RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 VIRMAQ69YN4 1812 aaKnown RBP18.54■□□□□ 0.56
MSH5-201ENST00000375703 ZMYM3Q14202 1370 aa18.53■□□□□ 0.56
MSH5-201ENST00000375703 ADGRB2O60241 1585 aa18.53■□□□□ 0.56
MSH5-201ENST00000375703 DIP2CQ9Y2E4 1556 aa18.53■□□□□ 0.56
MSH5-201ENST00000375703 RIPK4P57078 832 aa18.51■□□□□ 0.55
MSH5-201ENST00000375703 SSH1Q8WYL5 1049 aa18.51■□□□□ 0.55
MSH5-201ENST00000375703 DIAPH1O60610 1272 aaKnown RBP18.51■□□□□ 0.55
MSH5-201ENST00000375703 TRIM27P14373 513 aa18.51■□□□□ 0.55
MSH5-201ENST00000375703 HDGFL2Q7Z4V5 671 aaPredicted RBP18.51■□□□□ 0.55
MSH5-201ENST00000375703 TBC1D32Q96NH3 1257 aa18.5■□□□□ 0.55
MSH5-201ENST00000375703 PNNQ9H307 717 aaKnown RBP18.5■□□□□ 0.55
MSH5-201ENST00000375703 IL16Q14005 1332 aa18.5■□□□□ 0.55
MSH5-201ENST00000375703 NLRP1Q9C000 1473 aa18.49■□□□□ 0.55
MSH5-201ENST00000375703 ATF7IPQ6VMQ6 1270 aa18.49■□□□□ 0.55
MSH5-201ENST00000375703 DDX19BQ9UMR2 479 aa18.49■□□□□ 0.55
MSH5-201ENST00000375703 PTPRMP28827 1452 aa18.49■□□□□ 0.55
MSH5-201ENST00000375703 ITPRIPQ8IWB1 547 aa18.49■□□□□ 0.55
MSH5-201ENST00000375703 CDK19Q9BWU1 502 aa18.49■□□□□ 0.55
MSH5-201ENST00000375703 NOB1Q9ULX3 412 aaKnown RBP18.49■□□□□ 0.55
MSH5-201ENST00000375703 COL3A1P02461 1466 aaPredicted RBP18.48■□□□□ 0.55
MSH5-201ENST00000375703 YTHDC2Q9H6S0 1430 aaKnown RBP18.48■□□□□ 0.55
MSH5-201ENST00000375703 YEATS2Q9ULM3 1422 aa18.47■□□□□ 0.55
MSH5-201ENST00000375703 CABP1Q9NZU7 370 aa18.47■□□□□ 0.55
MSH5-201ENST00000375703 HDAC1Q13547 482 aaPredicted RBP18.47■□□□□ 0.55
MSH5-201ENST00000375703 SLKQ9H2G2 1235 aaPredicted RBP18.47■□□□□ 0.55
MSH5-201ENST00000375703 MED14O60244 1454 aa18.46■□□□□ 0.55
MSH5-201ENST00000375703 CD163L1Q9NR16 1453 aa18.46■□□□□ 0.55
MSH5-201ENST00000375703 FBXO31Q5XUX0 539 aaPredicted RBP18.46■□□□□ 0.55
MSH5-201ENST00000375703 RTN4Q9NQC3 1192 aaKnown RBP18.45■□□□□ 0.54
MSH5-201ENST00000375703 STAG3Q9UJ98 1225 aa18.45■□□□□ 0.54
MSH5-201ENST00000375703 IPO8O15397 1037 aaKnown RBP18.44■□□□□ 0.54
MSH5-201ENST00000375703 TMEM131LA2VDJ0 1609 aa18.44■□□□□ 0.54
MSH5-201ENST00000375703 PNPLA6Q8IY17 1366 aa18.44■□□□□ 0.54
MSH5-201ENST00000375703 FCHSD2O94868 740 aa18.44■□□□□ 0.54
MSH5-201ENST00000375703 TMEM57Q8N5G2 664 aa18.44■□□□□ 0.54
MSH5-201ENST00000375703 BRPF3Q9ULD4 1205 aa18.44■□□□□ 0.54
MSH5-201ENST00000375703 TBC1D2Q9BYX2 928 aa18.43■□□□□ 0.54
MSH5-201ENST00000375703 MYO5BQ9ULV0 1848 aa18.42■□□□□ 0.54
MSH5-201ENST00000375703 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.42■□□□□ 0.54
MSH5-201ENST00000375703 ANTXR1Q9H6X2 564 aa18.42■□□□□ 0.54
MSH5-201ENST00000375703 ZBTB40Q9NUA8 1239 aa18.42■□□□□ 0.54
MSH5-201ENST00000375703 KIF16BQ96L93 1317 aa18.41■□□□□ 0.54
MSH5-201ENST00000375703 RICTORQ6R327 1708 aa18.41■□□□□ 0.54
MSH5-201ENST00000375703 ALDH1L2Q3SY69 923 aa18.41■□□□□ 0.54
MSH5-201ENST00000375703 SMC5Q8IY18 1101 aa18.41■□□□□ 0.54
MSH5-201ENST00000375703 PREX1Q8TCU6 1659 aa18.41■□□□□ 0.54
MSH5-201ENST00000375703 FBLN1P23142 703 aa18.4■□□□□ 0.54
MSH5-201ENST00000375703 C22orf23Q9BZE7 217 aa18.4■□□□□ 0.54
MSH5-201ENST00000375703 PRKAR2BP31323 418 aa18.39■□□□□ 0.53
MSH5-201ENST00000375703 POLKQ9UBT6 870 aa18.39■□□□□ 0.53
MSH5-201ENST00000375703 ARHGEF40Q8TER5 1519 aa18.39■□□□□ 0.53
MSH5-201ENST00000375703 ALKQ9UM73 1620 aa18.39■□□□□ 0.53
MSH5-201ENST00000375703 MFAP1P55081 439 aaKnown RBP18.39■□□□□ 0.53
MSH5-201ENST00000375703 CLTCQ00610 1675 aaKnown RBP18.38■□□□□ 0.53
MSH5-201ENST00000375703 ANKRD26Q9UPS8 1709 aa18.38■□□□□ 0.53
MSH5-201ENST00000375703 RSPH6AQ9H0K4 717 aa18.38■□□□□ 0.53
MSH5-201ENST00000375703 WAPLQ7Z5K2 1190 aa18.38■□□□□ 0.53
MSH5-201ENST00000375703 ZNF428Q96B54 188 aa18.36■□□□□ 0.53
MSH5-201ENST00000375703 SPRYD3Q8NCJ5 442 aa18.35■□□□□ 0.53
MSH5-201ENST00000375703 HMOX1P09601 288 aa18.35■□□□□ 0.53
MSH5-201ENST00000375703 PHACTR3Q96KR7 559 aa18.35■□□□□ 0.53
MSH5-201ENST00000375703 NUCB1Q02818 461 aa18.34■□□□□ 0.53
MSH5-201ENST00000375703 NFE2L2Q16236 605 aa18.34■□□□□ 0.53
MSH5-201ENST00000375703 BRPF1P55201 1214 aaPredicted RBP18.34■□□□□ 0.53
MSH5-201ENST00000375703 FAM135BQ49AJ0 1406 aa18.33■□□□□ 0.52
MSH5-201ENST00000375703 CALD1Q05682 793 aaKnown RBP18.32■□□□□ 0.52
MSH5-201ENST00000375703 VAMP4O75379 141 aa18.32■□□□□ 0.52
MSH5-201ENST00000375703 LNPKQ9C0E8 428 aa18.32■□□□□ 0.52
MSH5-201ENST00000375703 THUMPD2Q9BTF0 503 aaKnown RBP18.31■□□□□ 0.52
MSH5-201ENST00000375703 LRRC7Q96NW7 1537 aa18.31■□□□□ 0.52
MSH5-201ENST00000375703 CHD1LQ86WJ1 897 aa18.31■□□□□ 0.52
MSH5-201ENST00000375703 EMILIN1Q9Y6C2 1016 aa18.31■□□□□ 0.52
MSH5-201ENST00000375703 KIF20BQ96Q89 1820 aa18.3■□□□□ 0.52
MSH5-201ENST00000375703 CDC42BPGQ6DT37 1551 aa18.3■□□□□ 0.52
MSH5-201ENST00000375703 ZBTB7BO15156 539 aaPredicted RBP18.3■□□□□ 0.52
MSH5-201ENST00000375703 GNAI1P63096 354 aa18.3■□□□□ 0.52
MSH5-201ENST00000375703 MRPL50Q8N5N7 158 aaKnown RBP18.3■□□□□ 0.52
MSH5-201ENST00000375703 CHMP4BQ9H444 224 aaKnown RBP18.3■□□□□ 0.52
MSH5-201ENST00000375703 ARHGAP45Q92619 1136 aa18.29■□□□□ 0.52
MSH5-201ENST00000375703 PPP6R1Q9UPN7 881 aa18.29■□□□□ 0.52
MSH5-201ENST00000375703 ATP7BP35670 1465 aa18.29■□□□□ 0.52
MSH5-201ENST00000375703 IL13P35225 146 aa18.29■□□□□ 0.52
MSH5-201ENST00000375703 PPIP5K1Q6PFW1 1433 aa18.29■□□□□ 0.52
MSH5-201ENST00000375703 TSPYL6Q8N831 410 aa18.29■□□□□ 0.52
MSH5-201ENST00000375703 ELL2O00472 640 aaPredicted RBP18.28■□□□□ 0.52
MSH5-201ENST00000375703 IFT57Q9NWB7 429 aa18.28■□□□□ 0.52
MSH5-201ENST00000375703 WASLO00401 505 aaPredicted RBP18.28■□□□□ 0.52
MSH5-201ENST00000375703 NME9Q86XW9 330 aa18.28■□□□□ 0.52
MSH5-201ENST00000375703 CHMP5Q9NZZ3 219 aa18.28■□□□□ 0.52
MSH5-201ENST00000375703 DLC1Q96QB1 1528 aa18.27■□□□□ 0.52
MSH5-201ENST00000375703 ANKRD45Q5TZF3 282 aa18.27■□□□□ 0.52
MSH5-201ENST00000375703 CYB5RLQ6IPT4 315 aa18.27■□□□□ 0.52
MSH5-201ENST00000375703 RIMS2Q9UQ26 1411 aa18.27■□□□□ 0.52
MSH5-201ENST00000375703 FAM69CQ0P6D2 419 aa18.27■□□□□ 0.51
MSH5-201ENST00000375703 HSCBQ8IWL3 235 aa18.27■□□□□ 0.51
MSH5-201ENST00000375703 A2ML1A8K2U0 1454 aa18.26■□□□□ 0.51
MSH5-201ENST00000375703 GCC1Q96CN9 775 aa18.26■□□□□ 0.51
MSH5-201ENST00000375703 MBIPQ9NS73 344 aa18.26■□□□□ 0.51
MSH5-201ENST00000375703 ZRANB1Q9UGI0 708 aa18.26■□□□□ 0.51
MSH5-201ENST00000375703 ZNF853P0CG23 659 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms