RNA–Protein interactions for RNA: ENST00000376384.9

PAAF1-202, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 5 BASIC

Gene PAAF1, Length 1,500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-202ENST00000376384 CCDC146Q8IYE0 955 aa11.11□□□□□ -0.63
PAAF1-202ENST00000376384 CABP1Q9NZU7 370 aa11.11□□□□□ -0.63
PAAF1-202ENST00000376384 ZNF521Q96K83 1311 aa11.11□□□□□ -0.63
PAAF1-202ENST00000376384 PTCH1Q13635 1447 aa11.11□□□□□ -0.63
PAAF1-202ENST00000376384 NRKQ7Z2Y5 1582 aa11.11□□□□□ -0.63
PAAF1-202ENST00000376384 ANKLE2Q86XL3 938 aa11.1□□□□□ -0.63
PAAF1-202ENST00000376384 CDCA7LQ96GN5 454 aa11.1□□□□□ -0.63
PAAF1-202ENST00000376384 TBX22Q9Y458 520 aa11.1□□□□□ -0.63
PAAF1-202ENST00000376384 GGNBP2Q9H3C7 697 aa11.09□□□□□ -0.63
PAAF1-202ENST00000376384 ROBO2Q9HCK4 1378 aa11.09□□□□□ -0.63
PAAF1-202ENST00000376384 CPSF1Q10570 1443 aaKnown RBP11.09□□□□□ -0.63
PAAF1-202ENST00000376384 PTPRUQ92729 1446 aa11.09□□□□□ -0.63
PAAF1-202ENST00000376384 APAF1O14727 1248 aa11.09□□□□□ -0.63
PAAF1-202ENST00000376384 COL3A1P02461 1466 aaPredicted RBP11.09□□□□□ -0.63
PAAF1-202ENST00000376384 SLC4A2P04920 1241 aa11.09□□□□□ -0.63
PAAF1-202ENST00000376384 RGPD8O14715 1765 aaPredicted RBP11.08□□□□□ -0.64
PAAF1-202ENST00000376384 NKTRP30414 1462 aaKnown RBP11.08□□□□□ -0.64
PAAF1-202ENST00000376384 FYB1O15117 783 aa11.08□□□□□ -0.64
PAAF1-202ENST00000376384 VSIG10Q8N0Z9 540 aa11.08□□□□□ -0.64
PAAF1-202ENST00000376384 RUNDC1Q96C34 613 aa11.08□□□□□ -0.64
PAAF1-202ENST00000376384 CCDC61Q9Y6R9 512 aa11.08□□□□□ -0.64
PAAF1-202ENST00000376384 CHD2O14647 1828 aaKnown RBP11.07□□□□□ -0.64
PAAF1-202ENST00000376384 NUDT16Q96DE0 195 aaKnown RBP11.07□□□□□ -0.64
PAAF1-202ENST00000376384 NALCNQ8IZF0 1738 aa11.07□□□□□ -0.64
PAAF1-202ENST00000376384 PIK3R4Q99570 1358 aa11.06□□□□□ -0.64
PAAF1-202ENST00000376384 E9PSI1 815 aa11.06□□□□□ -0.64
PAAF1-202ENST00000376384 DUSP27Q5VZP5 1158 aa11.06□□□□□ -0.64
PAAF1-202ENST00000376384 AMOTL2Q9Y2J4 779 aa11.06□□□□□ -0.64
PAAF1-202ENST00000376384 NPHP4O75161 1426 aaPredicted RBP11.06□□□□□ -0.64
PAAF1-202ENST00000376384 SLFN5Q08AF3 891 aa11.05□□□□□ -0.64
PAAF1-202ENST00000376384 B4GALNT3Q6L9W6 998 aa11.05□□□□□ -0.64
PAAF1-202ENST00000376384 CDK12Q9NYV4 1490 aaPredicted RBP11.05□□□□□ -0.64
PAAF1-202ENST00000376384 FMN2Q9NZ56 1722 aa11.05□□□□□ -0.64
PAAF1-202ENST00000376384 U2AF1L5P0DN76 240 aaPredicted RBP11.04□□□□□ -0.64
PAAF1-202ENST00000376384 U2AF1Q01081 240 aaKnown RBP eCLIP11.04□□□□□ -0.64
PAAF1-202ENST00000376384 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.04□□□□□ -0.64
PAAF1-202ENST00000376384 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.04□□□□□ -0.64
PAAF1-202ENST00000376384 CCDC136Q96JN2 1154 aa11.04□□□□□ -0.64
PAAF1-202ENST00000376384 ZNF692Q9BU19 519 aaPredicted RBP11.04□□□□□ -0.64
PAAF1-202ENST00000376384 PNNQ9H307 717 aaKnown RBP11.04□□□□□ -0.64
PAAF1-202ENST00000376384 TSHZ2Q9NRE2 1034 aa11.04□□□□□ -0.64
PAAF1-202ENST00000376384 PNPLA6Q8IY17 1366 aa11.03□□□□□ -0.64
PAAF1-202ENST00000376384 KDM4FA0A1W2PPD8 638 aa11.03□□□□□ -0.64
PAAF1-202ENST00000376384 CCDC27Q2M243 656 aa11.03□□□□□ -0.64
PAAF1-202ENST00000376384 AATKQ6ZMQ8 1374 aa11.02□□□□□ -0.64
PAAF1-202ENST00000376384 LRRC7Q96NW7 1537 aa11.02□□□□□ -0.64
PAAF1-202ENST00000376384 NCKAP5LQ9HCH0 1330 aa11.02□□□□□ -0.65
PAAF1-202ENST00000376384 MAPK8IP3Q9UPT6 1336 aa11.02□□□□□ -0.65
PAAF1-202ENST00000376384 U2SURPO15042 1029 aaKnown RBP11.02□□□□□ -0.65
PAAF1-202ENST00000376384 DIAPH1O60610 1272 aaKnown RBP11.02□□□□□ -0.65
PAAF1-202ENST00000376384 WWC1Q8IX03 1113 aa11.02□□□□□ -0.65
PAAF1-202ENST00000376384 TRMT2AQ8IZ69 625 aaKnown RBP11.02□□□□□ -0.65
PAAF1-202ENST00000376384 TCP11L2Q8N4U5 519 aa11.02□□□□□ -0.65
PAAF1-202ENST00000376384 COG3Q96JB2 828 aa11.02□□□□□ -0.65
PAAF1-202ENST00000376384 RNF216Q9NWF9 866 aaPredicted RBP11.02□□□□□ -0.65
PAAF1-202ENST00000376384 PRR36Q9H6K5 1346 aa11.01□□□□□ -0.65
PAAF1-202ENST00000376384 KCNA6P17658 529 aa11.01□□□□□ -0.65
PAAF1-202ENST00000376384 USP6P35125 1406 aa11□□□□□ -0.65
PAAF1-202ENST00000376384 ANKARQ7Z5J8 1434 aa11□□□□□ -0.65
PAAF1-202ENST00000376384 DLG5Q8TDM6 1919 aa11□□□□□ -0.65
PAAF1-202ENST00000376384 NEFMP07197 916 aa11□□□□□ -0.65
PAAF1-202ENST00000376384 WDR63Q8IWG1 891 aa11□□□□□ -0.65
PAAF1-202ENST00000376384 NWD1Q149M9 1564 aa11□□□□□ -0.65
PAAF1-202ENST00000376384 NEUROD2Q15784 382 aa10.99□□□□□ -0.65
PAAF1-202ENST00000376384 NME9Q86XW9 330 aa10.99□□□□□ -0.65
PAAF1-202ENST00000376384 USP54Q70EL1 1684 aa10.99□□□□□ -0.65
PAAF1-202ENST00000376384 PLEKHG3A1L390 1219 aa10.99□□□□□ -0.65
PAAF1-202ENST00000376384 MAPK8IP2Q13387 824 aaPredicted RBP10.99□□□□□ -0.65
PAAF1-202ENST00000376384 LMTK3Q96Q04 1460 aa10.99□□□□□ -0.65
PAAF1-202ENST00000376384 ACEP12821 1306 aa10.98□□□□□ -0.65
PAAF1-202ENST00000376384 OVOS2A0A0J9YW53 1432 aa10.98□□□□□ -0.65
PAAF1-202ENST00000376384 OVOS2Q6IE36 1432 aa10.98□□□□□ -0.65
PAAF1-202ENST00000376384 PPM1GO15355 546 aaPredicted RBP10.98□□□□□ -0.65
PAAF1-202ENST00000376384 MYCNP04198 464 aaPredicted RBP10.98□□□□□ -0.65
PAAF1-202ENST00000376384 EXOC6Q8TAG9 804 aa10.98□□□□□ -0.65
PAAF1-202ENST00000376384 MYH16Q9H6N6 1097 aa10.98□□□□□ -0.65
PAAF1-202ENST00000376384 POLKQ9UBT6 870 aa10.98□□□□□ -0.65
PAAF1-202ENST00000376384 RRP7AQ9Y3A4 280 aaKnown RBP10.98□□□□□ -0.65
PAAF1-202ENST00000376384 PIK3C2AO00443 1686 aa10.97□□□□□ -0.65
PAAF1-202ENST00000376384 TTC21BQ7Z4L5 1316 aa10.97□□□□□ -0.65
PAAF1-202ENST00000376384 TTC21AQ8NDW8 1320 aa10.97□□□□□ -0.65
PAAF1-202ENST00000376384 NUTM2FA1L443 756 aa10.96□□□□□ -0.65
PAAF1-202ENST00000376384 PLIN1O60240 522 aa10.96□□□□□ -0.65
PAAF1-202ENST00000376384 FCHSD2O94868 740 aa10.96□□□□□ -0.65
PAAF1-202ENST00000376384 HSPA2P54652 639 aa10.96□□□□□ -0.65
PAAF1-202ENST00000376384 PLEKHF1Q96S99 279 aa10.96□□□□□ -0.65
PAAF1-202ENST00000376384 SPINK5Q9NQ38 1064 aaPredicted RBP10.96□□□□□ -0.65
PAAF1-202ENST00000376384 STRCQ7RTU9 1775 aa10.95□□□□□ -0.66
PAAF1-202ENST00000376384 TULP1O00294 542 aaPredicted RBP10.94□□□□□ -0.66
PAAF1-202ENST00000376384 RGPD1P0DJD0 1748 aa10.94□□□□□ -0.66
PAAF1-202ENST00000376384 TMPOP42166 694 aaKnown RBP10.94□□□□□ -0.66
PAAF1-202ENST00000376384 CRBNQ96SW2 442 aa10.94□□□□□ -0.66
PAAF1-202ENST00000376384 PEAK1Q9H792 1746 aa10.94□□□□□ -0.66
PAAF1-202ENST00000376384 ADGRL3Q9HAR2 1447 aa10.94□□□□□ -0.66
PAAF1-202ENST00000376384 MARF1Q9Y4F3 1742 aaKnown RBP10.94□□□□□ -0.66
PAAF1-202ENST00000376384 DMRT2Q9Y5R5 561 aa10.94□□□□□ -0.66
PAAF1-202ENST00000376384 SSH2Q76I76 1423 aa10.94□□□□□ -0.66
PAAF1-202ENST00000376384 STRCP1A6NGW2 1772 aa10.94□□□□□ -0.66
PAAF1-202ENST00000376384 CANXP27824 592 aaKnown RBP10.94□□□□□ -0.66
PAAF1-202ENST00000376384 ARXQ96QS3 562 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms