RNA–Protein interactions for RNA: ENST00000371747.7

TTC39A-203, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-203ENST00000371747 NUTM2FA1L443 756 aa30.06■■■□□ 2.4
TTC39A-203ENST00000371747 NGEFQ8N5V2 710 aa30.06■■■□□ 2.4
TTC39A-203ENST00000371747 NME9Q86XW9 330 aa30.06■■■□□ 2.4
TTC39A-203ENST00000371747 RUNDC1Q96C34 613 aa30.04■■■□□ 2.4
TTC39A-203ENST00000371747 GOLGA2Q08379 1002 aa30.04■■■□□ 2.4
TTC39A-203ENST00000371747 RCAN3Q9UKA8 241 aa30.04■■■□□ 2.4
TTC39A-203ENST00000371747 ACEP12821 1306 aa30.03■■■□□ 2.4
TTC39A-203ENST00000371747 NKTRP30414 1462 aaKnown RBP30.02■■■□□ 2.4
TTC39A-203ENST00000371747 LMTK3Q96Q04 1460 aa30.02■■■□□ 2.4
TTC39A-203ENST00000371747 PNPLA6Q8IY17 1366 aa30.02■■■□□ 2.4
TTC39A-203ENST00000371747 U2AF1L5P0DN76 240 aaPredicted RBP30■■■□□ 2.39
TTC39A-203ENST00000371747 U2AF1Q01081 240 aaKnown RBP eCLIP30■■■□□ 2.39
TTC39A-203ENST00000371747 ZRANB1Q9UGI0 708 aa30■■■□□ 2.39
TTC39A-203ENST00000371747 NRKQ7Z2Y5 1582 aa29.99■■■□□ 2.39
TTC39A-203ENST00000371747 POLKQ9UBT6 870 aa29.99■■■□□ 2.39
TTC39A-203ENST00000371747 IQSEC2Q5JU85 1478 aa29.98■■■□□ 2.39
TTC39A-203ENST00000371747 DUSP27Q5VZP5 1158 aa29.98■■■□□ 2.39
TTC39A-203ENST00000371747 COG3Q96JB2 828 aa29.97■■■□□ 2.39
TTC39A-203ENST00000371747 MAP2P11137 1827 aaKnown RBP29.97■■■□□ 2.39
TTC39A-203ENST00000371747 FBLN1P23142 703 aa29.97■■■□□ 2.39
TTC39A-203ENST00000371747 SLFN5Q08AF3 891 aa29.97■■■□□ 2.39
TTC39A-203ENST00000371747 TTC21BQ7Z4L5 1316 aa29.96■■■□□ 2.39
TTC39A-203ENST00000371747 USP6P35125 1406 aa29.96■■■□□ 2.39
TTC39A-203ENST00000371747 PELP1Q8IZL8 1130 aaKnown RBP29.95■■■□□ 2.39
TTC39A-203ENST00000371747 TCP11L2Q8N4U5 519 aa29.95■■■□□ 2.39
TTC39A-203ENST00000371747 RBM33Q96EV2 1170 aaKnown RBP29.95■■■□□ 2.39
TTC39A-203ENST00000371747 PPP4R2Q9NY27 417 aa29.95■■■□□ 2.39
TTC39A-203ENST00000371747 RGPD8O14715 1765 aaPredicted RBP29.95■■■□□ 2.39
TTC39A-203ENST00000371747 DIAPH1O60610 1272 aaKnown RBP29.95■■■□□ 2.38
TTC39A-203ENST00000371747 AATKQ6ZMQ8 1374 aa29.94■■■□□ 2.38
TTC39A-203ENST00000371747 RRP1P56182 461 aaKnown RBP29.94■■■□□ 2.38
TTC39A-203ENST00000371747 U2SURPO15042 1029 aaKnown RBP29.93■■■□□ 2.38
TTC39A-203ENST00000371747 TRMT2AQ8IZ69 625 aaKnown RBP29.93■■■□□ 2.38
TTC39A-203ENST00000371747 ANKARQ7Z5J8 1434 aa29.93■■■□□ 2.38
TTC39A-203ENST00000371747 WWC1Q8IX03 1113 aa29.92■■■□□ 2.38
TTC39A-203ENST00000371747 NWD1Q149M9 1564 aa29.92■■■□□ 2.38
TTC39A-203ENST00000371747 PMFBP1Q8TBY8 1022 aa29.91■■■□□ 2.38
TTC39A-203ENST00000371747 FMN2Q9NZ56 1722 aa29.91■■■□□ 2.38
TTC39A-203ENST00000371747 SSH2Q76I76 1423 aa29.91■■■□□ 2.38
TTC39A-203ENST00000371747 STRCQ7RTU9 1775 aa29.91■■■□□ 2.38
TTC39A-203ENST00000371747 SPINK5Q9NQ38 1064 aaPredicted RBP29.91■■■□□ 2.38
TTC39A-203ENST00000371747 PPM1GO15355 546 aaPredicted RBP29.9■■■□□ 2.38
TTC39A-203ENST00000371747 NALCNQ8IZF0 1738 aa29.9■■■□□ 2.38
TTC39A-203ENST00000371747 RRP7AQ9Y3A4 280 aaKnown RBP29.89■■■□□ 2.38
TTC39A-203ENST00000371747 EMILIN1Q9Y6C2 1016 aa29.89■■■□□ 2.38
TTC39A-203ENST00000371747 E9PSI1 815 aa29.89■■■□□ 2.37
TTC39A-203ENST00000371747 PHF23Q9BUL5 403 aaPredicted RBP29.89■■■□□ 2.37
TTC39A-203ENST00000371747 NEUROD2Q15784 382 aa29.88■■■□□ 2.37
TTC39A-203ENST00000371747 NCBP3Q53F19 620 aaKnown RBP29.88■■■□□ 2.37
TTC39A-203ENST00000371747 PLEKHF1Q96S99 279 aa29.88■■■□□ 2.37
TTC39A-203ENST00000371747 DMRT2Q9Y5R5 561 aa29.88■■■□□ 2.37
TTC39A-203ENST00000371747 NGDNQ8NEJ9 315 aaKnown RBP29.87■■■□□ 2.37
TTC39A-203ENST00000371747 OVOS2A0A0J9YW53 1432 aa29.86■■■□□ 2.37
TTC39A-203ENST00000371747 OVOS2Q6IE36 1432 aa29.86■■■□□ 2.37
TTC39A-203ENST00000371747 CDK12Q9NYV4 1490 aaPredicted RBP29.85■■■□□ 2.37
TTC39A-203ENST00000371747 CCDC27Q2M243 656 aa29.85■■■□□ 2.37
TTC39A-203ENST00000371747 STRCP1A6NGW2 1772 aa29.84■■■□□ 2.37
TTC39A-203ENST00000371747 TTC21AQ8NDW8 1320 aa29.84■■■□□ 2.37
TTC39A-203ENST00000371747 RRS1Q15050 365 aaKnown RBP29.82■■■□□ 2.37
TTC39A-203ENST00000371747 ADGRL3Q9HAR2 1447 aa29.82■■■□□ 2.36
TTC39A-203ENST00000371747 PROSER2Q86WR7 435 aaPredicted RBP29.82■■■□□ 2.36
TTC39A-203ENST00000371747 WDR63Q8IWG1 891 aa29.8■■■□□ 2.36
TTC39A-203ENST00000371747 PNNQ9H307 717 aaKnown RBP29.8■■■□□ 2.36
TTC39A-203ENST00000371747 MAPK8IP3Q9UPT6 1336 aa29.79■■■□□ 2.36
TTC39A-203ENST00000371747 FCHSD2O94868 740 aa29.78■■■□□ 2.36
TTC39A-203ENST00000371747 IL13P35225 146 aa29.78■■■□□ 2.36
TTC39A-203ENST00000371747 USP31Q70CQ4 1352 aa29.78■■■□□ 2.36
TTC39A-203ENST00000371747 TMPOP42166 694 aaKnown RBP29.76■■■□□ 2.36
TTC39A-203ENST00000371747 B4GALNT3Q6L9W6 998 aa29.76■■■□□ 2.36
TTC39A-203ENST00000371747 RSPH6AQ9H0K4 717 aa29.75■■■□□ 2.35
TTC39A-203ENST00000371747 LRRC7Q96NW7 1537 aa29.75■■■□□ 2.35
TTC39A-203ENST00000371747 C14orf37Q86TY3 774 aa29.74■■■□□ 2.35
TTC39A-203ENST00000371747 PLIN1O60240 522 aa29.74■■■□□ 2.35
TTC39A-203ENST00000371747 PIK3C2AO00443 1686 aa29.72■■■□□ 2.35
TTC39A-203ENST00000371747 PHF8Q9UPP1 1060 aa29.72■■■□□ 2.35
TTC39A-203ENST00000371747 PRKAR2BP31323 418 aa29.7■■■□□ 2.35
TTC39A-203ENST00000371747 TRIM35Q9UPQ4 493 aa29.7■■■□□ 2.34
TTC39A-203ENST00000371747 EXOC6Q8TAG9 804 aa29.69■■■□□ 2.34
TTC39A-203ENST00000371747 HMOX1P09601 288 aa29.68■■■□□ 2.34
TTC39A-203ENST00000371747 TMEM94Q12767 1356 aa29.68■■■□□ 2.34
TTC39A-203ENST00000371747 C19orf44Q9H6X5 657 aa29.68■■■□□ 2.34
TTC39A-203ENST00000371747 RIPK4P57078 832 aa29.67■■■□□ 2.34
TTC39A-203ENST00000371747 PEAK1Q9H792 1746 aa29.66■■■□□ 2.34
TTC39A-203ENST00000371747 NEFMP07197 916 aa29.65■■■□□ 2.34
TTC39A-203ENST00000371747 SOX12O15370 315 aa29.64■■■□□ 2.34
TTC39A-203ENST00000371747 NLRP6P59044 892 aa29.63■■■□□ 2.33
TTC39A-203ENST00000371747 EIF4A2Q14240 407 aaKnown RBP29.63■■■□□ 2.33
TTC39A-203ENST00000371747 CCDC136Q96JN2 1154 aa29.63■■■□□ 2.33
TTC39A-203ENST00000371747 MYH16Q9H6N6 1097 aa29.63■■■□□ 2.33
TTC39A-203ENST00000371747 NCOA3Q9Y6Q9 1424 aa29.63■■■□□ 2.33
TTC39A-203ENST00000371747 ESCO1Q5FWF5 840 aa29.63■■■□□ 2.33
TTC39A-203ENST00000371747 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.63■■■□□ 2.33
TTC39A-203ENST00000371747 USP54Q70EL1 1684 aa29.62■■■□□ 2.33
TTC39A-203ENST00000371747 PHACTR3Q96KR7 559 aa29.62■■■□□ 2.33
TTC39A-203ENST00000371747 MAP3K19Q56UN5 1328 aa29.62■■■□□ 2.33
TTC39A-203ENST00000371747 ZNF335Q9H4Z2 1342 aaPredicted RBP29.61■■■□□ 2.33
TTC39A-203ENST00000371747 MARF1Q9Y4F3 1742 aaKnown RBP29.61■■■□□ 2.33
TTC39A-203ENST00000371747 PAK3O75914 559 aaPredicted RBP29.6■■■□□ 2.33
TTC39A-203ENST00000371747 HSP90AB2PQ58FF8 381 aa29.6■■■□□ 2.33
TTC39A-203ENST00000371747 XIRP1Q702N8 1843 aaKnown RBP29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms