RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 CHMP4AQ9BY43 222 aa8.1□□□□□ -1.11
CHD6-203ENST00000373233 CHMP4BQ9H444 224 aaKnown RBP8.1□□□□□ -1.11
CHD6-203ENST00000373233 MYOM2P54296 1465 aa8.1□□□□□ -1.11
CHD6-203ENST00000373233 RDXP35241 583 aaKnown RBP8.1□□□□□ -1.11
CHD6-203ENST00000373233 SKOR2Q2VWA4 1001 aaPredicted RBP8.1□□□□□ -1.11
CHD6-203ENST00000373233 CGNQ9P2M7 1197 aaKnown RBP8.1□□□□□ -1.11
CHD6-203ENST00000373233 WWC1Q8IX03 1113 aa8.1□□□□□ -1.11
CHD6-203ENST00000373233 DEPDC5O75140 1603 aa8.09□□□□□ -1.11
CHD6-203ENST00000373233 LAMC1P11047 1609 aa8.09□□□□□ -1.11
CHD6-203ENST00000373233 PTPRTO14522 1441 aa8.09□□□□□ -1.11
CHD6-203ENST00000373233 SPATA31E1Q6ZUB1 1445 aa8.09□□□□□ -1.11
CHD6-203ENST00000373233 GLI2P10070 1586 aa8.09□□□□□ -1.11
CHD6-203ENST00000373233 ZNF526Q8TF50 670 aaPredicted RBP8.09□□□□□ -1.11
CHD6-203ENST00000373233 MYO5BQ9ULV0 1848 aa8.09□□□□□ -1.11
CHD6-203ENST00000373233 SLC12A5Q9H2X9 1139 aa8.09□□□□□ -1.11
CHD6-203ENST00000373233 DEF6Q9H4E7 631 aa8.09□□□□□ -1.11
CHD6-203ENST00000373233 NEFHP12036 1026 aa8.09□□□□□ -1.12
CHD6-203ENST00000373233 PPLO60437 1756 aa8.08□□□□□ -1.12
CHD6-203ENST00000373233 HSP90AB3PQ58FF7 597 aa8.08□□□□□ -1.12
CHD6-203ENST00000373233 DIP2BQ9P265 1576 aa8.08□□□□□ -1.12
CHD6-203ENST00000373233 MEX3CQ5U5Q3 659 aaKnown RBP8.08□□□□□ -1.12
CHD6-203ENST00000373233 SYNMO15061 1565 aa8.08□□□□□ -1.12
CHD6-203ENST00000373233 NFKBIBQ15653 356 aa8.08□□□□□ -1.12
CHD6-203ENST00000373233 KIAA1210Q9ULL0 1709 aa8.08□□□□□ -1.12
CHD6-203ENST00000373233 UQCRHLA0A096LP55 91 aa8.08□□□□□ -1.12
CHD6-203ENST00000373233 UQCRHP07919 91 aa8.08□□□□□ -1.12
CHD6-203ENST00000373233 CCDC184Q52MB2 194 aa8.08□□□□□ -1.12
CHD6-203ENST00000373233 GGNBP2Q9H3C7 697 aa8.08□□□□□ -1.12
CHD6-203ENST00000373233 RICTORQ6R327 1708 aa8.07□□□□□ -1.12
CHD6-203ENST00000373233 GPRASP1Q5JY77 1395 aa8.07□□□□□ -1.12
CHD6-203ENST00000373233 SLC4A3P48751 1232 aa8.07□□□□□ -1.12
CHD6-203ENST00000373233 PNISRQ8TF01 805 aaKnown RBP8.07□□□□□ -1.12
CHD6-203ENST00000373233 ADAMTS8Q9UP79 889 aa8.07□□□□□ -1.12
CHD6-203ENST00000373233 AMPHP49418 695 aa8.07□□□□□ -1.12
CHD6-203ENST00000373233 HMGN5P82970 282 aaKnown RBP8.07□□□□□ -1.12
CHD6-203ENST00000373233 HOMEZQ8IX15 550 aa8.07□□□□□ -1.12
CHD6-203ENST00000373233 RTF1Q92541 710 aaKnown RBP8.07□□□□□ -1.12
CHD6-203ENST00000373233 CCDC39Q9UFE4 941 aa8.07□□□□□ -1.12
CHD6-203ENST00000373233 KIF16BQ96L93 1317 aa8.07□□□□□ -1.12
CHD6-203ENST00000373233 PLA2R1Q13018 1463 aa8.07□□□□□ -1.12
CHD6-203ENST00000373233 LMOD3Q0VAK6 560 aa8.07□□□□□ -1.12
CHD6-203ENST00000373233 MROH2AA6NES4 1674 aa8.07□□□□□ -1.12
CHD6-203ENST00000373233 PREX1Q8TCU6 1659 aa8.07□□□□□ -1.12
CHD6-203ENST00000373233 SETD1BQ9UPS6 1966 aaKnown RBP8.07□□□□□ -1.12
CHD6-203ENST00000373233 CABP1Q9NZU7 370 aa8.07□□□□□ -1.12
CHD6-203ENST00000373233 DIAPH1O60610 1272 aaKnown RBP8.07□□□□□ -1.12
CHD6-203ENST00000373233 RUNDC1Q96C34 613 aa8.07□□□□□ -1.12
CHD6-203ENST00000373233 BCL11BQ9C0K0 894 aaPredicted RBP8.07□□□□□ -1.12
CHD6-203ENST00000373233 NINLQ9Y2I6 1382 aa8.07□□□□□ -1.12
CHD6-203ENST00000373233 PDE4AP27815 886 aa8.07□□□□□ -1.12
CHD6-203ENST00000373233 APAF1O14727 1248 aa8.06□□□□□ -1.12
CHD6-203ENST00000373233 NASPP49321 788 aaPredicted RBP8.06□□□□□ -1.12
CHD6-203ENST00000373233 MRE11P49959 708 aa8.06□□□□□ -1.12
CHD6-203ENST00000373233 ZNF592Q92610 1267 aa8.06□□□□□ -1.12
CHD6-203ENST00000373233 CEBPAP49715 358 aaPredicted RBP8.06□□□□□ -1.12
CHD6-203ENST00000373233 ANKLE2Q86XL3 938 aa8.06□□□□□ -1.12
CHD6-203ENST00000373233 CFAP44Q96MT7 982 aa8.06□□□□□ -1.12
CHD6-203ENST00000373233 ZMYM3Q14202 1370 aa8.06□□□□□ -1.12
CHD6-203ENST00000373233 H0YHG0 523 aa8.06□□□□□ -1.12
CHD6-203ENST00000373233 ARGLU1Q9NWB6 273 aaPredicted RBP8.06□□□□□ -1.12
CHD6-203ENST00000373233 ARHGEF40Q8TER5 1519 aa8.05□□□□□ -1.12
CHD6-203ENST00000373233 TESK2Q96S53 571 aa8.05□□□□□ -1.12
CHD6-203ENST00000373233 RRP1P56182 461 aaKnown RBP8.05□□□□□ -1.12
CHD6-203ENST00000373233 CCAR2Q8N163 923 aaKnown RBP8.05□□□□□ -1.12
CHD6-203ENST00000373233 SMG6Q86US8 1419 aaKnown RBP8.05□□□□□ -1.12
CHD6-203ENST00000373233 ERVK-7P63135 1459 aa8.05□□□□□ -1.12
CHD6-203ENST00000373233 ERICH4A6NGS2 130 aa8.05□□□□□ -1.12
CHD6-203ENST00000373233 NGEFQ8N5V2 710 aa8.05□□□□□ -1.12
CHD6-203ENST00000373233 LTV1Q96GA3 475 aaPredicted RBP8.05□□□□□ -1.12
CHD6-203ENST00000373233 A0A0G2JS52 829 aa8.05□□□□□ -1.12
CHD6-203ENST00000373233 LMTK2Q8IWU2 1503 aa8.05□□□□□ -1.12
CHD6-203ENST00000373233 MTHFSP49914 203 aa8.05□□□□□ -1.12
CHD6-203ENST00000373233 PLCD3Q8N3E9 789 aa8.05□□□□□ -1.12
CHD6-203ENST00000373233 SLC26A8Q96RN1 970 aa8.05□□□□□ -1.12
CHD6-203ENST00000373233 YTHDC2Q9H6S0 1430 aaKnown RBP8.05□□□□□ -1.12
CHD6-203ENST00000373233 IQGAP1P46940 1657 aa8.04□□□□□ -1.12
CHD6-203ENST00000373233 WAPLQ7Z5K2 1190 aa8.04□□□□□ -1.12
CHD6-203ENST00000373233 NSD2O96028 1365 aa8.04□□□□□ -1.12
CHD6-203ENST00000373233 ADGRB3O60242 1522 aa8.04□□□□□ -1.12
CHD6-203ENST00000373233 PARD3Q8TEW0 1356 aa8.04□□□□□ -1.12
CHD6-203ENST00000373233 IPO8O15397 1037 aaKnown RBP8.04□□□□□ -1.12
CHD6-203ENST00000373233 PDCL3Q9H2J4 239 aa8.04□□□□□ -1.12
CHD6-203ENST00000373233 PSME1Q06323 249 aa8.04□□□□□ -1.12
CHD6-203ENST00000373233 BRD2P25440 801 aaKnown RBP8.04□□□□□ -1.12
CHD6-203ENST00000373233 GNL2Q13823 731 aaKnown RBP8.04□□□□□ -1.12
CHD6-203ENST00000373233 TULP1O00294 542 aaPredicted RBP8.04□□□□□ -1.12
CHD6-203ENST00000373233 MFAP1P55081 439 aaKnown RBP8.03□□□□□ -1.12
CHD6-203ENST00000373233 FER1L4A9Z1Z3 1794 aa8.03□□□□□ -1.12
CHD6-203ENST00000373233 CSB-PGBD3P0DP91 1061 aa8.03□□□□□ -1.12
CHD6-203ENST00000373233 RBM25P49756 843 aaKnown RBP8.03□□□□□ -1.12
CHD6-203ENST00000373233 CCDC191Q8NCU4 936 aa8.03□□□□□ -1.12
CHD6-203ENST00000373233 TNNT1P13805 278 aa8.02□□□□□ -1.12
CHD6-203ENST00000373233 MCCP23508 829 aa8.02□□□□□ -1.13
CHD6-203ENST00000373233 PIK3C2GO75747 1445 aa8.02□□□□□ -1.13
CHD6-203ENST00000373233 ITPRIPQ8IWB1 547 aa8.02□□□□□ -1.13
CHD6-203ENST00000373233 AK7Q96M32 723 aa8.02□□□□□ -1.13
CHD6-203ENST00000373233 DIAPH3Q9NSV4 1193 aa8.02□□□□□ -1.13
CHD6-203ENST00000373233 SMC4Q9NTJ3 1288 aa8.02□□□□□ -1.13
CHD6-203ENST00000373233 FAM161AQ3B820 660 aa8.02□□□□□ -1.13
CHD6-203ENST00000373233 WASLO00401 505 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms