RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 SPC24Q8NBT2 197 aa11.71□□□□□ -0.54
SPEN-201ENST00000375759 GRPEL1Q9HAV7 217 aa11.71□□□□□ -0.54
SPEN-201ENST00000375759 RBM10P98175 930 aaKnown RBP11.7□□□□□ -0.54
SPEN-201ENST00000375759 CLASRPQ8N2M8 674 aaKnown RBP11.7□□□□□ -0.54
SPEN-201ENST00000375759 UQCRHLA0A096LP55 91 aa11.7□□□□□ -0.54
SPEN-201ENST00000375759 UQCRHP07919 91 aa11.7□□□□□ -0.54
SPEN-201ENST00000375759 DEF6Q9H4E7 631 aa11.7□□□□□ -0.54
SPEN-201ENST00000375759 SYCP1Q15431 976 aa11.7□□□□□ -0.54
SPEN-201ENST00000375759 PPFIBP1Q86W92 1011 aa11.7□□□□□ -0.54
SPEN-201ENST00000375759 WDR33Q9C0J8 1336 aaKnown RBP11.7□□□□□ -0.54
SPEN-201ENST00000375759 SEPT7Q16181 437 aaKnown RBP11.7□□□□□ -0.54
SPEN-201ENST00000375759 GCC1Q96CN9 775 aa11.69□□□□□ -0.54
SPEN-201ENST00000375759 SERPINC1P01008 464 aa11.69□□□□□ -0.54
SPEN-201ENST00000375759 FIBPO43427 364 aa11.69□□□□□ -0.54
SPEN-201ENST00000375759 STIM1Q13586 685 aa11.69□□□□□ -0.54
SPEN-201ENST00000375759 CDK5RAP3Q96JB5 506 aa11.69□□□□□ -0.54
SPEN-201ENST00000375759 TNMDQ9H2S6 317 aa11.69□□□□□ -0.54
SPEN-201ENST00000375759 CBFA2T2O43439 604 aa11.69□□□□□ -0.54
SPEN-201ENST00000375759 GNAI3P08754 354 aa11.69□□□□□ -0.54
SPEN-201ENST00000375759 FSD1Q9BTV5 496 aa11.69□□□□□ -0.54
SPEN-201ENST00000375759 PDIA4P13667 645 aaKnown RBP11.69□□□□□ -0.54
SPEN-201ENST00000375759 PDCL2Q8N4E4 241 aa11.69□□□□□ -0.54
SPEN-201ENST00000375759 PLCD4Q9BRC7 762 aa11.69□□□□□ -0.54
SPEN-201ENST00000375759 CCAR1Q8IX12 1150 aaKnown RBP11.68□□□□□ -0.54
SPEN-201ENST00000375759 FMNL2Q96PY5 1086 aa11.68□□□□□ -0.54
SPEN-201ENST00000375759 MINK1Q8N4C8 1332 aaPredicted RBP11.68□□□□□ -0.54
SPEN-201ENST00000375759 RIC3Q7Z5B4 369 aa11.68□□□□□ -0.54
SPEN-201ENST00000375759 NEUROD6Q96NK8 337 aa11.68□□□□□ -0.54
SPEN-201ENST00000375759 ERC1Q8IUD2 1116 aa11.68□□□□□ -0.54
SPEN-201ENST00000375759 NEFHP12036 1026 aa11.68□□□□□ -0.54
SPEN-201ENST00000375759 PDE3AQ14432 1141 aa11.68□□□□□ -0.54
SPEN-201ENST00000375759 CCDC181Q5TID7 509 aa11.68□□□□□ -0.54
SPEN-201ENST00000375759 STK38Q15208 465 aa11.68□□□□□ -0.54
SPEN-201ENST00000375759 SLC3A2P08195 630 aaKnown RBP11.67□□□□□ -0.54
SPEN-201ENST00000375759 MYOM3Q5VTT5 1437 aa11.67□□□□□ -0.54
SPEN-201ENST00000375759 TBC1D2BQ9UPU7 963 aa11.67□□□□□ -0.54
SPEN-201ENST00000375759 BRPF1P55201 1214 aaPredicted RBP11.67□□□□□ -0.54
SPEN-201ENST00000375759 SKIDA1Q1XH10 827 aa11.67□□□□□ -0.54
SPEN-201ENST00000375759 KRT85P78386 507 aa11.67□□□□□ -0.54
SPEN-201ENST00000375759 TDRD9Q8NDG6 1382 aaKnown RBP11.67□□□□□ -0.54
SPEN-201ENST00000375759 ENOX2Q16206 610 aaKnown RBP11.66□□□□□ -0.54
SPEN-201ENST00000375759 K7ELQ4 463 aaPredicted RBP11.66□□□□□ -0.54
SPEN-201ENST00000375759 CIZ1Q9ULV3 898 aaPredicted RBP11.66□□□□□ -0.54
SPEN-201ENST00000375759 KRI1Q8N9T8 703 aaKnown RBP11.66□□□□□ -0.54
SPEN-201ENST00000375759 SCAPERQ9BY12 1400 aa11.66□□□□□ -0.54
SPEN-201ENST00000375759 ESPNB1AK53 854 aa11.65□□□□□ -0.54
SPEN-201ENST00000375759 LRRCC1Q9C099 1032 aa11.65□□□□□ -0.54
SPEN-201ENST00000375759 CCDC30Q5VVM6 783 aa11.65□□□□□ -0.54
SPEN-201ENST00000375759 RBM33Q96EV2 1170 aaKnown RBP11.65□□□□□ -0.54
SPEN-201ENST00000375759 IL27Q8NEV9 243 aa11.65□□□□□ -0.54
SPEN-201ENST00000375759 CFAP45Q9UL16 551 aa11.65□□□□□ -0.54
SPEN-201ENST00000375759 KIF2AO00139 706 aaPredicted RBP11.65□□□□□ -0.54
SPEN-201ENST00000375759 CYP46A1Q9Y6A2 500 aa11.65□□□□□ -0.54
SPEN-201ENST00000375759 EZRP15311 586 aaKnown RBP11.65□□□□□ -0.55
SPEN-201ENST00000375759 ME1P48163 572 aa11.64□□□□□ -0.55
SPEN-201ENST00000375759 BACH2Q9BYV9 841 aa11.64□□□□□ -0.55
SPEN-201ENST00000375759 PSME1Q06323 249 aa11.64□□□□□ -0.55
SPEN-201ENST00000375759 DYDC1Q8WWB3 177 aa11.64□□□□□ -0.55
SPEN-201ENST00000375759 GNAI2P04899 355 aa11.64□□□□□ -0.55
SPEN-201ENST00000375759 RRBP1Q9P2E9 1410 aaKnown RBP11.63□□□□□ -0.55
SPEN-201ENST00000375759 SURF6O75683 361 aaKnown RBP11.63□□□□□ -0.55
SPEN-201ENST00000375759 GBP2P32456 591 aaPredicted RBP11.63□□□□□ -0.55
SPEN-201ENST00000375759 PDZRN3Q9UPQ7 1066 aa11.63□□□□□ -0.55
SPEN-201ENST00000375759 HMOX1P09601 288 aa11.63□□□□□ -0.55
SPEN-201ENST00000375759 CENPHQ9H3R5 247 aa11.63□□□□□ -0.55
SPEN-201ENST00000375759 TRIM22Q8IYM9 498 aa11.63□□□□□ -0.55
SPEN-201ENST00000375759 SRCIN1Q9C0H9 1055 aa11.62□□□□□ -0.55
SPEN-201ENST00000375759 WASHC2AQ641Q2 1341 aa11.62□□□□□ -0.55
SPEN-201ENST00000375759 CEBPZQ03701 1054 aaKnown RBP11.62□□□□□ -0.55
SPEN-201ENST00000375759 KRT18P05783 430 aaKnown RBP11.62□□□□□ -0.55
SPEN-201ENST00000375759 FYB1O15117 783 aa11.62□□□□□ -0.55
SPEN-201ENST00000375759 CEP57L1Q8IYX8 460 aa11.62□□□□□ -0.55
SPEN-201ENST00000375759 GBP3Q9H0R5 595 aa11.62□□□□□ -0.55
SPEN-201ENST00000375759 WWC2Q6AWC2 1192 aa11.61□□□□□ -0.55
SPEN-201ENST00000375759 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.61□□□□□ -0.552e-6■■■□□ 14.9
SPEN-201ENST00000375759 ZSCAN30Q86W11 494 aa11.61□□□□□ -0.55
SPEN-201ENST00000375759 PODXL2Q9NZ53 605 aa11.61□□□□□ -0.55
SPEN-201ENST00000375759 ADAMTS8Q9UP79 889 aa11.61□□□□□ -0.55
SPEN-201ENST00000375759 SMTNL1A8MU46 457 aa11.61□□□□□ -0.55
SPEN-201ENST00000375759 FGD6Q6ZV73 1430 aa11.61□□□□□ -0.55
SPEN-201ENST00000375759 CDKL5O76039 1030 aa11.61□□□□□ -0.55
SPEN-201ENST00000375759 MCM3P25205 808 aa11.6□□□□□ -0.55
SPEN-201ENST00000375759 RAPGEF4Q8WZA2 1011 aa11.6□□□□□ -0.55
SPEN-201ENST00000375759 UBXN4Q92575 508 aa11.6□□□□□ -0.55
SPEN-201ENST00000375759 FYCO1Q9BQS8 1478 aa11.6□□□□□ -0.55
SPEN-201ENST00000375759 AIMP1Q12904 312 aaKnown RBP11.6□□□□□ -0.55
SPEN-201ENST00000375759 SYTL4Q96C24 671 aaPredicted RBP11.6□□□□□ -0.55
SPEN-201ENST00000375759 MAP9Q49MG5 647 aa11.6□□□□□ -0.55
SPEN-201ENST00000375759 LARP1BQ659C4 914 aaKnown RBP11.6□□□□□ -0.55
SPEN-201ENST00000375759 ANKRD62A6NC57 917 aa11.6□□□□□ -0.55
SPEN-201ENST00000375759 CCDC102AQ96A19 550 aa11.6□□□□□ -0.55
SPEN-201ENST00000375759 MCM4P33991 863 aa11.6□□□□□ -0.55
SPEN-201ENST00000375759 ATP2B1P20020 1258 aa11.6□□□□□ -0.55
SPEN-201ENST00000375759 CCT4P50991 539 aaKnown RBP11.6□□□□□ -0.55
SPEN-201ENST00000375759 IKQ13123 557 aaPredicted RBP11.6□□□□□ -0.55
SPEN-201ENST00000375759 NUP62CLQ9H1M0 184 aa11.6□□□□□ -0.55
SPEN-201ENST00000375759 FAM177A1Q8N128 213 aaPredicted RBP11.59□□□□□ -0.55
SPEN-201ENST00000375759 GAS2L2Q8NHY3 880 aa11.59□□□□□ -0.55
SPEN-201ENST00000375759 SPATA32Q96LK8 384 aa11.59□□□□□ -0.55
SPEN-201ENST00000375759 LRRFIP2Q9Y608 721 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms