RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 HMOX1P09601 288 aa12.54□□□□□ -0.4
KDM4A-201ENST00000372396 ATF3P18847 181 aa12.54□□□□□ -0.4
KDM4A-201ENST00000372396 AMOTL2Q9Y2J4 779 aa12.54□□□□□ -0.4
KDM4A-201ENST00000372396 KIF1BO60333 1816 aa12.54□□□□□ -0.4
KDM4A-201ENST00000372396 ARHGAP31Q2M1Z3 1444 aa12.53□□□□□ -0.4
KDM4A-201ENST00000372396 PIK3C2GO75747 1445 aa12.53□□□□□ -0.4
KDM4A-201ENST00000372396 PRKAR2BP31323 418 aa12.53□□□□□ -0.4
KDM4A-201ENST00000372396 NCBP3Q53F19 620 aaKnown RBP12.53□□□□□ -0.4
KDM4A-201ENST00000372396 CASC1Q6TDU7 716 aa12.53□□□□□ -0.4
KDM4A-201ENST00000372396 FCHSD2O94868 740 aa12.52□□□□□ -0.4
KDM4A-201ENST00000372396 CT47B1P0C2W7 299 aaPredicted RBP12.52□□□□□ -0.4
KDM4A-201ENST00000372396 PROSER2Q86WR7 435 aaPredicted RBP12.52□□□□□ -0.4
KDM4A-201ENST00000372396 LRPPRCP42704 1394 aaKnown RBP12.52□□□□□ -0.4
KDM4A-201ENST00000372396 IPO4Q8TEX9 1081 aaKnown RBP12.52□□□□□ -0.4
KDM4A-201ENST00000372396 KIF16BQ96L93 1317 aa12.52□□□□□ -0.41
KDM4A-201ENST00000372396 MSNP26038 577 aaKnown RBP12.51□□□□□ -0.41
KDM4A-201ENST00000372396 LMTK2Q8IWU2 1503 aa12.51□□□□□ -0.41
KDM4A-201ENST00000372396 SPHKAPQ2M3C7 1700 aa12.51□□□□□ -0.41
KDM4A-201ENST00000372396 ABTB2Q8N961 1025 aa12.51□□□□□ -0.41
KDM4A-201ENST00000372396 CFAP44Q96MT7 982 aa12.51□□□□□ -0.41
KDM4A-201ENST00000372396 BCL2L13Q9BXK5 485 aa12.51□□□□□ -0.41
KDM4A-201ENST00000372396 SLFN5Q08AF3 891 aa12.51□□□□□ -0.41
KDM4A-201ENST00000372396 UGGT1Q9NYU2 1555 aa12.51□□□□□ -0.41
KDM4A-201ENST00000372396 MTERF4Q7Z6M4 381 aaKnown RBP12.51□□□□□ -0.41
KDM4A-201ENST00000372396 CLTCL1P53675 1640 aa12.5□□□□□ -0.41
KDM4A-201ENST00000372396 ESCO1Q5FWF5 840 aa12.5□□□□□ -0.41
KDM4A-201ENST00000372396 DZIP1LQ8IYY4 767 aaKnown RBP12.5□□□□□ -0.41
KDM4A-201ENST00000372396 POLR3AO14802 1390 aaPredicted RBP12.5□□□□□ -0.41
KDM4A-201ENST00000372396 DDX19BQ9UMR2 479 aa12.5□□□□□ -0.41
KDM4A-201ENST00000372396 COG6Q9Y2V7 657 aa12.5□□□□□ -0.41
KDM4A-201ENST00000372396 WWC1Q8IX03 1113 aa12.49□□□□□ -0.41
KDM4A-201ENST00000372396 API5Q9BZZ5 524 aaKnown RBP12.49□□□□□ -0.41
KDM4A-201ENST00000372396 PDE3AQ14432 1141 aa12.49□□□□□ -0.41
KDM4A-201ENST00000372396 PLCD3Q8N3E9 789 aa12.49□□□□□ -0.41
KDM4A-201ENST00000372396 GZF1Q9H116 711 aaPredicted RBP12.49□□□□□ -0.41
KDM4A-201ENST00000372396 ABCC11Q96J66 1382 aa12.48□□□□□ -0.41
KDM4A-201ENST00000372396 TSPOAP1O95153 1857 aa12.48□□□□□ -0.41
KDM4A-201ENST00000372396 BRD2P25440 801 aaKnown RBP12.48□□□□□ -0.41
KDM4A-201ENST00000372396 C1orf141Q5JVX7 400 aa12.48□□□□□ -0.41
KDM4A-201ENST00000372396 GAS2L2Q8NHY3 880 aa12.48□□□□□ -0.41
KDM4A-201ENST00000372396 INSRP06213 1382 aa12.48□□□□□ -0.41
KDM4A-201ENST00000372396 CFAP65Q6ZU64 1925 aaKnown RBP12.48□□□□□ -0.41
KDM4A-201ENST00000372396 A0A0G2JS52 829 aa12.48□□□□□ -0.41
KDM4A-201ENST00000372396 TRPM1Q7Z4N2 1603 aa12.48□□□□□ -0.41
KDM4A-201ENST00000372396 RNF17Q9BXT8 1623 aaKnown RBP12.48□□□□□ -0.41
KDM4A-201ENST00000372396 KDM5AP29375 1690 aaKnown RBP12.48□□□□□ -0.41
KDM4A-201ENST00000372396 ERVK-7P63135 1459 aa12.48□□□□□ -0.41
KDM4A-201ENST00000372396 E9PCH4 1651 aa12.47□□□□□ -0.41
KDM4A-201ENST00000372396 CARD14Q9BXL6 1004 aa12.47□□□□□ -0.41
KDM4A-201ENST00000372396 HDAC5Q9UQL6 1122 aa12.47□□□□□ -0.41
KDM4A-201ENST00000372396 NME9Q86XW9 330 aa12.47□□□□□ -0.41
KDM4A-201ENST00000372396 ELL2O00472 640 aaPredicted RBP12.47□□□□□ -0.41
KDM4A-201ENST00000372396 HMMRO75330 724 aa12.47□□□□□ -0.41
KDM4A-201ENST00000372396 RIMBP3CA6NJZ7 1639 aa12.46□□□□□ -0.41
KDM4A-201ENST00000372396 RIMBP3BA6NNM3 1639 aa12.46□□□□□ -0.41
KDM4A-201ENST00000372396 RIMBP3Q9UFD9 1639 aa12.46□□□□□ -0.41
KDM4A-201ENST00000372396 TMPOP42166 694 aaKnown RBP12.46□□□□□ -0.41
KDM4A-201ENST00000372396 KIAA1211Q6ZU35 1233 aa12.46□□□□□ -0.41
KDM4A-201ENST00000372396 ESPNB1AK53 854 aa12.46□□□□□ -0.42
KDM4A-201ENST00000372396 TEFQ10587 303 aa12.46□□□□□ -0.42
KDM4A-201ENST00000372396 NUTM2GQ5VZR2 741 aa12.46□□□□□ -0.42
KDM4A-201ENST00000372396 PPIP5K1Q6PFW1 1433 aa12.46□□□□□ -0.42
KDM4A-201ENST00000372396 MAP3K4Q9Y6R4 1608 aa12.45□□□□□ -0.42
KDM4A-201ENST00000372396 TBX22Q9Y458 520 aa12.45□□□□□ -0.42
KDM4A-201ENST00000372396 FYB1O15117 783 aa12.45□□□□□ -0.42
KDM4A-201ENST00000372396 GLI2P10070 1586 aa12.45□□□□□ -0.42
KDM4A-201ENST00000372396 RRS1Q15050 365 aaKnown RBP12.45□□□□□ -0.42
KDM4A-201ENST00000372396 NFE2L2Q16236 605 aa12.45□□□□□ -0.42
KDM4A-201ENST00000372396 BACH2Q9BYV9 841 aa12.45□□□□□ -0.42
KDM4A-201ENST00000372396 TMEM2Q9UHN6 1383 aa12.45□□□□□ -0.42
KDM4A-201ENST00000372396 ZFYVE9O95405 1425 aa12.45□□□□□ -0.42
KDM4A-201ENST00000372396 EXOSC9Q06265 439 aaKnown RBP12.45□□□□□ -0.42
KDM4A-201ENST00000372396 SULT6B1Q6IMI4 303 aa12.45□□□□□ -0.42
KDM4A-201ENST00000372396 SMAP1Q8IYB5 467 aaPredicted RBP12.45□□□□□ -0.42
KDM4A-201ENST00000372396 PRDM10Q9NQV6 1147 aa12.45□□□□□ -0.42
KDM4A-201ENST00000372396 SYNMO15061 1565 aa12.44□□□□□ -0.42
KDM4A-201ENST00000372396 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.44□□□□□ -0.42
KDM4A-201ENST00000372396 SIRT1Q96EB6 747 aa12.44□□□□□ -0.42
KDM4A-201ENST00000372396 NKTRP30414 1462 aaKnown RBP12.44□□□□□ -0.42
KDM4A-201ENST00000372396 OS9Q13438 667 aaPredicted RBP12.44□□□□□ -0.42
KDM4A-201ENST00000372396 ZNF428Q96B54 188 aa12.44□□□□□ -0.42
KDM4A-201ENST00000372396 A0A1W2PP64 1363 aa12.44□□□□□ -0.42
KDM4A-201ENST00000372396 TSPYL4Q9UJ04 414 aa12.43□□□□□ -0.42
KDM4A-201ENST00000372396 TTC21AQ8NDW8 1320 aa12.43□□□□□ -0.42
KDM4A-201ENST00000372396 DIP2CQ9Y2E4 1556 aa12.43□□□□□ -0.42
KDM4A-201ENST00000372396 KIDINS220Q9ULH0 1771 aa12.42□□□□□ -0.42
KDM4A-201ENST00000372396 ACEP12821 1306 aa12.42□□□□□ -0.42
KDM4A-201ENST00000372396 PHF8Q9UPP1 1060 aa12.42□□□□□ -0.42
KDM4A-201ENST00000372396 MADDQ8WXG6 1647 aa12.42□□□□□ -0.42
KDM4A-201ENST00000372396 ADGRB3O60242 1522 aa12.42□□□□□ -0.42
KDM4A-201ENST00000372396 SLC4A10Q6U841 1118 aa12.42□□□□□ -0.42
KDM4A-201ENST00000372396 KCNH5Q8NCM2 988 aa12.42□□□□□ -0.42
KDM4A-201ENST00000372396 PANK1Q8TE04 598 aa12.42□□□□□ -0.42
KDM4A-201ENST00000372396 LAMC1P11047 1609 aa12.42□□□□□ -0.42
KDM4A-201ENST00000372396 APPP05067 770 aa12.41□□□□□ -0.42
KDM4A-201ENST00000372396 DHX37Q8IY37 1157 aaKnown RBP12.41□□□□□ -0.42
KDM4A-201ENST00000372396 DUSP27Q5VZP5 1158 aa12.41□□□□□ -0.42
KDM4A-201ENST00000372396 EMILIN1Q9Y6C2 1016 aa12.41□□□□□ -0.42
KDM4A-201ENST00000372396 CEP152O94986 1710 aa12.41□□□□□ -0.42
KDM4A-201ENST00000372396 TTC21BQ7Z4L5 1316 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms