RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 PLEKHG3A1L390 1219 aa10.56□□□□□ -0.72
PMS1-202ENST00000374826 BMP1P13497 986 aa10.56□□□□□ -0.72
PMS1-202ENST00000374826 TRIM66O15016 1216 aa10.55□□□□□ -0.72
PMS1-202ENST00000374826 SPTLC1O15269 473 aa10.55□□□□□ -0.72
PMS1-202ENST00000374826 PARP9Q8IXQ6 854 aa10.55□□□□□ -0.72
PMS1-202ENST00000374826 STK17AQ9UEE5 414 aa10.55□□□□□ -0.72
PMS1-202ENST00000374826 NXF1Q9UBU9 619 aaKnown RBP10.54□□□□□ -0.72
PMS1-202ENST00000374826 CFAP99D6REC4 459 aa10.53□□□□□ -0.72
PMS1-202ENST00000374826 HRCP23327 699 aa10.53□□□□□ -0.72
PMS1-202ENST00000374826 CTHP32929 405 aa10.53□□□□□ -0.72
PMS1-202ENST00000374826 SLC16A10Q8TF71 515 aa10.53□□□□□ -0.72
PMS1-202ENST00000374826 TLL2Q9Y6L7 1015 aa10.53□□□□□ -0.72
PMS1-202ENST00000374826 RIC3Q7Z5B4 369 aa10.52□□□□□ -0.73
PMS1-202ENST00000374826 AK7Q96M32 723 aa10.52□□□□□ -0.73
PMS1-202ENST00000374826 ZFP42Q96MM3 310 aa10.51□□□□□ -0.73
PMS1-202ENST00000374826 ZBTB3Q9H5J0 574 aa10.51□□□□□ -0.73
PMS1-202ENST00000374826 NNTQ13423 1086 aa10.5□□□□□ -0.73
PMS1-202ENST00000374826 PRPF38BQ5VTL8 546 aaKnown RBP10.5□□□□□ -0.73
PMS1-202ENST00000374826 NPAS3Q8IXF0 933 aa10.49□□□□□ -0.73
PMS1-202ENST00000374826 FAM174AQ8TBP5 190 aa10.49□□□□□ -0.73
PMS1-202ENST00000374826 F12P00748 615 aaPredicted RBP10.48□□□□□ -0.73
PMS1-202ENST00000374826 KLF16Q9BXK1 252 aaPredicted RBP10.48□□□□□ -0.73
PMS1-202ENST00000374826 CABLES1Q8TDN4 633 aa10.47□□□□□ -0.73
PMS1-202ENST00000374826 FOXJ1Q92949 421 aa10.47□□□□□ -0.73
PMS1-202ENST00000374826 CDK15Q96Q40 435 aa10.47□□□□□ -0.73
PMS1-202ENST00000374826 MAP10Q9P2G4 905 aa10.47□□□□□ -0.73
PMS1-202ENST00000374826 TIMP2P16035 220 aa10.46□□□□□ -0.73
PMS1-202ENST00000374826 WDR4P57081 412 aaKnown RBP10.46□□□□□ -0.73
PMS1-202ENST00000374826 ADH1CP00326 375 aa10.45□□□□□ -0.74
PMS1-202ENST00000374826 CSPP1Q1MSJ5 1256 aa10.45□□□□□ -0.74
PMS1-202ENST00000374826 MRPL14Q6P1L8 145 aaKnown RBP10.45□□□□□ -0.74
PMS1-202ENST00000374826 IRF7Q92985 503 aa10.45□□□□□ -0.74
PMS1-202ENST00000374826 PER1O15534 1290 aaPredicted RBP10.44□□□□□ -0.74
PMS1-202ENST00000374826 GMPRP36959 345 aa10.44□□□□□ -0.74
PMS1-202ENST00000374826 SCARF1Q14162 830 aa10.44□□□□□ -0.74
PMS1-202ENST00000374826 H3BM21 787 aa10.43□□□□□ -0.74
PMS1-202ENST00000374826 VEGFBP49765 207 aa10.43□□□□□ -0.74
PMS1-202ENST00000374826 ARID5BQ14865 1188 aa10.43□□□□□ -0.74
PMS1-202ENST00000374826 TUSC1Q2TAM9 212 aa10.42□□□□□ -0.74
PMS1-202ENST00000374826 C4orf48Q5BLP8 95 aa10.42□□□□□ -0.74
PMS1-202ENST00000374826 MYSM1Q5VVJ2 828 aa10.42□□□□□ -0.74
PMS1-202ENST00000374826 PURBQ96QR8 312 aaKnown RBP10.42□□□□□ -0.74
PMS1-202ENST00000374826 LIMD1Q9UGP4 676 aa10.42□□□□□ -0.74
PMS1-202ENST00000374826 NUTM2BA6NNL0 878 aaPredicted RBP10.41□□□□□ -0.74
PMS1-202ENST00000374826 NUTM2EB1AL46 878 aaPredicted RBP10.41□□□□□ -0.74
PMS1-202ENST00000374826 GRM5P41594 1212 aa10.41□□□□□ -0.74
PMS1-202ENST00000374826 PDE4DQ08499 809 aa10.41□□□□□ -0.74
PMS1-202ENST00000374826 NR5A1Q13285 461 aa10.41□□□□□ -0.74
PMS1-202ENST00000374826 AGERQ15109 404 aa10.41□□□□□ -0.74
PMS1-202ENST00000374826 QPCTQ16769 361 aa10.41□□□□□ -0.74
PMS1-202ENST00000374826 NUTM2DQ5VT03 806 aaPredicted RBP10.41□□□□□ -0.74
PMS1-202ENST00000374826 BPHLQ86WA6 291 aaPredicted RBP10.41□□□□□ -0.74
PMS1-202ENST00000374826 NUTM2AQ8IVF1 878 aaPredicted RBP10.41□□□□□ -0.74
PMS1-202ENST00000374826 LILRB3O75022 631 aa10.4□□□□□ -0.74
PMS1-202ENST00000374826 TSC1Q92574 1164 aa10.39□□□□□ -0.75
PMS1-202ENST00000374826 ERBB4Q15303 1308 aa10.38□□□□□ -0.75
PMS1-202ENST00000374826 ZIC2O95409 532 aaPredicted RBP10.38□□□□□ -0.75
PMS1-202ENST00000374826 NR3C2P08235 984 aa10.38□□□□□ -0.75
PMS1-202ENST00000374826 LORP23490 312 aaPredicted RBP10.38□□□□□ -0.75
PMS1-202ENST00000374826 ARMC2Q8NEN0 867 aa10.38□□□□□ -0.75
PMS1-202ENST00000374826 ITPKCQ96DU7 683 aa10.38□□□□□ -0.75
PMS1-202ENST00000374826 ZFAND3Q9H8U3 227 aa10.38□□□□□ -0.75
PMS1-202ENST00000374826 BCANQ96GW7 911 aa10.37□□□□□ -0.75
PMS1-202ENST00000374826 FAM181BA6NEQ2 426 aa10.36□□□□□ -0.75
PMS1-202ENST00000374826 SOBPA7XYQ1 873 aa10.36□□□□□ -0.75
PMS1-202ENST00000374826 RTL5Q5HYW3 569 aaPredicted RBP10.36□□□□□ -0.75
PMS1-202ENST00000374826 ZSCAN1Q8NBB4 408 aa10.36□□□□□ -0.75
PMS1-202ENST00000374826 SH3RF1Q7Z6J0 888 aa10.34□□□□□ -0.75
PMS1-202ENST00000374826 SLC24A3Q9HC58 644 aa10.34□□□□□ -0.75
PMS1-202ENST00000374826 HELBQ8NG08 1087 aaPredicted RBP10.33□□□□□ -0.76
PMS1-202ENST00000374826 C1QTNF2Q9BXJ5 285 aa10.33□□□□□ -0.76
PMS1-202ENST00000374826 C6orf118Q5T5N4 469 aa10.32□□□□□ -0.76
PMS1-202ENST00000374826 MAN1A2O60476 641 aa10.31□□□□□ -0.76
PMS1-202ENST00000374826 NBPF14Q5TI25 921 aa10.31□□□□□ -0.76
PMS1-202ENST00000374826 SH3BP5LQ7L8J4 393 aa10.31□□□□□ -0.76
PMS1-202ENST00000374826 RSPH6AQ9H0K4 717 aa10.31□□□□□ -0.76
PMS1-202ENST00000374826 NISCHQ9Y2I1 1504 aa10.31□□□□□ -0.76
PMS1-202ENST00000374826 CLK2P49760 499 aaKnown RBP10.3□□□□□ -0.76
PMS1-202ENST00000374826 TRMT44Q8IYL2 757 aaKnown RBP10.3□□□□□ -0.76
PMS1-202ENST00000374826 POLR3EQ9NVU0 708 aa10.3□□□□□ -0.76
PMS1-202ENST00000374826 MAP4K5Q9Y4K4 846 aa10.3□□□□□ -0.76
PMS1-202ENST00000374826 UPP2O95045 317 aa10.29□□□□□ -0.76
PMS1-202ENST00000374826 VSIG8P0DPA2 414 aa10.29□□□□□ -0.76
PMS1-202ENST00000374826 BMP2P12643 396 aa10.29□□□□□ -0.76
PMS1-202ENST00000374826 VASH1Q7L8A9 365 aaPredicted RBP10.29□□□□□ -0.76
PMS1-202ENST00000374826 LINC00528Q8N1L1 170 aa10.28□□□□□ -0.76
PMS1-202ENST00000374826 MEIOBQ8N635 442 aa10.28□□□□□ -0.76
PMS1-202ENST00000374826 MAGEB6P1A0A0J9YX57 407 aa10.27□□□□□ -0.77
PMS1-202ENST00000374826 FSHRP23945 695 aa10.27□□□□□ -0.77
PMS1-202ENST00000374826 CTDSPL2Q05D32 466 aa10.27□□□□□ -0.77
PMS1-202ENST00000374826 GPKOWQ92917 476 aaPredicted RBP eCLIP10.27□□□□□ -0.77
PMS1-202ENST00000374826 EMILIN1Q9Y6C2 1016 aa10.26□□□□□ -0.77
PMS1-202ENST00000374826 SOS2Q07890 1332 aaPredicted RBP10.26□□□□□ -0.77
PMS1-202ENST00000374826 PPFIA3O75145 1194 aa10.25□□□□□ -0.77
PMS1-202ENST00000374826 TSEN34Q9BSV6 310 aaKnown RBP10.25□□□□□ -0.77
PMS1-202ENST00000374826 CCDC116Q8IYX3 515 aa10.24□□□□□ -0.77
PMS1-202ENST00000374826 ERFEQ4G0M1 354 aa10.23□□□□□ -0.77
PMS1-202ENST00000374826 CARD14Q9BXL6 1004 aa10.23□□□□□ -0.77
PMS1-202ENST00000374826 DNMT3LQ9UJW3 386 aa10.23□□□□□ -0.77
PMS1-202ENST00000374826 PDXDC2PQ6P474 469 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms