RNA–Protein interactions for RNA: ENST00000373487.8

PBX3-203, Transcript of PBX homeobox 3, humanhuman

TSL 5 BASIC

Gene PBX3, Length 2,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-203ENST00000373487 SEC24BO95487 1268 aa19.4■□□□□ 0.7
PBX3-203ENST00000373487 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.4■□□□□ 0.7
PBX3-203ENST00000373487 MLECQ14165 292 aa19.4■□□□□ 0.7
PBX3-203ENST00000373487 PMFBP1Q8TBY8 1022 aa19.39■□□□□ 0.7
PBX3-203ENST00000373487 TSPOAP1O95153 1857 aa19.39■□□□□ 0.69
PBX3-203ENST00000373487 CLTCQ00610 1675 aaKnown RBP19.39■□□□□ 0.69
PBX3-203ENST00000373487 NCBP3Q53F19 620 aaKnown RBP19.38■□□□□ 0.69
PBX3-203ENST00000373487 SMC4Q9NTJ3 1288 aa19.38■□□□□ 0.69
PBX3-203ENST00000373487 ARHGEF40Q8TER5 1519 aa19.38■□□□□ 0.69
PBX3-203ENST00000373487 DIAPH1O60610 1272 aaKnown RBP19.38■□□□□ 0.69
PBX3-203ENST00000373487 ZKSCAN2Q63HK3 967 aa19.38■□□□□ 0.69
PBX3-203ENST00000373487 FTSJ3Q8IY81 847 aaKnown RBP19.38■□□□□ 0.69
PBX3-203ENST00000373487 ANKRD26Q9UPS8 1709 aa19.37■□□□□ 0.69
PBX3-203ENST00000373487 RIPK4P57078 832 aa19.37■□□□□ 0.69
PBX3-203ENST00000373487 MVPQ14764 893 aaKnown RBP19.37■□□□□ 0.69
PBX3-203ENST00000373487 USP35Q9P2H5 1018 aa19.37■□□□□ 0.69
PBX3-203ENST00000373487 USP19O94966 1318 aa19.37■□□□□ 0.69
PBX3-203ENST00000373487 PDZRN3Q9UPQ7 1066 aa19.36■□□□□ 0.69
PBX3-203ENST00000373487 DZIP1LQ8IYY4 767 aaKnown RBP19.36■□□□□ 0.69
PBX3-203ENST00000373487 SSH1Q8WYL5 1049 aa19.35■□□□□ 0.69
PBX3-203ENST00000373487 MED14O60244 1454 aa19.35■□□□□ 0.69
PBX3-203ENST00000373487 VIRMAQ69YN4 1812 aaKnown RBP19.35■□□□□ 0.69
PBX3-203ENST00000373487 AAMPQ13685 434 aa19.34■□□□□ 0.69
PBX3-203ENST00000373487 TRIM27P14373 513 aa19.34■□□□□ 0.69
PBX3-203ENST00000373487 NFKBIBQ15653 356 aa19.34■□□□□ 0.69
PBX3-203ENST00000373487 RWDD1Q9H446 243 aaPredicted RBP19.33■□□□□ 0.69
PBX3-203ENST00000373487 A2ML1A8K2U0 1454 aa19.33■□□□□ 0.68
PBX3-203ENST00000373487 PNPLA6Q8IY17 1366 aa19.32■□□□□ 0.68
PBX3-203ENST00000373487 RIMS2Q9UQ26 1411 aa19.32■□□□□ 0.68
PBX3-203ENST00000373487 KIF20BQ96Q89 1820 aa19.32■□□□□ 0.68
PBX3-203ENST00000373487 DIP2BQ9P265 1576 aa19.31■□□□□ 0.68
PBX3-203ENST00000373487 POLKQ9UBT6 870 aa19.31■□□□□ 0.68
PBX3-203ENST00000373487 NOB1Q9ULX3 412 aaKnown RBP19.31■□□□□ 0.68
PBX3-203ENST00000373487 CT47B1P0C2W7 299 aaPredicted RBP19.31■□□□□ 0.68
PBX3-203ENST00000373487 ITPRIPQ8IWB1 547 aa19.31■□□□□ 0.68
PBX3-203ENST00000373487 PRKAR2BP31323 418 aa19.3■□□□□ 0.68
PBX3-203ENST00000373487 HMOX1P09601 288 aa19.29■□□□□ 0.68
PBX3-203ENST00000373487 ATF7IPQ6VMQ6 1270 aa19.28■□□□□ 0.68
PBX3-203ENST00000373487 ZRANB1Q9UGI0 708 aa19.28■□□□□ 0.68
PBX3-203ENST00000373487 LRRC7Q96NW7 1537 aa19.28■□□□□ 0.68
PBX3-203ENST00000373487 IL16Q14005 1332 aa19.28■□□□□ 0.68
PBX3-203ENST00000373487 RSPH6AQ9H0K4 717 aa19.27■□□□□ 0.68
PBX3-203ENST00000373487 NCKAP5LQ9HCH0 1330 aa19.27■□□□□ 0.68
PBX3-203ENST00000373487 FCHSD2O94868 740 aa19.27■□□□□ 0.67
PBX3-203ENST00000373487 EMILIN1Q9Y6C2 1016 aa19.27■□□□□ 0.67
PBX3-203ENST00000373487 TXNDC2Q86VQ3 553 aa19.26■□□□□ 0.67
PBX3-203ENST00000373487 NME9Q86XW9 330 aa19.26■□□□□ 0.67
PBX3-203ENST00000373487 TMEM57Q8N5G2 664 aa19.26■□□□□ 0.67
PBX3-203ENST00000373487 PHACTR3Q96KR7 559 aa19.26■□□□□ 0.67
PBX3-203ENST00000373487 THUMPD2Q9BTF0 503 aaKnown RBP19.26■□□□□ 0.67
PBX3-203ENST00000373487 PNNQ9H307 717 aaKnown RBP19.26■□□□□ 0.67
PBX3-203ENST00000373487 RIMBP3CA6NJZ7 1639 aa19.26■□□□□ 0.67
PBX3-203ENST00000373487 RIMBP3BA6NNM3 1639 aa19.26■□□□□ 0.67
PBX3-203ENST00000373487 RIMBP3Q9UFD9 1639 aa19.26■□□□□ 0.67
PBX3-203ENST00000373487 SETD1AO15047 1707 aaKnown RBP19.25■□□□□ 0.67
PBX3-203ENST00000373487 AGLP35573 1532 aa19.25■□□□□ 0.67
PBX3-203ENST00000373487 SPATA31D1Q6ZQQ2 1576 aa19.25■□□□□ 0.67
PBX3-203ENST00000373487 DLC1Q96QB1 1528 aa19.25■□□□□ 0.67
PBX3-203ENST00000373487 METP08581 1390 aa19.25■□□□□ 0.67
PBX3-203ENST00000373487 ATP7BP35670 1465 aa19.24■□□□□ 0.67
PBX3-203ENST00000373487 DDX19BQ9UMR2 479 aa19.24■□□□□ 0.67
PBX3-203ENST00000373487 PPP6R1Q9UPN7 881 aa19.24■□□□□ 0.67
PBX3-203ENST00000373487 MAP2P11137 1827 aaKnown RBP19.23■□□□□ 0.67
PBX3-203ENST00000373487 WASLO00401 505 aaPredicted RBP19.23■□□□□ 0.67
PBX3-203ENST00000373487 FAM135BQ49AJ0 1406 aa19.23■□□□□ 0.67
PBX3-203ENST00000373487 PPIP5K1Q6PFW1 1433 aa19.23■□□□□ 0.67
PBX3-203ENST00000373487 REREQ9P2R6 1566 aa19.23■□□□□ 0.67
PBX3-203ENST00000373487 FRAT2O75474 233 aaPredicted RBP19.23■□□□□ 0.67
PBX3-203ENST00000373487 CDC42BPGQ6DT37 1551 aa19.21■□□□□ 0.67
PBX3-203ENST00000373487 NRXN3Q9Y4C0 1643 aa19.2■□□□□ 0.66
PBX3-203ENST00000373487 HDAC1Q13547 482 aaPredicted RBP19.2■□□□□ 0.66
PBX3-203ENST00000373487 RRS1Q15050 365 aaKnown RBP19.2■□□□□ 0.66
PBX3-203ENST00000373487 NFE2L2Q16236 605 aa19.2■□□□□ 0.66
PBX3-203ENST00000373487 NUDT16Q96DE0 195 aaKnown RBP19.2■□□□□ 0.66
PBX3-203ENST00000373487 KIF16BQ96L93 1317 aa19.19■□□□□ 0.66
PBX3-203ENST00000373487 CPSF1Q10570 1443 aaKnown RBP19.19■□□□□ 0.66
PBX3-203ENST00000373487 UPF2Q9HAU5 1272 aaKnown RBP19.19■□□□□ 0.66
PBX3-203ENST00000373487 ZBTB40Q9NUA8 1239 aa19.19■□□□□ 0.66
PBX3-203ENST00000373487 IL13P35225 146 aa19.19■□□□□ 0.66
PBX3-203ENST00000373487 TBC1D32Q96NH3 1257 aa19.19■□□□□ 0.66
PBX3-203ENST00000373487 EDC4Q6P2E9 1401 aaKnown RBP19.18■□□□□ 0.66
PBX3-203ENST00000373487 ELL2O00472 640 aaPredicted RBP19.18■□□□□ 0.66
PBX3-203ENST00000373487 IPO8O15397 1037 aaKnown RBP19.18■□□□□ 0.66
PBX3-203ENST00000373487 TSPYL6Q8N831 410 aa19.18■□□□□ 0.66
PBX3-203ENST00000373487 ZMYM3Q14202 1370 aa19.18■□□□□ 0.66
PBX3-203ENST00000373487 SLKQ9H2G2 1235 aaPredicted RBP19.18■□□□□ 0.66
PBX3-203ENST00000373487 ESF1Q9H501 851 aaKnown RBP19.18■□□□□ 0.66
PBX3-203ENST00000373487 BECN1Q14457 450 aa19.17■□□□□ 0.66
PBX3-203ENST00000373487 GSE1Q14687 1217 aa19.17■□□□□ 0.66
PBX3-203ENST00000373487 ALDH1L2Q3SY69 923 aa19.17■□□□□ 0.66
PBX3-203ENST00000373487 CPS1P31327 1500 aa19.16■□□□□ 0.66
PBX3-203ENST00000373487 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.15■□□□□ 0.66
PBX3-203ENST00000373487 COG3Q96JB2 828 aa19.15■□□□□ 0.66
PBX3-203ENST00000373487 VAMP4O75379 141 aa19.14■□□□□ 0.66
PBX3-203ENST00000373487 SMC5Q8IY18 1101 aa19.14■□□□□ 0.66
PBX3-203ENST00000373487 CCDC61Q9Y6R9 512 aa19.14■□□□□ 0.65
PBX3-203ENST00000373487 MFAP1P55081 439 aaKnown RBP19.14■□□□□ 0.65
PBX3-203ENST00000373487 MBIPQ9NS73 344 aa19.14■□□□□ 0.65
PBX3-203ENST00000373487 FAM83GA6ND36 823 aa19.13■□□□□ 0.65
PBX3-203ENST00000373487 IL27Q8NEV9 243 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms