RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 CERS3Q8IU89 383 aa13.55□□□□□ -0.24
SYNPO2L-201ENST00000372873 KIAA1107Q9UPP5 1409 aa13.55□□□□□ -0.24
SYNPO2L-201ENST00000372873 SPAG9O60271 1321 aaKnown RBP13.54□□□□□ -0.24
SYNPO2L-201ENST00000372873 GGT6Q6P531 493 aa13.54□□□□□ -0.24
SYNPO2L-201ENST00000372873 GPATCH11Q8N954 259 aa13.54□□□□□ -0.24
SYNPO2L-201ENST00000372873 SNX21Q969T3 373 aa13.54□□□□□ -0.24
SYNPO2L-201ENST00000372873 RBM42Q9BTD8 480 aaKnown RBP13.54□□□□□ -0.24
SYNPO2L-201ENST00000372873 TCP11L2Q8N4U5 519 aa13.54□□□□□ -0.24
SYNPO2L-201ENST00000372873 RTF1Q92541 710 aaKnown RBP13.54□□□□□ -0.24
SYNPO2L-201ENST00000372873 CHD1LQ86WJ1 897 aa13.53□□□□□ -0.24
SYNPO2L-201ENST00000372873 C9orf84Q5VXU9 1444 aa13.53□□□□□ -0.24
SYNPO2L-201ENST00000372873 SAFB2Q14151 953 aaKnown RBP eCLIP13.53□□□□□ -0.24
SYNPO2L-201ENST00000372873 C17orf53Q8N3J3 647 aaPredicted RBP13.53□□□□□ -0.24
SYNPO2L-201ENST00000372873 MNS1Q8NEH6 495 aa13.53□□□□□ -0.24
SYNPO2L-201ENST00000372873 BCL2L12Q9HB09 334 aa13.53□□□□□ -0.24
SYNPO2L-201ENST00000372873 ROCK1Q13464 1354 aa13.53□□□□□ -0.24
SYNPO2L-201ENST00000372873 GRIN2AQ12879 1464 aa13.53□□□□□ -0.24
SYNPO2L-201ENST00000372873 ELL2O00472 640 aaPredicted RBP13.53□□□□□ -0.24
SYNPO2L-201ENST00000372873 GAS2L2Q8NHY3 880 aa13.53□□□□□ -0.24
SYNPO2L-201ENST00000372873 DEF6Q9H4E7 631 aa13.53□□□□□ -0.24
SYNPO2L-201ENST00000372873 NKTRP30414 1462 aaKnown RBP13.52□□□□□ -0.24
SYNPO2L-201ENST00000372873 FIBPO43427 364 aa13.52□□□□□ -0.24
SYNPO2L-201ENST00000372873 TNNT1P13805 278 aa13.52□□□□□ -0.24
SYNPO2L-201ENST00000372873 RUNDC1Q96C34 613 aa13.52□□□□□ -0.24
SYNPO2L-201ENST00000372873 PLEKHH2Q8IVE3 1493 aa13.52□□□□□ -0.25
SYNPO2L-201ENST00000372873 RARSP54136 660 aaKnown RBP13.52□□□□□ -0.25
SYNPO2L-201ENST00000372873 ZNF445P59923 1031 aa13.52□□□□□ -0.25
SYNPO2L-201ENST00000372873 GTF2A1P52655 376 aaPredicted RBP13.51□□□□□ -0.25
SYNPO2L-201ENST00000372873 NOL10Q9BSC4 688 aaKnown RBP13.51□□□□□ -0.25
SYNPO2L-201ENST00000372873 GORABQ5T7V8 394 aa13.51□□□□□ -0.25
SYNPO2L-201ENST00000372873 POLR3GO15318 223 aaPredicted RBP13.51□□□□□ -0.25
SYNPO2L-201ENST00000372873 CCDC27Q2M243 656 aa13.51□□□□□ -0.25
SYNPO2L-201ENST00000372873 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.5□□□□□ -0.25
SYNPO2L-201ENST00000372873 ZBTB22O15209 634 aa13.5□□□□□ -0.25
SYNPO2L-201ENST00000372873 ZSCAN20P17040 1043 aaPredicted RBP13.5□□□□□ -0.25
SYNPO2L-201ENST00000372873 SETQ01105 290 aaPredicted RBP13.5□□□□□ -0.25
SYNPO2L-201ENST00000372873 GDPD2Q9HCC8 539 aa13.5□□□□□ -0.25
SYNPO2L-201ENST00000372873 CAMSAP2Q08AD1 1489 aa13.5□□□□□ -0.25
SYNPO2L-201ENST00000372873 USP19O94966 1318 aa13.5□□□□□ -0.25
SYNPO2L-201ENST00000372873 WWC1Q8IX03 1113 aa13.5□□□□□ -0.25
SYNPO2L-201ENST00000372873 ARHGEF11O15085 1522 aa13.5□□□□□ -0.25
SYNPO2L-201ENST00000372873 TPM4P67936 248 aa13.5□□□□□ -0.25
SYNPO2L-201ENST00000372873 ANO2Q9NQ90 1003 aa13.5□□□□□ -0.25
SYNPO2L-201ENST00000372873 GABPB1Q06547 395 aaPredicted RBP13.49□□□□□ -0.25
SYNPO2L-201ENST00000372873 RIOK3O14730 519 aaKnown RBP13.49□□□□□ -0.25
SYNPO2L-201ENST00000372873 HCLS1P14317 486 aaPredicted RBP13.49□□□□□ -0.25
SYNPO2L-201ENST00000372873 AFAP1Q8N556 730 aa13.49□□□□□ -0.25
SYNPO2L-201ENST00000372873 RILPL2Q969X0 211 aa13.49□□□□□ -0.25
SYNPO2L-201ENST00000372873 LEKR1Q6ZMV7 388 aa13.49□□□□□ -0.25
SYNPO2L-201ENST00000372873 C1orf115Q9H7X2 142 aa13.49□□□□□ -0.25
SYNPO2L-201ENST00000372873 NUTM2DQ5VT03 806 aaPredicted RBP13.49□□□□□ -0.25
SYNPO2L-201ENST00000372873 PIBF1Q8WXW3 757 aa13.49□□□□□ -0.25
SYNPO2L-201ENST00000372873 AK7Q96M32 723 aa13.49□□□□□ -0.25
SYNPO2L-201ENST00000372873 VPS37CA5D8V6 355 aaPredicted RBP13.48□□□□□ -0.25
SYNPO2L-201ENST00000372873 CCDC192P0DO97 292 aa13.48□□□□□ -0.25
SYNPO2L-201ENST00000372873 PLPPR3Q6T4P5 718 aa13.48□□□□□ -0.25
SYNPO2L-201ENST00000372873 KANK1Q14678 1352 aa13.48□□□□□ -0.25
SYNPO2L-201ENST00000372873 RPRD2Q5VT52 1461 aaKnown RBP13.48□□□□□ -0.25
SYNPO2L-201ENST00000372873 KIF21AQ7Z4S6 1674 aa13.48□□□□□ -0.25
SYNPO2L-201ENST00000372873 MAGI3Q5TCQ9 1506 aa13.48□□□□□ -0.25
SYNPO2L-201ENST00000372873 NUP153P49790 1475 aaKnown RBP13.48□□□□□ -0.25
SYNPO2L-201ENST00000372873 PATL2C9JE40 543 aaKnown RBP13.48□□□□□ -0.25
SYNPO2L-201ENST00000372873 SKIDA1Q1XH10 827 aa13.47□□□□□ -0.25
SYNPO2L-201ENST00000372873 TSR2Q969E8 191 aaKnown RBP13.47□□□□□ -0.25
SYNPO2L-201ENST00000372873 EXOSC9Q06265 439 aaKnown RBP13.47□□□□□ -0.25
SYNPO2L-201ENST00000372873 TOMM22Q9NS69 142 aa13.47□□□□□ -0.25
SYNPO2L-201ENST00000372873 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.46□□□□□ -0.25
SYNPO2L-201ENST00000372873 V9GYY5 206 aaPredicted RBP13.46□□□□□ -0.25
SYNPO2L-201ENST00000372873 SYNJ2O15056 1496 aa13.46□□□□□ -0.25
SYNPO2L-201ENST00000372873 ATF7IPQ6VMQ6 1270 aa13.46□□□□□ -0.25
SYNPO2L-201ENST00000372873 NOB1Q9ULX3 412 aaKnown RBP13.46□□□□□ -0.25
SYNPO2L-201ENST00000372873 PLEKHH1Q9ULM0 1364 aa13.46□□□□□ -0.25
SYNPO2L-201ENST00000372873 ZFP91Q96JP5 570 aaPredicted RBP13.46□□□□□ -0.26
SYNPO2L-201ENST00000372873 SMC3Q9UQE7 1217 aa13.46□□□□□ -0.26
SYNPO2L-201ENST00000372873 ATP2B3Q16720 1220 aa13.45□□□□□ -0.26
SYNPO2L-201ENST00000372873 JARID2Q92833 1246 aaPredicted RBP13.45□□□□□ -0.26
SYNPO2L-201ENST00000372873 TAOK2Q9UL54 1235 aa13.45□□□□□ -0.26
SYNPO2L-201ENST00000372873 PTPN14Q15678 1187 aa13.45□□□□□ -0.26
SYNPO2L-201ENST00000372873 UVSSAQ2YD98 709 aa13.45□□□□□ -0.26
SYNPO2L-201ENST00000372873 TBC1D9Q6ZT07 1266 aa13.45□□□□□ -0.26
SYNPO2L-201ENST00000372873 GCC1Q96CN9 775 aa13.45□□□□□ -0.26
SYNPO2L-201ENST00000372873 BICD2Q8TD16 824 aa13.45□□□□□ -0.26
SYNPO2L-201ENST00000372873 TMX1Q9H3N1 280 aa13.45□□□□□ -0.26
SYNPO2L-201ENST00000372873 TNNQ9UQP3 1299 aa13.45□□□□□ -0.26
SYNPO2L-201ENST00000372873 MCM2P49736 904 aa13.45□□□□□ -0.26
SYNPO2L-201ENST00000372873 C10orf67Q8IYJ2 551 aa13.45□□□□□ -0.26
SYNPO2L-201ENST00000372873 ABCA5Q8WWZ7 1642 aa13.45□□□□□ -0.26
SYNPO2L-201ENST00000372873 WDR33Q9C0J8 1336 aaKnown RBP13.44□□□□□ -0.26
SYNPO2L-201ENST00000372873 GPATCH8Q9UKJ3 1502 aaKnown RBP13.44□□□□□ -0.26
SYNPO2L-201ENST00000372873 CCDC183Q5T5S1 534 aa13.44□□□□□ -0.26
SYNPO2L-201ENST00000372873 HMMRO75330 724 aa13.44□□□□□ -0.26
SYNPO2L-201ENST00000372873 SRPK2P78362 688 aaKnown RBP13.44□□□□□ -0.26
SYNPO2L-201ENST00000372873 BMS1Q14692 1282 aaKnown RBP13.44□□□□□ -0.26
SYNPO2L-201ENST00000372873 TMCO3Q6UWJ1 677 aa13.44□□□□□ -0.26
SYNPO2L-201ENST00000372873 RLBP1P12271 317 aa13.43□□□□□ -0.26
SYNPO2L-201ENST00000372873 SPINK5Q9NQ38 1064 aaPredicted RBP13.43□□□□□ -0.26
SYNPO2L-201ENST00000372873 ARHGAP5Q13017 1502 aa13.43□□□□□ -0.26
SYNPO2L-201ENST00000372873 FILIP1Q7Z7B0 1213 aa13.43□□□□□ -0.26
SYNPO2L-201ENST00000372873 BMP2KLQ5H9B9 411 aa13.43□□□□□ -0.26
SYNPO2L-201ENST00000372873 RASSF4Q9H2L5 321 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms