RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 PPIP5K1Q6PFW1 1433 aa23.68■■□□□ 1.38
RXRB-202ENST00000374685 TMEM2Q9UHN6 1383 aa23.67■■□□□ 1.38
RXRB-202ENST00000374685 USP32Q8NFA0 1604 aa23.67■■□□□ 1.38
RXRB-202ENST00000374685 RRS1Q15050 365 aaKnown RBP23.66■■□□□ 1.38
RXRB-202ENST00000374685 NGEFQ8N5V2 710 aa23.65■■□□□ 1.38
RXRB-202ENST00000374685 RGS3P49796 1198 aa23.65■■□□□ 1.38
RXRB-202ENST00000374685 POLKQ9UBT6 870 aa23.65■■□□□ 1.38
RXRB-202ENST00000374685 LAS1LQ9Y4W2 734 aaKnown RBP23.65■■□□□ 1.38
RXRB-202ENST00000374685 TMPOP42166 694 aaKnown RBP23.64■■□□□ 1.38
RXRB-202ENST00000374685 RIPK4P57078 832 aa23.64■■□□□ 1.38
RXRB-202ENST00000374685 CCDC61Q9Y6R9 512 aa23.63■■□□□ 1.37
RXRB-202ENST00000374685 ROBO2Q9HCK4 1378 aa23.63■■□□□ 1.37
RXRB-202ENST00000374685 NLRP1Q9C000 1473 aa23.62■■□□□ 1.37
RXRB-202ENST00000374685 RARSP54136 660 aaKnown RBP23.62■■□□□ 1.37
RXRB-202ENST00000374685 TCERG1O14776 1098 aaKnown RBP23.61■■□□□ 1.37
RXRB-202ENST00000374685 PRKAR2BP31323 418 aa23.61■■□□□ 1.37
RXRB-202ENST00000374685 WDR63Q8IWG1 891 aa23.61■■□□□ 1.37
RXRB-202ENST00000374685 EID1Q9Y6B2 187 aa23.61■■□□□ 1.37
RXRB-202ENST00000374685 NRXN3Q9Y4C0 1643 aa23.61■■□□□ 1.37
RXRB-202ENST00000374685 PDE4AP27815 886 aa23.61■■□□□ 1.37
RXRB-202ENST00000374685 IQSEC2Q5JU85 1478 aa23.61■■□□□ 1.37
RXRB-202ENST00000374685 PLEKHF1Q96S99 279 aa23.6■■□□□ 1.37
RXRB-202ENST00000374685 PRR36Q9H6K5 1346 aa23.6■■□□□ 1.37
RXRB-202ENST00000374685 MYH16Q9H6N6 1097 aa23.6■■□□□ 1.37
RXRB-202ENST00000374685 ANP32AP39687 249 aaKnown RBP23.6■■□□□ 1.37
RXRB-202ENST00000374685 COG3Q96JB2 828 aa23.59■■□□□ 1.37
RXRB-202ENST00000374685 NOP58Q9Y2X3 529 aaKnown RBP23.59■■□□□ 1.37
RXRB-202ENST00000374685 EXOSC9Q06265 439 aaKnown RBP23.58■■□□□ 1.37
RXRB-202ENST00000374685 PMFBP1Q8TBY8 1022 aa23.58■■□□□ 1.37
RXRB-202ENST00000374685 THUMPD2Q9BTF0 503 aaKnown RBP23.58■■□□□ 1.37
RXRB-202ENST00000374685 PHF23Q9BUL5 403 aaPredicted RBP23.58■■□□□ 1.37
RXRB-202ENST00000374685 TRIM35Q9UPQ4 493 aa23.58■■□□□ 1.37
RXRB-202ENST00000374685 RLBP1P12271 317 aa23.57■■□□□ 1.36
RXRB-202ENST00000374685 SETD1AO15047 1707 aaKnown RBP23.56■■□□□ 1.36
RXRB-202ENST00000374685 NEFMP07197 916 aa23.56■■□□□ 1.36
RXRB-202ENST00000374685 UBE2Q2Q8WVN8 375 aa23.56■■□□□ 1.36
RXRB-202ENST00000374685 CENPQQ7L2Z9 268 aaPredicted RBP23.55■■□□□ 1.36
RXRB-202ENST00000374685 DLC1Q96QB1 1528 aa23.55■■□□□ 1.36
RXRB-202ENST00000374685 PHACTR3Q96KR7 559 aa23.55■■□□□ 1.36
RXRB-202ENST00000374685 AMOTL2Q9Y2J4 779 aa23.55■■□□□ 1.36
RXRB-202ENST00000374685 CCDC27Q2M243 656 aa23.55■■□□□ 1.36
RXRB-202ENST00000374685 KDM2BQ8NHM5 1336 aa23.54■■□□□ 1.36
RXRB-202ENST00000374685 IGHDP01880 384 aa23.53■■□□□ 1.36
RXRB-202ENST00000374685 RBM33Q96EV2 1170 aaKnown RBP23.53■■□□□ 1.36
RXRB-202ENST00000374685 SMC4Q9NTJ3 1288 aa23.53■■□□□ 1.36
RXRB-202ENST00000374685 ADAMTS13Q76LX8 1427 aa23.53■■□□□ 1.36
RXRB-202ENST00000374685 COL3A1P02461 1466 aaPredicted RBP23.53■■□□□ 1.36
RXRB-202ENST00000374685 PAK3O75914 559 aaPredicted RBP23.52■■□□□ 1.36
RXRB-202ENST00000374685 ATP7BP35670 1465 aa23.52■■□□□ 1.36
RXRB-202ENST00000374685 ACEP12821 1306 aa23.52■■□□□ 1.36
RXRB-202ENST00000374685 UBR1Q8IWV7 1749 aa23.51■■□□□ 1.35
RXRB-202ENST00000374685 ELL2O00472 640 aaPredicted RBP23.5■■□□□ 1.35
RXRB-202ENST00000374685 BACH2Q9BYV9 841 aa23.5■■□□□ 1.35
RXRB-202ENST00000374685 EDC4Q6P2E9 1401 aaKnown RBP23.5■■□□□ 1.35
RXRB-202ENST00000374685 PDE3AQ14432 1141 aa23.5■■□□□ 1.35
RXRB-202ENST00000374685 FTSJ3Q8IY81 847 aaKnown RBP23.5■■□□□ 1.35
RXRB-202ENST00000374685 CPS1P31327 1500 aa23.49■■□□□ 1.35
RXRB-202ENST00000374685 RSPH6AQ9H0K4 717 aa23.49■■□□□ 1.35
RXRB-202ENST00000374685 NBR1Q14596 966 aa23.49■■□□□ 1.35
RXRB-202ENST00000374685 CPSF1Q10570 1443 aaKnown RBP23.49■■□□□ 1.35
RXRB-202ENST00000374685 FCHSD2O94868 740 aa23.48■■□□□ 1.35
RXRB-202ENST00000374685 KIF20BQ96Q89 1820 aa23.48■■□□□ 1.35
RXRB-202ENST00000374685 MED14O60244 1454 aa23.47■■□□□ 1.35
RXRB-202ENST00000374685 FAM135BQ49AJ0 1406 aa23.47■■□□□ 1.35
RXRB-202ENST00000374685 PNPLA6Q8IY17 1366 aa23.47■■□□□ 1.35
RXRB-202ENST00000374685 SSH1Q8WYL5 1049 aa23.46■■□□□ 1.35
RXRB-202ENST00000374685 PNNQ9H307 717 aaKnown RBP23.46■■□□□ 1.35
RXRB-202ENST00000374685 PLEKHG1Q9ULL1 1385 aa23.46■■□□□ 1.35
RXRB-202ENST00000374685 MAP2P11137 1827 aaKnown RBP23.46■■□□□ 1.35
RXRB-202ENST00000374685 PLEKHG5O94827 1062 aa23.46■■□□□ 1.35
RXRB-202ENST00000374685 NUTM2GQ5VZR2 741 aa23.46■■□□□ 1.35
RXRB-202ENST00000374685 THEMISQ8N1K5 641 aaPredicted RBP23.46■■□□□ 1.35
RXRB-202ENST00000374685 PTPRUQ92729 1446 aa23.45■■□□□ 1.35
RXRB-202ENST00000374685 NGDNQ8NEJ9 315 aaKnown RBP23.45■■□□□ 1.34
RXRB-202ENST00000374685 MS4A1P11836 297 aa23.45■■□□□ 1.34
RXRB-202ENST00000374685 DCTN1Q14203 1278 aa23.45■■□□□ 1.34
RXRB-202ENST00000374685 IL13P35225 146 aa23.44■■□□□ 1.34
RXRB-202ENST00000374685 ANKRD26Q9UPS8 1709 aa23.44■■□□□ 1.34
RXRB-202ENST00000374685 FAM83GA6ND36 823 aa23.44■■□□□ 1.34
RXRB-202ENST00000374685 ZNF692Q9BU19 519 aaPredicted RBP23.44■■□□□ 1.34
RXRB-202ENST00000374685 TTC21BQ7Z4L5 1316 aa23.43■■□□□ 1.34
RXRB-202ENST00000374685 AEBP1Q8IUX7 1158 aa23.43■■□□□ 1.34
RXRB-202ENST00000374685 IPO9Q96P70 1041 aaKnown RBP23.43■■□□□ 1.34
RXRB-202ENST00000374685 ZKSCAN2Q63HK3 967 aa23.42■■□□□ 1.34
RXRB-202ENST00000374685 PCDHB15Q9Y5E8 787 aa23.42■■□□□ 1.34
RXRB-202ENST00000374685 TECPR2O15040 1411 aa23.42■■□□□ 1.34
RXRB-202ENST00000374685 LRRC7Q96NW7 1537 aa23.42■■□□□ 1.34
RXRB-202ENST00000374685 SIRT1Q96EB6 747 aa23.41■■□□□ 1.34
RXRB-202ENST00000374685 ZBTB47Q9UFB7 747 aaPredicted RBP23.41■■□□□ 1.34
RXRB-202ENST00000374685 ITPRIPQ8IWB1 547 aa23.41■■□□□ 1.34
RXRB-202ENST00000374685 NOB1Q9ULX3 412 aaKnown RBP23.41■■□□□ 1.34
RXRB-202ENST00000374685 ADGRB2O60241 1585 aa23.41■■□□□ 1.34
RXRB-202ENST00000374685 KCNA6P17658 529 aa23.4■■□□□ 1.34
RXRB-202ENST00000374685 HSP90AB2PQ58FF8 381 aa23.4■■□□□ 1.34
RXRB-202ENST00000374685 C14orf37Q86TY3 774 aa23.4■■□□□ 1.34
RXRB-202ENST00000374685 NFE2L2Q16236 605 aa23.4■■□□□ 1.34
RXRB-202ENST00000374685 SULT6B1Q6IMI4 303 aa23.4■■□□□ 1.34
RXRB-202ENST00000374685 DZIP1LQ8IYY4 767 aaKnown RBP23.4■■□□□ 1.34
RXRB-202ENST00000374685 IL27Q8NEV9 243 aa23.39■■□□□ 1.33
RXRB-202ENST00000374685 TRIM27P14373 513 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms