RNA–Protein interactions for RNA: ENST00000372108.9

GTF3C5-204, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-204ENST00000372108 ZRANB1Q9UGI0 708 aa20.64■□□□□ 0.89
GTF3C5-204ENST00000372108 COL3A1P02461 1466 aaPredicted RBP20.63■□□□□ 0.89
GTF3C5-204ENST00000372108 IRX6P78412 446 aaPredicted RBP20.62■□□□□ 0.89
GTF3C5-204ENST00000372108 FBLN1P23142 703 aa20.62■□□□□ 0.89
GTF3C5-204ENST00000372108 NRKQ7Z2Y5 1582 aa20.61■□□□□ 0.89
GTF3C5-204ENST00000372108 PNPLA6Q8IY17 1366 aa20.61■□□□□ 0.89
GTF3C5-204ENST00000372108 RGPD8O14715 1765 aaPredicted RBP20.61■□□□□ 0.89
GTF3C5-204ENST00000372108 USP6P35125 1406 aa20.61■□□□□ 0.89
GTF3C5-204ENST00000372108 TTC21BQ7Z4L5 1316 aa20.61■□□□□ 0.89
GTF3C5-204ENST00000372108 POLKQ9UBT6 870 aa20.6■□□□□ 0.89
GTF3C5-204ENST00000372108 RNF123Q5XPI4 1314 aa20.6■□□□□ 0.89
GTF3C5-204ENST00000372108 ANKARQ7Z5J8 1434 aa20.6■□□□□ 0.89
GTF3C5-204ENST00000372108 PMFBP1Q8TBY8 1022 aa20.59■□□□□ 0.89
GTF3C5-204ENST00000372108 RUNDC1Q96C34 613 aa20.59■□□□□ 0.89
GTF3C5-204ENST00000372108 COG3Q96JB2 828 aa20.59■□□□□ 0.89
GTF3C5-204ENST00000372108 FMN2Q9NZ56 1722 aa20.59■□□□□ 0.89
GTF3C5-204ENST00000372108 NALCNQ8IZF0 1738 aa20.59■□□□□ 0.89
GTF3C5-204ENST00000372108 SSH2Q76I76 1423 aa20.58■□□□□ 0.89
GTF3C5-204ENST00000372108 U2AF1L5P0DN76 240 aaPredicted RBP20.58■□□□□ 0.89
GTF3C5-204ENST00000372108 U2AF1Q01081 240 aaKnown RBP eCLIP20.58■□□□□ 0.89
GTF3C5-204ENST00000372108 RBM33Q96EV2 1170 aaKnown RBP20.58■□□□□ 0.89
GTF3C5-204ENST00000372108 NGEFQ8N5V2 710 aa20.57■□□□□ 0.88
GTF3C5-204ENST00000372108 AATKQ6ZMQ8 1374 aa20.57■□□□□ 0.88
GTF3C5-204ENST00000372108 MAP2P11137 1827 aaKnown RBP20.56■□□□□ 0.88
GTF3C5-204ENST00000372108 GOLGA2Q08379 1002 aa20.56■□□□□ 0.88
GTF3C5-204ENST00000372108 DIAPH1O60610 1272 aaKnown RBP20.55■□□□□ 0.88
GTF3C5-204ENST00000372108 PRKCSHP14314 528 aaPredicted RBP20.55■□□□□ 0.88
GTF3C5-204ENST00000372108 NGDNQ8NEJ9 315 aaKnown RBP20.55■□□□□ 0.88
GTF3C5-204ENST00000372108 IQSEC2Q5JU85 1478 aa20.55■□□□□ 0.88
GTF3C5-204ENST00000372108 KDM4FA0A1W2PPD8 638 aa20.54■□□□□ 0.88
GTF3C5-204ENST00000372108 U2SURPO15042 1029 aaKnown RBP20.54■□□□□ 0.88
GTF3C5-204ENST00000372108 PPM1GO15355 546 aaPredicted RBP20.54■□□□□ 0.88
GTF3C5-204ENST00000372108 TCP11L2Q8N4U5 519 aa20.54■□□□□ 0.88
GTF3C5-204ENST00000372108 RCAN3Q9UKA8 241 aa20.54■□□□□ 0.88
GTF3C5-204ENST00000372108 EMILIN1Q9Y6C2 1016 aa20.54■□□□□ 0.88
GTF3C5-204ENST00000372108 NWD1Q149M9 1564 aa20.54■□□□□ 0.88
GTF3C5-204ENST00000372108 ADGRL3Q9HAR2 1447 aa20.53■□□□□ 0.88
GTF3C5-204ENST00000372108 DUSP27Q5VZP5 1158 aa20.53■□□□□ 0.88
GTF3C5-204ENST00000372108 ERICH6BQ5W0A0 696 aa20.53■□□□□ 0.88
GTF3C5-204ENST00000372108 OVOS2A0A0J9YW53 1432 aa20.52■□□□□ 0.88
GTF3C5-204ENST00000372108 OVOS2Q6IE36 1432 aa20.52■□□□□ 0.88
GTF3C5-204ENST00000372108 SLFN5Q08AF3 891 aa20.52■□□□□ 0.88
GTF3C5-204ENST00000372108 TTC21AQ8NDW8 1320 aa20.51■□□□□ 0.87
GTF3C5-204ENST00000372108 WWC1Q8IX03 1113 aa20.51■□□□□ 0.87
GTF3C5-204ENST00000372108 TRMT2AQ8IZ69 625 aaKnown RBP20.51■□□□□ 0.87
GTF3C5-204ENST00000372108 RRS1Q15050 365 aaKnown RBP20.5■□□□□ 0.87
GTF3C5-204ENST00000372108 PLEKHF1Q96S99 279 aa20.5■□□□□ 0.87
GTF3C5-204ENST00000372108 SPINK5Q9NQ38 1064 aaPredicted RBP20.5■□□□□ 0.87
GTF3C5-204ENST00000372108 RRP7AQ9Y3A4 280 aaKnown RBP20.5■□□□□ 0.87
GTF3C5-204ENST00000372108 CDK12Q9NYV4 1490 aaPredicted RBP20.5■□□□□ 0.87
GTF3C5-204ENST00000372108 DMRT2Q9Y5R5 561 aa20.5■□□□□ 0.87
GTF3C5-204ENST00000372108 PHF23Q9BUL5 403 aaPredicted RBP20.49■□□□□ 0.87
GTF3C5-204ENST00000372108 NEUROD2Q15784 382 aa20.48■□□□□ 0.87
GTF3C5-204ENST00000372108 HSPA2P54652 639 aa20.48■□□□□ 0.87
GTF3C5-204ENST00000372108 USP31Q70CQ4 1352 aa20.47■□□□□ 0.87
GTF3C5-204ENST00000372108 NCBP3Q53F19 620 aaKnown RBP20.47■□□□□ 0.87
GTF3C5-204ENST00000372108 E9PSI1 815 aa20.46■□□□□ 0.87
GTF3C5-204ENST00000372108 IL13P35225 146 aa20.46■□□□□ 0.87
GTF3C5-204ENST00000372108 CCDC27Q2M243 656 aa20.46■□□□□ 0.87
GTF3C5-204ENST00000372108 C14orf37Q86TY3 774 aa20.46■□□□□ 0.87
GTF3C5-204ENST00000372108 PROSER2Q86WR7 435 aaPredicted RBP20.46■□□□□ 0.87
GTF3C5-204ENST00000372108 PHF8Q9UPP1 1060 aa20.46■□□□□ 0.87
GTF3C5-204ENST00000372108 RRP1P56182 461 aaKnown RBP20.45■□□□□ 0.86
GTF3C5-204ENST00000372108 PIK3C2AO00443 1686 aa20.44■□□□□ 0.86
GTF3C5-204ENST00000372108 FCHSD2O94868 740 aa20.44■□□□□ 0.86
GTF3C5-204ENST00000372108 RSPH6AQ9H0K4 717 aa20.42■□□□□ 0.86
GTF3C5-204ENST00000372108 PNNQ9H307 717 aaKnown RBP20.42■□□□□ 0.86
GTF3C5-204ENST00000372108 PPP4R2Q9NY27 417 aa20.42■□□□□ 0.86
GTF3C5-204ENST00000372108 ESCO1Q5FWF5 840 aa20.42■□□□□ 0.86
GTF3C5-204ENST00000372108 WDR63Q8IWG1 891 aa20.42■□□□□ 0.86
GTF3C5-204ENST00000372108 TMPOP42166 694 aaKnown RBP20.41■□□□□ 0.86
GTF3C5-204ENST00000372108 MAPK8IP3Q9UPT6 1336 aa20.41■□□□□ 0.86
GTF3C5-204ENST00000372108 LRRC7Q96NW7 1537 aa20.41■□□□□ 0.86
GTF3C5-204ENST00000372108 LMTK3Q96Q04 1460 aa20.4■□□□□ 0.86
GTF3C5-204ENST00000372108 STRCP1A6NGW2 1772 aa20.39■□□□□ 0.86
GTF3C5-204ENST00000372108 PEAK1Q9H792 1746 aa20.39■□□□□ 0.85
GTF3C5-204ENST00000372108 SOX12O15370 315 aa20.39■□□□□ 0.85
GTF3C5-204ENST00000372108 PRKAR2BP31323 418 aa20.39■□□□□ 0.85
GTF3C5-204ENST00000372108 NLRP6P59044 892 aa20.39■□□□□ 0.85
GTF3C5-204ENST00000372108 HMOX1P09601 288 aa20.38■□□□□ 0.85
GTF3C5-204ENST00000372108 C19orf44Q9H6X5 657 aa20.38■□□□□ 0.85
GTF3C5-204ENST00000372108 PAK3O75914 559 aaPredicted RBP20.38■□□□□ 0.85
GTF3C5-204ENST00000372108 TRIM35Q9UPQ4 493 aa20.38■□□□□ 0.85
GTF3C5-204ENST00000372108 ABTB2Q8N961 1025 aa20.37■□□□□ 0.85
GTF3C5-204ENST00000372108 ORAI2Q96SN7 254 aa20.37■□□□□ 0.85
GTF3C5-204ENST00000372108 MAP3K19Q56UN5 1328 aa20.37■□□□□ 0.85
GTF3C5-204ENST00000372108 MARF1Q9Y4F3 1742 aaKnown RBP20.37■□□□□ 0.85
GTF3C5-204ENST00000372108 USP54Q70EL1 1684 aa20.37■□□□□ 0.85
GTF3C5-204ENST00000372108 EIF4A2Q14240 407 aaKnown RBP20.36■□□□□ 0.85
GTF3C5-204ENST00000372108 NUTM2GQ5VZR2 741 aa20.36■□□□□ 0.85
GTF3C5-204ENST00000372108 HSP90AB2PQ58FF8 381 aa20.36■□□□□ 0.85
GTF3C5-204ENST00000372108 PSME1Q06323 249 aa20.35■□□□□ 0.85
GTF3C5-204ENST00000372108 PHACTR3Q96KR7 559 aa20.35■□□□□ 0.85
GTF3C5-204ENST00000372108 TMEM94Q12767 1356 aa20.35■□□□□ 0.85
GTF3C5-204ENST00000372108 PLIN1O60240 522 aa20.35■□□□□ 0.85
GTF3C5-204ENST00000372108 RIPK4P57078 832 aa20.35■□□□□ 0.85
GTF3C5-204ENST00000372108 STRCQ7RTU9 1775 aa20.33■□□□□ 0.85
GTF3C5-204ENST00000372108 SBNO1A3KN83 1393 aa20.33■□□□□ 0.84
GTF3C5-204ENST00000372108 C1orf167Q5SNV9 1468 aa20.33■□□□□ 0.84
GTF3C5-204ENST00000372108 NCOA3Q9Y6Q9 1424 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms