RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 SPATA31A3Q5VYP0 1347 aa22.57■■□□□ 1.2
TMEM53-203ENST00000372242 SBNO1A3KN83 1393 aa22.57■■□□□ 1.2
TMEM53-203ENST00000372242 TNS3Q68CZ2 1445 aa22.56■■□□□ 1.2
TMEM53-203ENST00000372242 SSH2Q76I76 1423 aa22.56■■□□□ 1.2
TMEM53-203ENST00000372242 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.56■■□□□ 1.2
TMEM53-203ENST00000372242 CARD14Q9BXL6 1004 aa22.56■■□□□ 1.2
TMEM53-203ENST00000372242 PANK3Q9H999 370 aa22.56■■□□□ 1.2
TMEM53-203ENST00000372242 NRKQ7Z2Y5 1582 aa22.55■■□□□ 1.2
TMEM53-203ENST00000372242 TTC21BQ7Z4L5 1316 aa22.55■■□□□ 1.2
TMEM53-203ENST00000372242 PLEKHG5O94827 1062 aa22.54■■□□□ 1.2
TMEM53-203ENST00000372242 NUTM2GQ5VZR2 741 aa22.54■■□□□ 1.2
TMEM53-203ENST00000372242 EDC4Q6P2E9 1401 aaKnown RBP22.53■■□□□ 1.2
TMEM53-203ENST00000372242 ALS2Q96Q42 1657 aa22.53■■□□□ 1.2
TMEM53-203ENST00000372242 ZNF316A6NFI3 1004 aaPredicted RBP22.53■■□□□ 1.2
TMEM53-203ENST00000372242 ABTB2Q8N961 1025 aa22.52■■□□□ 1.2
TMEM53-203ENST00000372242 PNPLA6Q8IY17 1366 aa22.52■■□□□ 1.2
TMEM53-203ENST00000372242 JCADQ9P266 1359 aa22.52■■□□□ 1.2
TMEM53-203ENST00000372242 BRD4O60885 1362 aaPredicted RBP22.51■■□□□ 1.19
TMEM53-203ENST00000372242 NSD3Q9BZ95 1437 aa22.51■■□□□ 1.19
TMEM53-203ENST00000372242 NME9Q86XW9 330 aa22.5■■□□□ 1.19
TMEM53-203ENST00000372242 ARHGEF10O15013 1369 aa22.49■■□□□ 1.19
TMEM53-203ENST00000372242 PIK3C2AO00443 1686 aa22.49■■□□□ 1.19
TMEM53-203ENST00000372242 SHPRHQ149N8 1683 aa22.49■■□□□ 1.19
TMEM53-203ENST00000372242 TTC21AQ8NDW8 1320 aa22.49■■□□□ 1.19
TMEM53-203ENST00000372242 CABLES1Q8TDN4 633 aa22.48■■□□□ 1.19
TMEM53-203ENST00000372242 ZRANB1Q9UGI0 708 aa22.48■■□□□ 1.19
TMEM53-203ENST00000372242 NLRP6P59044 892 aa22.47■■□□□ 1.19
TMEM53-203ENST00000372242 DDX10Q13206 875 aaKnown RBP22.46■■□□□ 1.19
TMEM53-203ENST00000372242 COL22A1Q8NFW1 1626 aaPredicted RBP22.45■■□□□ 1.18
TMEM53-203ENST00000372242 NUTM2BA6NNL0 878 aaPredicted RBP22.45■■□□□ 1.18
TMEM53-203ENST00000372242 NUTM2EB1AL46 878 aaPredicted RBP22.45■■□□□ 1.18
TMEM53-203ENST00000372242 NUTM2AQ8IVF1 878 aaPredicted RBP22.45■■□□□ 1.18
TMEM53-203ENST00000372242 FYB1O15117 783 aa22.44■■□□□ 1.18
TMEM53-203ENST00000372242 NLRP13Q86W25 1043 aa22.43■■□□□ 1.18
TMEM53-203ENST00000372242 GGNBP2Q9H3C7 697 aa22.43■■□□□ 1.18
TMEM53-203ENST00000372242 PER1O15534 1290 aaPredicted RBP22.43■■□□□ 1.18
TMEM53-203ENST00000372242 KNSTRNQ9Y448 316 aa22.43■■□□□ 1.18
TMEM53-203ENST00000372242 MED1Q15648 1581 aaPredicted RBP22.42■■□□□ 1.18
TMEM53-203ENST00000372242 CGNL1Q0VF96 1302 aa22.41■■□□□ 1.18
TMEM53-203ENST00000372242 SPATA31A6Q5VVP1 1343 aa22.41■■□□□ 1.18
TMEM53-203ENST00000372242 MARF1Q9Y4F3 1742 aaKnown RBP22.41■■□□□ 1.18
TMEM53-203ENST00000372242 HAP1P54257 671 aaPredicted RBP22.41■■□□□ 1.18
TMEM53-203ENST00000372242 KIF20BQ96Q89 1820 aa22.4■■□□□ 1.18
TMEM53-203ENST00000372242 ABCA3Q99758 1704 aa22.4■■□□□ 1.18
TMEM53-203ENST00000372242 CRYBG1Q9Y4K1 1723 aa22.4■■□□□ 1.18
TMEM53-203ENST00000372242 USP31Q70CQ4 1352 aa22.39■■□□□ 1.17
TMEM53-203ENST00000372242 USP19O94966 1318 aa22.39■■□□□ 1.17
TMEM53-203ENST00000372242 SOX12O15370 315 aa22.38■■□□□ 1.17
TMEM53-203ENST00000372242 LRP6O75581 1613 aa22.38■■□□□ 1.17
TMEM53-203ENST00000372242 ADAMTS2O95450 1211 aa22.38■■□□□ 1.17
TMEM53-203ENST00000372242 CNGB1Q14028 1251 aaPredicted RBP22.38■■□□□ 1.17
TMEM53-203ENST00000372242 COG3Q96JB2 828 aa22.38■■□□□ 1.17
TMEM53-203ENST00000372242 PHRF1Q9P1Y6 1649 aaKnown RBP22.38■■□□□ 1.17
TMEM53-203ENST00000372242 OVOS2A0A0J9YW53 1432 aa22.37■■□□□ 1.17
TMEM53-203ENST00000372242 OVOS2Q6IE36 1432 aa22.37■■□□□ 1.17
TMEM53-203ENST00000372242 GCP02774 474 aa22.36■■□□□ 1.17
TMEM53-203ENST00000372242 AMER1Q5JTC6 1135 aaPredicted RBP22.36■■□□□ 1.17
TMEM53-203ENST00000372242 USP54Q70EL1 1684 aa22.35■■□□□ 1.17
TMEM53-203ENST00000372242 ZC3H6P61129 1189 aaKnown RBP22.34■■□□□ 1.17
TMEM53-203ENST00000372242 SLIT3O75094 1523 aa22.34■■□□□ 1.17
TMEM53-203ENST00000372242 CC2D1BQ5T0F9 858 aaKnown RBP22.34■■□□□ 1.17
TMEM53-203ENST00000372242 FBLN1P23142 703 aa22.33■■□□□ 1.16
TMEM53-203ENST00000372242 MEX3CQ5U5Q3 659 aaKnown RBP22.31■■□□□ 1.16
TMEM53-203ENST00000372242 KCNH5Q8NCM2 988 aa22.31■■□□□ 1.16
TMEM53-203ENST00000372242 ANKRD26Q9UPS8 1709 aa22.3■■□□□ 1.16
TMEM53-203ENST00000372242 ZBTB7CA1YPR0 619 aa22.3■■□□□ 1.16
TMEM53-203ENST00000372242 TNNT2P45379 298 aaPredicted RBP22.3■■□□□ 1.16
TMEM53-203ENST00000372242 NSD2O96028 1365 aa22.3■■□□□ 1.16
TMEM53-203ENST00000372242 KIAA0232Q92628 1395 aa22.3■■□□□ 1.16
TMEM53-203ENST00000372242 NFAT5O94916 1531 aa22.3■■□□□ 1.16
TMEM53-203ENST00000372242 C8orf37Q96NL8 207 aa22.29■■□□□ 1.16
TMEM53-203ENST00000372242 FAM83GA6ND36 823 aa22.28■■□□□ 1.16
TMEM53-203ENST00000372242 CHRNA2Q15822 529 aa22.28■■□□□ 1.16
TMEM53-203ENST00000372242 MORC1Q86VD1 984 aa22.28■■□□□ 1.16
TMEM53-203ENST00000372242 PRDM11Q9NQV5 511 aa22.28■■□□□ 1.16
TMEM53-203ENST00000372242 NPC1L1Q9UHC9 1359 aa22.26■■□□□ 1.15
TMEM53-203ENST00000372242 RRS1Q15050 365 aaKnown RBP22.25■■□□□ 1.15
TMEM53-203ENST00000372242 ARHGEF25Q86VW2 580 aa22.25■■□□□ 1.15
TMEM53-203ENST00000372242 NGLY1Q96IV0 654 aa22.25■■□□□ 1.15
TMEM53-203ENST00000372242 CPDO75976 1380 aa22.25■■□□□ 1.15
TMEM53-203ENST00000372242 LTN1O94822 1766 aa22.23■■□□□ 1.15
TMEM53-203ENST00000372242 MAP3K19Q56UN5 1328 aa22.22■■□□□ 1.15
TMEM53-203ENST00000372242 COL14A1Q05707 1796 aaKnown RBP22.21■■□□□ 1.15
TMEM53-203ENST00000372242 EMILIN1Q9Y6C2 1016 aa22.2■■□□□ 1.14
TMEM53-203ENST00000372242 AFF2P51816 1311 aa22.2■■□□□ 1.14
TMEM53-203ENST00000372242 PLCH1Q4KWH8 1693 aa22.2■■□□□ 1.14
TMEM53-203ENST00000372242 BTG4Q9NY30 223 aa22.2■■□□□ 1.14
TMEM53-203ENST00000372242 AXIN2Q9Y2T1 843 aa22.2■■□□□ 1.14
TMEM53-203ENST00000372242 MAP2P11137 1827 aaKnown RBP22.19■■□□□ 1.14
TMEM53-203ENST00000372242 PPM1GO15355 546 aaPredicted RBP22.19■■□□□ 1.14
TMEM53-203ENST00000372242 AATKQ6ZMQ8 1374 aa22.19■■□□□ 1.14
TMEM53-203ENST00000372242 POLKQ9UBT6 870 aa22.18■■□□□ 1.14
TMEM53-203ENST00000372242 COL18A1P39060 1754 aa22.18■■□□□ 1.14
TMEM53-203ENST00000372242 CAMTA1Q9Y6Y1 1673 aa22.18■■□□□ 1.14
TMEM53-203ENST00000372242 AMPHP49418 695 aa22.17■■□□□ 1.14
TMEM53-203ENST00000372242 FNBP4Q8N3X1 1017 aaPredicted RBP22.17■■□□□ 1.14
TMEM53-203ENST00000372242 SLIT2O94813 1529 aa22.17■■□□□ 1.14
TMEM53-203ENST00000372242 LMO7Q8WWI1 1683 aa22.17■■□□□ 1.14
TMEM53-203ENST00000372242 RGPD5Q99666 1765 aa22.16■■□□□ 1.14
TMEM53-203ENST00000372242 PEAK1Q9H792 1746 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms