RNA–Protein interactions for RNA: ENST00000376108.7

CLCN5-204, Transcript of chloride voltage-gated channel 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN5, Length 2,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN5-204ENST00000376108 DEF6Q9H4E7 631 aa10.74□□□□□ -0.69
CLCN5-204ENST00000376108 SPTLC3Q9NUV7 552 aa10.74□□□□□ -0.69
CLCN5-204ENST00000376108 GOLGA6L22H0YM25 854 aa10.73□□□□□ -0.69
CLCN5-204ENST00000376108 SYT10Q6XYQ8 523 aa10.73□□□□□ -0.69
CLCN5-204ENST00000376108 PLEKHD1A6NEE1 506 aa10.73□□□□□ -0.69
CLCN5-204ENST00000376108 KIF3CO14782 793 aa10.73□□□□□ -0.69
CLCN5-204ENST00000376108 PPP2R5AQ15172 486 aa10.73□□□□□ -0.69
CLCN5-204ENST00000376108 C11orf91Q3C1V1 193 aa10.73□□□□□ -0.69
CLCN5-204ENST00000376108 MAPK8IP3Q9UPT6 1336 aa10.73□□□□□ -0.69
CLCN5-204ENST00000376108 ZSCAN23Q3MJ62 389 aa10.72□□□□□ -0.69
CLCN5-204ENST00000376108 ZC3H12AQ5D1E8 599 aaKnown RBP10.72□□□□□ -0.69
CLCN5-204ENST00000376108 SWT1Q5T5J6 900 aaKnown RBP10.72□□□□□ -0.69
CLCN5-204ENST00000376108 CWC22Q9HCG8 908 aaKnown RBP10.72□□□□□ -0.69
CLCN5-204ENST00000376108 ATP6V1AP38606 617 aa10.72□□□□□ -0.69
CLCN5-204ENST00000376108 HSCBQ8IWL3 235 aa10.72□□□□□ -0.69
CLCN5-204ENST00000376108 A0A1B0GUL7 405 aa10.71□□□□□ -0.69
CLCN5-204ENST00000376108 PRIM1P49642 420 aaKnown RBP10.71□□□□□ -0.69
CLCN5-204ENST00000376108 ATG3Q9NT62 314 aa10.71□□□□□ -0.69
CLCN5-204ENST00000376108 FAM53CQ9NYF3 392 aa10.71□□□□□ -0.69
CLCN5-204ENST00000376108 RPAINQ86UA6 219 aa10.71□□□□□ -0.69
CLCN5-204ENST00000376108 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.71□□□□□ -0.69
CLCN5-204ENST00000376108 KNSTRNQ9Y448 316 aa10.71□□□□□ -0.69
CLCN5-204ENST00000376108 CCDC144AA2RUR9 1427 aa10.71□□□□□ -0.7
CLCN5-204ENST00000376108 POLR1AO95602 1720 aaPredicted RBP10.71□□□□□ -0.7
CLCN5-204ENST00000376108 MAP9Q49MG5 647 aa10.71□□□□□ -0.7
CLCN5-204ENST00000376108 SMARCA4P51532 1647 aa10.7□□□□□ -0.7
CLCN5-204ENST00000376108 IPO8O15397 1037 aaKnown RBP10.7□□□□□ -0.7
CLCN5-204ENST00000376108 TRDNQ13061 729 aa10.7□□□□□ -0.7
CLCN5-204ENST00000376108 DHX29Q7Z478 1369 aaKnown RBP10.7□□□□□ -0.7
CLCN5-204ENST00000376108 CT47B1P0C2W7 299 aaPredicted RBP10.7□□□□□ -0.7
CLCN5-204ENST00000376108 LCMT1Q9UIC8 334 aa10.7□□□□□ -0.7
CLCN5-204ENST00000376108 TTC31Q49AM3 519 aaPredicted RBP10.69□□□□□ -0.7
CLCN5-204ENST00000376108 C17orf53Q8N3J3 647 aaPredicted RBP10.69□□□□□ -0.7
CLCN5-204ENST00000376108 CDCA7LQ96GN5 454 aa10.69□□□□□ -0.7
CLCN5-204ENST00000376108 NBPF3Q9H094 633 aa10.69□□□□□ -0.7
CLCN5-204ENST00000376108 MTA1Q13330 715 aa10.69□□□□□ -0.7
CLCN5-204ENST00000376108 E2F4Q16254 413 aa10.69□□□□□ -0.7
CLCN5-204ENST00000376108 CCDC96Q2M329 555 aa10.69□□□□□ -0.7
CLCN5-204ENST00000376108 CAVIN1Q6NZI2 390 aaKnown RBP10.69□□□□□ -0.7
CLCN5-204ENST00000376108 MROH2BQ7Z745 1585 aa10.68□□□□□ -0.7
CLCN5-204ENST00000376108 LIG1P18858 919 aa10.68□□□□□ -0.7
CLCN5-204ENST00000376108 MAP2K2P36507 400 aa10.68□□□□□ -0.7
CLCN5-204ENST00000376108 SMC5Q8IY18 1101 aa10.68□□□□□ -0.7
CLCN5-204ENST00000376108 FAM210AQ96ND0 272 aa10.68□□□□□ -0.7
CLCN5-204ENST00000376108 ST7Q9NRC1 585 aa10.68□□□□□ -0.7
CLCN5-204ENST00000376108 RTEL1-TNFRSF6BF6WH68 1400 aa10.68□□□□□ -0.7
CLCN5-204ENST00000376108 ARHGAP31Q2M1Z3 1444 aa10.68□□□□□ -0.7
CLCN5-204ENST00000376108 WIZO95785 1651 aa10.68□□□□□ -0.7
CLCN5-204ENST00000376108 KIF7Q2M1P5 1343 aa10.68□□□□□ -0.7
CLCN5-204ENST00000376108 H0YHG0 523 aa10.68□□□□□ -0.7
CLCN5-204ENST00000376108 SARNPP82979 210 aaKnown RBP10.68□□□□□ -0.7
CLCN5-204ENST00000376108 TXLNBQ8N3L3 684 aa10.68□□□□□ -0.7
CLCN5-204ENST00000376108 ANKRD20A12PQ8NF67 263 aa10.67□□□□□ -0.7
CLCN5-204ENST00000376108 RAPGEF2Q9Y4G8 1499 aa10.67□□□□□ -0.7
CLCN5-204ENST00000376108 ROCK2O75116 1388 aaKnown RBP10.67□□□□□ -0.7
CLCN5-204ENST00000376108 PACS2Q86VP3 889 aa10.67□□□□□ -0.7
CLCN5-204ENST00000376108 RPS6KL1Q9Y6S9 549 aa10.67□□□□□ -0.7
CLCN5-204ENST00000376108 KRBA2Q6ZNG9 492 aa10.66□□□□□ -0.7
CLCN5-204ENST00000376108 CLEC17AQ6ZS10 378 aa10.66□□□□□ -0.7
CLCN5-204ENST00000376108 ANKRD23Q86SG2 305 aa10.66□□□□□ -0.7
CLCN5-204ENST00000376108 SRLQ86TD4 932 aa10.66□□□□□ -0.7
CLCN5-204ENST00000376108 SUGP1Q8IWZ8 645 aaKnown RBP10.66□□□□□ -0.7
CLCN5-204ENST00000376108 KIF1BPQ96EK5 621 aa10.66□□□□□ -0.7
CLCN5-204ENST00000376108 CTTNBP2Q8WZ74 1663 aa10.66□□□□□ -0.7
CLCN5-204ENST00000376108 FAM50AQ14320 339 aaKnown RBP10.66□□□□□ -0.7
CLCN5-204ENST00000376108 MCTP2Q6DN12 878 aa10.66□□□□□ -0.7
CLCN5-204ENST00000376108 FAM184AQ8NB25 1140 aa10.66□□□□□ -0.7
CLCN5-204ENST00000376108 BAZ1AQ9NRL2 1556 aaPredicted RBP10.66□□□□□ -0.7
CLCN5-204ENST00000376108 CTAGE5O15320 804 aa10.65□□□□□ -0.7
CLCN5-204ENST00000376108 INHBEP58166 350 aa10.65□□□□□ -0.7
CLCN5-204ENST00000376108 NOM1Q5C9Z4 860 aaKnown RBP10.65□□□□□ -0.7
CLCN5-204ENST00000376108 DNAJC14Q6Y2X3 702 aaPredicted RBP10.65□□□□□ -0.7
CLCN5-204ENST00000376108 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.65□□□□□ -0.7
CLCN5-204ENST00000376108 CCDC191Q8NCU4 936 aa10.65□□□□□ -0.7
CLCN5-204ENST00000376108 NEK11Q8NG66 645 aa10.65□□□□□ -0.7
CLCN5-204ENST00000376108 TBC1D22AQ8WUA7 517 aa10.65□□□□□ -0.7
CLCN5-204ENST00000376108 CWC15Q9P013 229 aaKnown RBP10.65□□□□□ -0.7
CLCN5-204ENST00000376108 ARAP1Q96P48 1450 aa10.65□□□□□ -0.7
CLCN5-204ENST00000376108 CCDC196A0A1B0GTZ2 297 aa10.65□□□□□ -0.7
CLCN5-204ENST00000376108 RBM5P52756 815 aaKnown RBP eCLIP10.65□□□□□ -0.7
CLCN5-204ENST00000376108 ZNF397Q8NF99 534 aaPredicted RBP10.65□□□□□ -0.7
CLCN5-204ENST00000376108 PAIP2Q9BPZ3 127 aaKnown RBP10.65□□□□□ -0.7
CLCN5-204ENST00000376108 C22orf23Q9BZE7 217 aa10.65□□□□□ -0.7
CLCN5-204ENST00000376108 LRSAM1Q6UWE0 723 aa10.64□□□□□ -0.71
CLCN5-204ENST00000376108 RRP15Q9Y3B9 282 aaKnown RBP10.64□□□□□ -0.71
CLCN5-204ENST00000376108 PAXBP1Q9Y5B6 917 aa10.64□□□□□ -0.71
CLCN5-204ENST00000376108 BMS1Q14692 1282 aaKnown RBP10.64□□□□□ -0.71
CLCN5-204ENST00000376108 PIK3R5Q8WYR1 880 aa10.64□□□□□ -0.71
CLCN5-204ENST00000376108 ZMYM3Q14202 1370 aa10.64□□□□□ -0.71
CLCN5-204ENST00000376108 PLEKHG2Q9H7P9 1386 aa10.63□□□□□ -0.71
CLCN5-204ENST00000376108 IPO7O95373 1038 aaKnown RBP10.63□□□□□ -0.71
CLCN5-204ENST00000376108 TMTC2Q8N394 836 aa10.63□□□□□ -0.71
CLCN5-204ENST00000376108 TTC12Q9H892 705 aaPredicted RBP10.63□□□□□ -0.71
CLCN5-204ENST00000376108 BAG4O95429 457 aaKnown RBP10.63□□□□□ -0.71
CLCN5-204ENST00000376108 RBM6P78332 1123 aaKnown RBP10.63□□□□□ -0.71
CLCN5-204ENST00000376108 CCT2P78371 535 aaKnown RBP10.63□□□□□ -0.71
CLCN5-204ENST00000376108 ARMCX6Q7L4S7 300 aa10.63□□□□□ -0.71
CLCN5-204ENST00000376108 CEP89Q96ST8 783 aa10.63□□□□□ -0.71
CLCN5-204ENST00000376108 PDS5BQ9NTI5 1447 aa10.63□□□□□ -0.71
CLCN5-204ENST00000376108 SYNJ1O43426 1573 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms