RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 ARHGEF10O15013 1369 aa21.06■□□□□ 0.96
PFDN6-202ENST00000374607 MEX3CQ5U5Q3 659 aaKnown RBP21.05■□□□□ 0.96
PFDN6-202ENST00000374607 SPATA31A6Q5VVP1 1343 aa21.04■□□□□ 0.96
PFDN6-202ENST00000374607 USP6P35125 1406 aa21.04■□□□□ 0.96
PFDN6-202ENST00000374607 C11orf95C9JLR9 678 aaPredicted RBP21.04■□□□□ 0.96
PFDN6-202ENST00000374607 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.04■□□□□ 0.96
PFDN6-202ENST00000374607 BRD4O60885 1362 aaPredicted RBP21.04■□□□□ 0.96
PFDN6-202ENST00000374607 PNPLA6Q8IY17 1366 aa21.04■□□□□ 0.96
PFDN6-202ENST00000374607 NUTM2GQ5VZR2 741 aa21.03■□□□□ 0.96
PFDN6-202ENST00000374607 KIF7Q2M1P5 1343 aa21.03■□□□□ 0.96
PFDN6-202ENST00000374607 SHPRHQ149N8 1683 aa21.02■□□□□ 0.96
PFDN6-202ENST00000374607 A0A1W2PP64 1363 aa21.02■□□□□ 0.96
PFDN6-202ENST00000374607 ANKRD36BQ8N2N9 1353 aa21.02■□□□□ 0.96
PFDN6-202ENST00000374607 AKAP12Q02952 1782 aa21.02■□□□□ 0.96
PFDN6-202ENST00000374607 CPSF1Q10570 1443 aaKnown RBP21.02■□□□□ 0.96
PFDN6-202ENST00000374607 TTC21BQ7Z4L5 1316 aa21.01■□□□□ 0.95
PFDN6-202ENST00000374607 TTC21AQ8NDW8 1320 aa21.01■□□□□ 0.95
PFDN6-202ENST00000374607 TRPM3Q9HCF6 1732 aaPredicted RBP21.01■□□□□ 0.95
PFDN6-202ENST00000374607 NLRP13Q86W25 1043 aa21■□□□□ 0.95
PFDN6-202ENST00000374607 NLRP6P59044 892 aa20.99■□□□□ 0.95
PFDN6-202ENST00000374607 EDC4Q6P2E9 1401 aaKnown RBP20.98■□□□□ 0.95
PFDN6-202ENST00000374607 CD163L1Q9NR16 1453 aa20.98■□□□□ 0.95
PFDN6-202ENST00000374607 ADAMTS2O95450 1211 aa20.97■□□□□ 0.95
PFDN6-202ENST00000374607 CABLES1Q8TDN4 633 aa20.97■□□□□ 0.95
PFDN6-202ENST00000374607 CCDC7Q96M83 1385 aa20.97■□□□□ 0.95
PFDN6-202ENST00000374607 MON2Q7Z3U7 1717 aa20.96■□□□□ 0.95
PFDN6-202ENST00000374607 PANK3Q9H999 370 aa20.96■□□□□ 0.95
PFDN6-202ENST00000374607 RGS17Q9UGC6 210 aaPredicted RBP20.96■□□□□ 0.95
PFDN6-202ENST00000374607 MYOM1P52179 1685 aa20.96■□□□□ 0.95
PFDN6-202ENST00000374607 SOCS7O14512 581 aa20.95■□□□□ 0.94
PFDN6-202ENST00000374607 WASHC2AQ641Q2 1341 aa20.95■□□□□ 0.94
PFDN6-202ENST00000374607 ALS2Q96Q42 1657 aa20.95■□□□□ 0.94
PFDN6-202ENST00000374607 COL22A1Q8NFW1 1626 aaPredicted RBP20.93■□□□□ 0.94
PFDN6-202ENST00000374607 NME9Q86XW9 330 aa20.93■□□□□ 0.94
PFDN6-202ENST00000374607 LRP6O75581 1613 aa20.93■□□□□ 0.94
PFDN6-202ENST00000374607 C8orf37Q96NL8 207 aa20.92■□□□□ 0.94
PFDN6-202ENST00000374607 SSH2Q76I76 1423 aa20.92■□□□□ 0.94
PFDN6-202ENST00000374607 NSD3Q9BZ95 1437 aa20.92■□□□□ 0.94
PFDN6-202ENST00000374607 SOX12O15370 315 aa20.91■□□□□ 0.94
PFDN6-202ENST00000374607 NRKQ7Z2Y5 1582 aa20.91■□□□□ 0.94
PFDN6-202ENST00000374607 COG3Q96JB2 828 aa20.91■□□□□ 0.94
PFDN6-202ENST00000374607 KNSTRNQ9Y448 316 aa20.91■□□□□ 0.94
PFDN6-202ENST00000374607 CGNL1Q0VF96 1302 aa20.9■□□□□ 0.94
PFDN6-202ENST00000374607 ZBTB7CA1YPR0 619 aa20.9■□□□□ 0.94
PFDN6-202ENST00000374607 NGLY1Q96IV0 654 aa20.9■□□□□ 0.94
PFDN6-202ENST00000374607 CARD14Q9BXL6 1004 aa20.89■□□□□ 0.93
PFDN6-202ENST00000374607 KCNH5Q8NCM2 988 aa20.88■□□□□ 0.93
PFDN6-202ENST00000374607 ZRANB1Q9UGI0 708 aa20.88■□□□□ 0.93
PFDN6-202ENST00000374607 PIK3C2AO00443 1686 aa20.88■□□□□ 0.93
PFDN6-202ENST00000374607 GCP02774 474 aa20.87■□□□□ 0.93
PFDN6-202ENST00000374607 ZC3H6P61129 1189 aaKnown RBP20.87■□□□□ 0.93
PFDN6-202ENST00000374607 GGNBP2Q9H3C7 697 aa20.87■□□□□ 0.93
PFDN6-202ENST00000374607 POTEAQ6S8J7 498 aa20.86■□□□□ 0.93
PFDN6-202ENST00000374607 PRDM11Q9NQV5 511 aa20.86■□□□□ 0.93
PFDN6-202ENST00000374607 USP19O94966 1318 aa20.85■□□□□ 0.93
PFDN6-202ENST00000374607 FYB1O15117 783 aa20.85■□□□□ 0.93
PFDN6-202ENST00000374607 USP31Q70CQ4 1352 aa20.84■□□□□ 0.93
PFDN6-202ENST00000374607 PHRF1Q9P1Y6 1649 aaKnown RBP20.83■□□□□ 0.93
PFDN6-202ENST00000374607 ZNF316A6NFI3 1004 aaPredicted RBP20.83■□□□□ 0.93
PFDN6-202ENST00000374607 ABCA3Q99758 1704 aa20.83■□□□□ 0.92
PFDN6-202ENST00000374607 CNGB1Q14028 1251 aaPredicted RBP20.82■□□□□ 0.92
PFDN6-202ENST00000374607 KIF20BQ96Q89 1820 aa20.82■□□□□ 0.92
PFDN6-202ENST00000374607 KIAA0232Q92628 1395 aa20.81■□□□□ 0.92
PFDN6-202ENST00000374607 AFF2P51816 1311 aa20.8■□□□□ 0.92
PFDN6-202ENST00000374607 ZNF772Q68DY9 489 aaPredicted RBP20.8■□□□□ 0.92
PFDN6-202ENST00000374607 MARF1Q9Y4F3 1742 aaKnown RBP20.8■□□□□ 0.92
PFDN6-202ENST00000374607 FAM83GA6ND36 823 aa20.79■□□□□ 0.92
PFDN6-202ENST00000374607 DDX10Q13206 875 aaKnown RBP20.79■□□□□ 0.92
PFDN6-202ENST00000374607 CHRNA2Q15822 529 aa20.79■□□□□ 0.92
PFDN6-202ENST00000374607 USP21Q9UK80 565 aa20.79■□□□□ 0.92
PFDN6-202ENST00000374607 SLIT3O75094 1523 aa20.78■□□□□ 0.92
PFDN6-202ENST00000374607 CRYBG1Q9Y4K1 1723 aa20.78■□□□□ 0.92
PFDN6-202ENST00000374607 MORC1Q86VD1 984 aa20.78■□□□□ 0.92
PFDN6-202ENST00000374607 OVOS2A0A0J9YW53 1432 aa20.78■□□□□ 0.92
PFDN6-202ENST00000374607 OVOS2Q6IE36 1432 aa20.78■□□□□ 0.92
PFDN6-202ENST00000374607 NSD2O96028 1365 aa20.77■□□□□ 0.92
PFDN6-202ENST00000374607 EVA1CP58658 441 aa20.77■□□□□ 0.92
PFDN6-202ENST00000374607 BTG4Q9NY30 223 aa20.77■□□□□ 0.92
PFDN6-202ENST00000374607 TNNT2P45379 298 aaPredicted RBP20.76■□□□□ 0.91
PFDN6-202ENST00000374607 CC2D1BQ5T0F9 858 aaKnown RBP20.76■□□□□ 0.91
PFDN6-202ENST00000374607 CPDO75976 1380 aa20.75■□□□□ 0.91
PFDN6-202ENST00000374607 CCDC9Q9Y3X0 531 aaKnown RBP20.75■□□□□ 0.91
PFDN6-202ENST00000374607 COL14A1Q05707 1796 aaKnown RBP20.74■□□□□ 0.91
PFDN6-202ENST00000374607 USP54Q70EL1 1684 aa20.74■□□□□ 0.91
PFDN6-202ENST00000374607 AMPHP49418 695 aa20.74■□□□□ 0.91
PFDN6-202ENST00000374607 FNBP4Q8N3X1 1017 aaPredicted RBP20.74■□□□□ 0.91
PFDN6-202ENST00000374607 STRN4Q9NRL3 753 aa20.74■□□□□ 0.91
PFDN6-202ENST00000374607 PER1O15534 1290 aaPredicted RBP20.73■□□□□ 0.91
PFDN6-202ENST00000374607 ARHGEF25Q86VW2 580 aa20.73■□□□□ 0.91
PFDN6-202ENST00000374607 UNC5CLQ8IV45 518 aa20.73■□□□□ 0.91
PFDN6-202ENST00000374607 PPM1GO15355 546 aaPredicted RBP20.72■□□□□ 0.91
PFDN6-202ENST00000374607 AMER1Q5JTC6 1135 aaPredicted RBP20.72■□□□□ 0.91
PFDN6-202ENST00000374607 QTRT2Q9H974 415 aaKnown RBP20.72■□□□□ 0.91
PFDN6-202ENST00000374607 FBLN1P23142 703 aa20.71■□□□□ 0.91
PFDN6-202ENST00000374607 RRS1Q15050 365 aaKnown RBP20.71■□□□□ 0.91
PFDN6-202ENST00000374607 TRPC5Q9UL62 973 aaPredicted RBP20.71■□□□□ 0.91
PFDN6-202ENST00000374607 NFAT5O94916 1531 aa20.71■□□□□ 0.91
PFDN6-202ENST00000374607 PLCH1Q4KWH8 1693 aa20.7■□□□□ 0.91
PFDN6-202ENST00000374607 CSB-PGBD3P0DP91 1061 aa20.7■□□□□ 0.9
PFDN6-202ENST00000374607 AATKQ6ZMQ8 1374 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms