RNA–Protein interactions for RNA: ENST00000370819.5

COL21A1-203, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL21A1, Length 4,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-203ENST00000370819 WWC1Q8IX03 1113 aa9.27□□□□□ -0.93
COL21A1-203ENST00000370819 HMGN5P82970 282 aaKnown RBP9.27□□□□□ -0.93
COL21A1-203ENST00000370819 SLC4A2P04920 1241 aa9.26□□□□□ -0.93
COL21A1-203ENST00000370819 CNTROBQ8N137 903 aa9.26□□□□□ -0.93
COL21A1-203ENST00000370819 FSD1Q9BTV5 496 aa9.26□□□□□ -0.93
COL21A1-203ENST00000370819 NFXL1Q6ZNB6 911 aa9.26□□□□□ -0.93
COL21A1-203ENST00000370819 PCMTD1Q96MG8 357 aaPredicted RBP9.26□□□□□ -0.93
COL21A1-203ENST00000370819 CIZ1Q9ULV3 898 aaPredicted RBP9.26□□□□□ -0.93
COL21A1-203ENST00000370819 CEBPZQ03701 1054 aaKnown RBP9.25□□□□□ -0.93
COL21A1-203ENST00000370819 CWC22Q9HCG8 908 aaKnown RBP9.25□□□□□ -0.93
COL21A1-203ENST00000370819 ARGLU1Q9NWB6 273 aaPredicted RBP9.25□□□□□ -0.93
COL21A1-203ENST00000370819 POLA1P09884 1462 aaPredicted RBP9.25□□□□□ -0.93
COL21A1-203ENST00000370819 NLRP6P59044 892 aa9.25□□□□□ -0.93
COL21A1-203ENST00000370819 RIC3Q7Z5B4 369 aa9.25□□□□□ -0.93
COL21A1-203ENST00000370819 RALYLQ86SE5 291 aaKnown RBP9.25□□□□□ -0.93
COL21A1-203ENST00000370819 TMEM57Q8N5G2 664 aa9.25□□□□□ -0.93
COL21A1-203ENST00000370819 TIAM1Q13009 1591 aa9.25□□□□□ -0.93
COL21A1-203ENST00000370819 GNAI2P04899 355 aa9.25□□□□□ -0.93
COL21A1-203ENST00000370819 PDCP20941 246 aa9.25□□□□□ -0.93
COL21A1-203ENST00000370819 WASHC4Q2M389 1173 aa9.25□□□□□ -0.93
COL21A1-203ENST00000370819 VPS53Q5VIR6 699 aa9.25□□□□□ -0.93
COL21A1-203ENST00000370819 ERBINQ96RT1 1412 aa9.24□□□□□ -0.93
COL21A1-203ENST00000370819 KINO60870 393 aaKnown RBP9.24□□□□□ -0.93
COL21A1-203ENST00000370819 SULT6B1Q6IMI4 303 aa9.24□□□□□ -0.93
COL21A1-203ENST00000370819 ANKRD20A12PQ8NF67 263 aa9.24□□□□□ -0.93
COL21A1-203ENST00000370819 PRAM1Q96QH2 718 aa9.24□□□□□ -0.93
COL21A1-203ENST00000370819 KDM4AO75164 1064 aa9.24□□□□□ -0.93
COL21A1-203ENST00000370819 PSMA5P28066 241 aa9.24□□□□□ -0.93
COL21A1-203ENST00000370819 CCDC70Q6NSX1 233 aa9.24□□□□□ -0.93
COL21A1-203ENST00000370819 CEP89Q96ST8 783 aa9.24□□□□□ -0.93
COL21A1-203ENST00000370819 PDILTQ8N807 584 aa9.24□□□□□ -0.93
COL21A1-203ENST00000370819 ZNF428Q96B54 188 aa9.24□□□□□ -0.93
COL21A1-203ENST00000370819 ATP2B1P20020 1258 aa9.23□□□□□ -0.93
COL21A1-203ENST00000370819 PSME1Q06323 249 aa9.23□□□□□ -0.93
COL21A1-203ENST00000370819 CCDC30Q5VVM6 783 aa9.23□□□□□ -0.93
COL21A1-203ENST00000370819 TBC1D2Q9BYX2 928 aa9.23□□□□□ -0.93
COL21A1-203ENST00000370819 HOOK1Q9UJC3 728 aaKnown RBP9.23□□□□□ -0.93
COL21A1-203ENST00000370819 C9orf84Q5VXU9 1444 aa9.23□□□□□ -0.93
COL21A1-203ENST00000370819 PRG4Q92954 1404 aaPredicted RBP9.23□□□□□ -0.93
COL21A1-203ENST00000370819 LETM1O95202 739 aaPredicted RBP9.23□□□□□ -0.93
COL21A1-203ENST00000370819 CT47B1P0C2W7 299 aaPredicted RBP9.23□□□□□ -0.93
COL21A1-203ENST00000370819 NAT10Q9H0A0 1025 aaKnown RBP9.23□□□□□ -0.93
COL21A1-203ENST00000370819 CABP1Q9NZU7 370 aa9.23□□□□□ -0.93
COL21A1-203ENST00000370819 NINLQ9Y2I6 1382 aa9.23□□□□□ -0.93
COL21A1-203ENST00000370819 WDR33Q9C0J8 1336 aaKnown RBP9.23□□□□□ -0.93
COL21A1-203ENST00000370819 UQCRHLA0A096LP55 91 aa9.23□□□□□ -0.93
COL21A1-203ENST00000370819 UQCRHP07919 91 aa9.23□□□□□ -0.93
COL21A1-203ENST00000370819 ZSCAN30Q86W11 494 aa9.23□□□□□ -0.93
COL21A1-203ENST00000370819 THUMPD2Q9BTF0 503 aaKnown RBP9.23□□□□□ -0.93
COL21A1-203ENST00000370819 MAP4K4O95819 1239 aaPredicted RBP9.22□□□□□ -0.93
COL21A1-203ENST00000370819 RARSP54136 660 aaKnown RBP9.22□□□□□ -0.93
COL21A1-203ENST00000370819 SAFBQ15424 915 aaKnown RBP eCLIP9.22□□□□□ -0.93
COL21A1-203ENST00000370819 ABCA10Q8WWZ4 1543 aa9.22□□□□□ -0.93
COL21A1-203ENST00000370819 ABCA5Q8WWZ7 1642 aa9.22□□□□□ -0.93
COL21A1-203ENST00000370819 SSH1Q8WYL5 1049 aa9.22□□□□□ -0.93
COL21A1-203ENST00000370819 SYCE3A1L190 88 aa9.22□□□□□ -0.93
COL21A1-203ENST00000370819 RRP9O43818 475 aaKnown RBP9.22□□□□□ -0.93
COL21A1-203ENST00000370819 SMC2O95347 1197 aa9.22□□□□□ -0.93
COL21A1-203ENST00000370819 STK3Q13188 491 aa9.22□□□□□ -0.93
COL21A1-203ENST00000370819 UPF3BQ9BZI7 483 aaKnown RBP9.22□□□□□ -0.93
COL21A1-203ENST00000370819 CCDC192P0DO97 292 aa9.21□□□□□ -0.93
COL21A1-203ENST00000370819 TMPOP42166 694 aaKnown RBP9.21□□□□□ -0.93
COL21A1-203ENST00000370819 HSP90B2PQ58FF3 399 aa9.21□□□□□ -0.93
COL21A1-203ENST00000370819 HDGFL1Q5TGJ6 251 aa9.21□□□□□ -0.93
COL21A1-203ENST00000370819 TTLL5Q6EMB2 1281 aa9.21□□□□□ -0.93
COL21A1-203ENST00000370819 LRRCC1Q9C099 1032 aa9.21□□□□□ -0.93
COL21A1-203ENST00000370819 IL1RAPL2Q9NP60 686 aa9.21□□□□□ -0.93
COL21A1-203ENST00000370819 ANKRD30BQ9BXX2 1392 aa9.21□□□□□ -0.93
COL21A1-203ENST00000370819 DNAJC2Q99543 621 aaKnown RBP9.21□□□□□ -0.93
COL21A1-203ENST00000370819 SETQ01105 290 aaPredicted RBP9.21□□□□□ -0.94
COL21A1-203ENST00000370819 CYB5RLQ6IPT4 315 aa9.21□□□□□ -0.94
COL21A1-203ENST00000370819 RAPGEF4Q8WZA2 1011 aa9.21□□□□□ -0.94
COL21A1-203ENST00000370819 ZMYND15Q9H091 742 aa9.21□□□□□ -0.94
COL21A1-203ENST00000370819 CYP46A1Q9Y6A2 500 aa9.21□□□□□ -0.94
COL21A1-203ENST00000370819 DUSP27Q5VZP5 1158 aa9.21□□□□□ -0.94
COL21A1-203ENST00000370819 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.2□□□□□ -0.94
COL21A1-203ENST00000370819 LARP1BQ659C4 914 aaKnown RBP9.2□□□□□ -0.94
COL21A1-203ENST00000370819 OLFM4Q6UX06 510 aa9.2□□□□□ -0.94
COL21A1-203ENST00000370819 EXOC6BQ9Y2D4 811 aa9.2□□□□□ -0.94
COL21A1-203ENST00000370819 DAPK1P53355 1430 aa9.2□□□□□ -0.94
COL21A1-203ENST00000370819 SCAPERQ9BY12 1400 aa9.2□□□□□ -0.94
COL21A1-203ENST00000370819 KRT85P78386 507 aa9.2□□□□□ -0.94
COL21A1-203ENST00000370819 GAS2L2Q8NHY3 880 aa9.2□□□□□ -0.94
COL21A1-203ENST00000370819 TNMDQ9H2S6 317 aa9.2□□□□□ -0.94
COL21A1-203ENST00000370819 NLRP2Q9NX02 1062 aa9.2□□□□□ -0.94
COL21A1-203ENST00000370819 PATL2C9JE40 543 aaKnown RBP9.19□□□□□ -0.94
COL21A1-203ENST00000370819 G3V3G9 751 aa9.19□□□□□ -0.94
COL21A1-203ENST00000370819 STK38Q15208 465 aa9.19□□□□□ -0.94
COL21A1-203ENST00000370819 DCAF8Q5TAQ9 597 aa9.19□□□□□ -0.94
COL21A1-203ENST00000370819 FILIP1Q7Z7B0 1213 aa9.19□□□□□ -0.94
COL21A1-203ENST00000370819 CCDC112Q8NEF3 446 aa9.19□□□□□ -0.94
COL21A1-203ENST00000370819 ERICH2A1L162 156 aa9.19□□□□□ -0.94
COL21A1-203ENST00000370819 DHX16O60231 1041 aaKnown RBP9.19□□□□□ -0.94
COL21A1-203ENST00000370819 SSFA2P28290 1259 aa9.19□□□□□ -0.94
COL21A1-203ENST00000370819 CCT4P50991 539 aaKnown RBP9.19□□□□□ -0.94
COL21A1-203ENST00000370819 CCDC47Q96A33 483 aaKnown RBP9.19□□□□□ -0.94
COL21A1-203ENST00000370819 RAD21O60216 631 aa9.19□□□□□ -0.94
COL21A1-203ENST00000370819 SYTL4Q96C24 671 aaPredicted RBP9.19□□□□□ -0.94
COL21A1-203ENST00000370819 CDK19Q9BWU1 502 aa9.19□□□□□ -0.94
COL21A1-203ENST00000370819 SIL1Q9H173 461 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms