RNA–Protein interactions for RNA: ENST00000372633.1

RAB40A-202, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 BASIC

Gene RAB40A, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-202ENST00000372633 ARHGEF28Q8N1W1 1705 aaKnown RBP17.26■□□□□ 0.35
RAB40A-202ENST00000372633 TRIM35Q9UPQ4 493 aa17.26■□□□□ 0.35
RAB40A-202ENST00000372633 COL3A1P02461 1466 aaPredicted RBP17.26■□□□□ 0.35
RAB40A-202ENST00000372633 ABCC11Q96J66 1382 aa17.26■□□□□ 0.35
RAB40A-202ENST00000372633 GRPEL1Q9HAV7 217 aa17.25■□□□□ 0.35
RAB40A-202ENST00000372633 CIZ1Q9ULV3 898 aaPredicted RBP17.25■□□□□ 0.35
RAB40A-202ENST00000372633 GLI2P10070 1586 aa17.25■□□□□ 0.35
RAB40A-202ENST00000372633 RPGRIP1LQ68CZ1 1315 aa17.25■□□□□ 0.35
RAB40A-202ENST00000372633 PNNQ9H307 717 aaKnown RBP17.25■□□□□ 0.35
RAB40A-202ENST00000372633 TMPOP42166 694 aaKnown RBP17.24■□□□□ 0.35
RAB40A-202ENST00000372633 ITPRIPQ8IWB1 547 aa17.24■□□□□ 0.35
RAB40A-202ENST00000372633 NUCB1Q02818 461 aa17.24■□□□□ 0.35
RAB40A-202ENST00000372633 EVC2Q86UK5 1308 aa17.23■□□□□ 0.35
RAB40A-202ENST00000372633 ARXQ96QS3 562 aa17.23■□□□□ 0.35
RAB40A-202ENST00000372633 NOB1Q9ULX3 412 aaKnown RBP17.23■□□□□ 0.35
RAB40A-202ENST00000372633 NPATQ14207 1427 aa17.22■□□□□ 0.35
RAB40A-202ENST00000372633 TMEM132EQ6IEE7 984 aa17.22■□□□□ 0.35
RAB40A-202ENST00000372633 TMEM57Q8N5G2 664 aa17.22■□□□□ 0.35
RAB40A-202ENST00000372633 ANKRD26Q9UPS8 1709 aa17.21■□□□□ 0.35
RAB40A-202ENST00000372633 CFAP74Q9C0B2 1584 aa17.21■□□□□ 0.35
RAB40A-202ENST00000372633 KIF16BQ96L93 1317 aa17.21■□□□□ 0.35
RAB40A-202ENST00000372633 TNPO1Q92973 898 aaKnown RBP17.2■□□□□ 0.34
RAB40A-202ENST00000372633 RAB3GAP1Q15042 981 aa17.2■□□□□ 0.34
RAB40A-202ENST00000372633 IPO8O15397 1037 aaKnown RBP17.19■□□□□ 0.34
RAB40A-202ENST00000372633 MED14O60244 1454 aa17.19■□□□□ 0.34
RAB40A-202ENST00000372633 BMP2KLQ5H9B9 411 aa17.19■□□□□ 0.34
RAB40A-202ENST00000372633 ALDH1L2Q3SY69 923 aa17.19■□□□□ 0.34
RAB40A-202ENST00000372633 KIF2CQ99661 725 aa17.19■□□□□ 0.34
RAB40A-202ENST00000372633 BRPF1P55201 1214 aaPredicted RBP17.18■□□□□ 0.34
RAB40A-202ENST00000372633 CFAP65Q6ZU64 1925 aaKnown RBP17.18■□□□□ 0.34
RAB40A-202ENST00000372633 PTMSP20962 102 aa17.18■□□□□ 0.34
RAB40A-202ENST00000372633 SKOR2Q2VWA4 1001 aaPredicted RBP17.18■□□□□ 0.34
RAB40A-202ENST00000372633 CHD1LQ86WJ1 897 aa17.18■□□□□ 0.34
RAB40A-202ENST00000372633 ESPNB1AK53 854 aa17.17■□□□□ 0.34
RAB40A-202ENST00000372633 CHGAP10645 457 aaKnown RBP17.17■□□□□ 0.34
RAB40A-202ENST00000372633 NAP1L5Q96NT1 182 aaPredicted RBP17.17■□□□□ 0.34
RAB40A-202ENST00000372633 GBP4Q96PP9 640 aa17.17■□□□□ 0.34
RAB40A-202ENST00000372633 PIK3C2BO00750 1634 aa17.17■□□□□ 0.34
RAB40A-202ENST00000372633 A0A1W2PP64 1363 aa17.16■□□□□ 0.34
RAB40A-202ENST00000372633 HECW2Q9P2P5 1572 aa17.16■□□□□ 0.34
RAB40A-202ENST00000372633 CAMSAP1Q5T5Y3 1602 aa17.16■□□□□ 0.34
RAB40A-202ENST00000372633 LNPKQ9C0E8 428 aa17.15■□□□□ 0.34
RAB40A-202ENST00000372633 ERBB4Q15303 1308 aa17.15■□□□□ 0.34
RAB40A-202ENST00000372633 GAS2L3Q86XJ1 694 aa17.15■□□□□ 0.34
RAB40A-202ENST00000372633 PPIP5K1Q6PFW1 1433 aa17.15■□□□□ 0.34
RAB40A-202ENST00000372633 NEXMIFQ5QGS0 1516 aa17.14■□□□□ 0.34
RAB40A-202ENST00000372633 CLEC17AQ6ZS10 378 aa17.14■□□□□ 0.34
RAB40A-202ENST00000372633 ZNF428Q96B54 188 aa17.14■□□□□ 0.34
RAB40A-202ENST00000372633 PNPLA6Q8IY17 1366 aa17.14■□□□□ 0.33
RAB40A-202ENST00000372633 REREQ9P2R6 1566 aa17.14■□□□□ 0.33
RAB40A-202ENST00000372633 U2SURPO15042 1029 aaKnown RBP17.14■□□□□ 0.33
RAB40A-202ENST00000372633 FRMPD1Q5SYB0 1578 aa17.14■□□□□ 0.33
RAB40A-202ENST00000372633 CDC42BPGQ6DT37 1551 aa17.14■□□□□ 0.33
RAB40A-202ENST00000372633 RIPK4P57078 832 aa17.14■□□□□ 0.33
RAB40A-202ENST00000372633 HSP90AB1P08238 724 aaKnown RBP17.13■□□□□ 0.33
RAB40A-202ENST00000372633 CABP2Q9NPB3 220 aa17.13■□□□□ 0.33
RAB40A-202ENST00000372633 GCC1Q96CN9 775 aa17.13■□□□□ 0.33
RAB40A-202ENST00000372633 PIK3R4Q99570 1358 aa17.13■□□□□ 0.33
RAB40A-202ENST00000372633 RRP9O43818 475 aaKnown RBP17.12■□□□□ 0.33
RAB40A-202ENST00000372633 ARHGAP31Q2M1Z3 1444 aa17.12■□□□□ 0.33
RAB40A-202ENST00000372633 SIGLEC1Q9BZZ2 1709 aa17.11■□□□□ 0.33
RAB40A-202ENST00000372633 ABCC3O15438 1527 aa17.11■□□□□ 0.33
RAB40A-202ENST00000372633 ZBTB7BO15156 539 aaPredicted RBP17.11■□□□□ 0.33
RAB40A-202ENST00000372633 HSP90AA1P07900 732 aaKnown RBP17.11■□□□□ 0.33
RAB40A-202ENST00000372633 CLTCQ00610 1675 aaKnown RBP17.11■□□□□ 0.33
RAB40A-202ENST00000372633 VGFO15240 615 aaPredicted RBP17.11■□□□□ 0.33
RAB40A-202ENST00000372633 CD163L1Q9NR16 1453 aa17.1■□□□□ 0.33
RAB40A-202ENST00000372633 IBTKQ9P2D0 1353 aaPredicted RBP17.1■□□□□ 0.33
RAB40A-202ENST00000372633 K7ELQ4 463 aaPredicted RBP17.1■□□□□ 0.33
RAB40A-202ENST00000372633 CD2BP2O95400 341 aaKnown RBP17.1■□□□□ 0.33
RAB40A-202ENST00000372633 FYB1O15117 783 aa17.1■□□□□ 0.33
RAB40A-202ENST00000372633 ARHGAP45Q92619 1136 aa17.1■□□□□ 0.33
RAB40A-202ENST00000372633 GGNBP2Q9H3C7 697 aa17.1■□□□□ 0.33
RAB40A-202ENST00000372633 CHMP4BQ9H444 224 aaKnown RBP17.1■□□□□ 0.33
RAB40A-202ENST00000372633 PTCH1Q13635 1447 aa17.1■□□□□ 0.33
RAB40A-202ENST00000372633 TBC1D9Q6ZT07 1266 aa17.09■□□□□ 0.33
RAB40A-202ENST00000372633 ZFYVE9O95405 1425 aa17.08■□□□□ 0.33
RAB40A-202ENST00000372633 MLH3Q9UHC1 1453 aa17.08■□□□□ 0.33
RAB40A-202ENST00000372633 GLIPR1L2Q4G1C9 344 aa17.08■□□□□ 0.33
RAB40A-202ENST00000372633 TRIM44Q96DX7 344 aaPredicted RBP17.08■□□□□ 0.33
RAB40A-202ENST00000372633 DIAPH1O60610 1272 aaKnown RBP17.08■□□□□ 0.32
RAB40A-202ENST00000372633 PPP1R9BQ96SB3 815 aa17.08■□□□□ 0.32
RAB40A-202ENST00000372633 LRRC7Q96NW7 1537 aa17.08■□□□□ 0.32
RAB40A-202ENST00000372633 ATAD2Q6PL18 1390 aa17.07■□□□□ 0.32
RAB40A-202ENST00000372633 FCHSD2O94868 740 aa17.07■□□□□ 0.32
RAB40A-202ENST00000372633 HSP90AA2PQ14568 343 aaPredicted RBP17.07■□□□□ 0.32
RAB40A-202ENST00000372633 ANKRD45Q5TZF3 282 aa17.07■□□□□ 0.32
RAB40A-202ENST00000372633 FAM135BQ49AJ0 1406 aa17.06■□□□□ 0.32
RAB40A-202ENST00000372633 KIF20BQ96Q89 1820 aa17.06■□□□□ 0.32
RAB40A-202ENST00000372633 PTPRMP28827 1452 aa17.06■□□□□ 0.32
RAB40A-202ENST00000372633 CCDC173Q0VFZ6 552 aa17.05■□□□□ 0.32
RAB40A-202ENST00000372633 TERF2IPQ9NYB0 399 aa17.05■□□□□ 0.32
RAB40A-202ENST00000372633 KLHL40Q2TBA0 621 aa17.05■□□□□ 0.32
RAB40A-202ENST00000372633 SIRT2Q8IXJ6 389 aa17.05■□□□□ 0.32
RAB40A-202ENST00000372633 MRPL50Q8N5N7 158 aaKnown RBP17.05■□□□□ 0.32
RAB40A-202ENST00000372633 ASXL2Q76L83 1435 aa17.05■□□□□ 0.32
RAB40A-202ENST00000372633 VAMP4O75379 141 aa17.05■□□□□ 0.32
RAB40A-202ENST00000372633 GAS2L2Q8NHY3 880 aa17.05■□□□□ 0.32
RAB40A-202ENST00000372633 POGZQ7Z3K3 1410 aa17.04■□□□□ 0.32
RAB40A-202ENST00000372633 ABCC4O15439 1325 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms