227ENST00000376570 ARID3AQ99856 593 aa14.52□□□□□ -0.09
DDR1-227ENST00000376570 NLRP2Q9NX02 1062 aa14.52□□□□□ -0.09
DDR1-227ENST00000376570 KIF16BQ96L93 1317 aa14.51□□□□□ -0.09
DDR1-227ENST00000376570 FCHSD2O94868 740 aa14.51□□□□□ -0.09
DDR1-227ENST00000376570 PTPRTO14522 1441 aa14.5□□□□□ -0.09
DDR1-227ENST00000376570 PRDM15P57071 1507 aaPredicted RBP14.5□□□□□ -0.09
DDR1-227ENST00000376570 ZCCHC11Q5TAX3 1644 aaKnown RBP14.5□□□□□ -0.09
DDR1-227ENST00000376570 LMOD3Q0VAK6 560 aa14.5□□□□□ -0.09
DDR1-227ENST00000376570 DDX17Q92841 729 aaKnown RBP14.5□□□□□ -0.09
DDR1-227ENST00000376570 LTKP29376 864 aa14.49□□□□□ -0.09
DDR1-227ENST00000376570 CASC1Q6TDU7 716 aa14.49□□□□□ -0.09
DDR1-227ENST00000376570 ERVK-7P63135 1459 aa14.49□□□□□ -0.09
DDR1-227ENST00000376570 MPRIPQ6WCQ1 1025 aa14.49□□□□□ -0.09
DDR1-227ENST00000376570 LRRC59Q96AG4 307 aaKnown RBP14.48□□□□□ -0.09
DDR1-227ENST00000376570 MPNDQ8N594 471 aa14.48□□□□□ -0.09
DDR1-227ENST00000376570 OTUD7AQ8TE49 926 aaPredicted RBP14.48□□□□□ -0.09
DDR1-227ENST00000376570 ANO2Q9NQ90 1003 aa14.48□□□□□ -0.09
DDR1-227ENST00000376570 MYO5CQ9NQX4 1742 aa14.48□□□□□ -0.09
DDR1-227ENST00000376570 CHD1LQ86WJ1 897 aa14.48□□□□□ -0.09
DDR1-227ENST00000376570 ANKRD36BQ8N2N9 1353 aa14.47□□□□□ -0.09
DDR1-227ENST00000376570 EIF4A2Q14240 407 aaKnown RBP14.47□□□□□ -0.09
DDR1-227ENST00000376570 PREX2Q70Z35 1606 aa14.47□□□□□ -0.09
DDR1-227ENST00000376570 SIL1Q9H173 461 aa14.47□□□□□ -0.09
DDR1-227ENST00000376570 MYL6BP14649 208 aa14.47□□□□□ -0.09
DDR1-227ENST00000376570 CABLES1Q8TDN4 633 aa14.47□□□□□ -0.09
DDR1-227ENST00000376570 MEIS3Q99687 375 aa14.47□□□□□ -0.09
DDR1-227ENST00000376570 ARHGEF5Q12774 1597 aa14.46□□□□□ -0.09
DDR1-227ENST00000376570 G2E3Q7L622 706 aa14.46□□□□□ -0.1
DDR1-227ENST00000376570 API5Q9BZZ5 524 aaKnown RBP14.46□□□□□ -0.1
DDR1-227ENST00000376570 TBC1D2Q9BYX2 928 aa14.45□□□□□ -0.1
DDR1-227ENST00000376570 KCNA6P17658 529 aa14.45□□□□□ -0.1
DDR1-227ENST00000376570 ABCC1P33527 1531 aa14.45□□□□□ -0.1
DDR1-227ENST00000376570 PROSER2Q86WR7 435 aaPredicted RBP14.45□□□□□ -0.1
DDR1-227ENST00000376570 CCDC85AQ96PX6 553 aaPredicted RBP14.45□□□□□ -0.1
DDR1-227ENST00000376570 HDGFL1Q5TGJ6 251 aa14.45□□□□□ -0.1
DDR1-227ENST00000376570 NUTM1Q86Y26 1132 aa14.45□□□□□ -0.1
DDR1-227ENST00000376570 CHRNA2Q15822 529 aa14.44□□□□□ -0.1
DDR1-227ENST00000376570 TRIM44Q96DX7 344 aaPredicted RBP14.44□□□□□ -0.1
DDR1-227ENST00000376570 PPIP5K1Q6PFW1 1433 aa14.44□□□□□ -0.1
DDR1-227ENST00000376570 SURF6O75683 361 aaKnown RBP14.44□□□□□ -0.1
DDR1-227ENST00000376570 FOSBP53539 338 aa14.44□□□□□ -0.1
DDR1-227ENST00000376570 SYTL4Q96C24 671 aaPredicted RBP14.44□□□□□ -0.1
DDR1-227ENST00000376570 C9orf78Q9NZ63 289 aaPredicted RBP14.44□□□□□ -0.1
DDR1-227ENST00000376570 KAT6BQ8WYB5 2073 aa14.43□□□□□ -0.1
DDR1-227ENST00000376570 YTHDC2Q9H6S0 1430 aaKnown RBP14.43□□□□□ -0.1
DDR1-227ENST00000376570 KDM2BQ8NHM5 1336 aa14.43□□□□□ -0.1
DDR1-227ENST00000376570 C1orf141Q5JVX7 400 aa14.43□□□□□ -0.1
DDR1-227ENST00000376570 ZNF530Q6P9A1 599 aaPredicted RBP14.43□□□□□ -0.1
DDR1-227ENST00000376570 RSPH6AQ9H0K4 717 aa14.43□□□□□ -0.1
DDR1-227ENST00000376570 RIMS2Q9UQ26 1411 aa14.43□□□□□ -0.1
DDR1-227ENST00000376570 METP08581 1390 aa14.43□□□□□ -0.1
DDR1-227ENST00000376570 TSPOAP1O95153 1857 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms