RNA–Protein interactions for RNA: ENST00000370500.9

GTF2B-201, Transcript of general transcription factor IIB, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2B, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-201ENST00000370500 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.73□□□□□ -0.21
GTF2B-201ENST00000370500 ROBO2Q9HCK4 1378 aa13.72□□□□□ -0.21
GTF2B-201ENST00000370500 TECPR2O15040 1411 aa13.72□□□□□ -0.21
GTF2B-201ENST00000370500 TRIM26Q12899 539 aaPredicted RBP13.71□□□□□ -0.21
GTF2B-201ENST00000370500 DHX57Q6P158 1386 aaKnown RBP13.71□□□□□ -0.21
GTF2B-201ENST00000370500 ROBO1Q9Y6N7 1651 aa13.71□□□□□ -0.21
GTF2B-201ENST00000370500 DCAF11Q8TEB1 546 aa13.71□□□□□ -0.22
GTF2B-201ENST00000370500 CFAP70Q5T0N1 1121 aa13.7□□□□□ -0.22
GTF2B-201ENST00000370500 TMEM132EQ6IEE7 984 aa13.7□□□□□ -0.22
GTF2B-201ENST00000370500 YTHDC2Q9H6S0 1430 aaKnown RBP13.69□□□□□ -0.22
GTF2B-201ENST00000370500 CHRM1P11229 460 aaPredicted RBP13.69□□□□□ -0.22
GTF2B-201ENST00000370500 GOLGA2Q08379 1002 aa13.69□□□□□ -0.22
GTF2B-201ENST00000370500 BRINP3Q76B58 766 aa13.69□□□□□ -0.22
GTF2B-201ENST00000370500 STK26Q9P289 416 aa13.69□□□□□ -0.22
GTF2B-201ENST00000370500 MST1RQ04912 1400 aa13.68□□□□□ -0.22
GTF2B-201ENST00000370500 LAMC1P11047 1609 aa13.68□□□□□ -0.22
GTF2B-201ENST00000370500 KDM2AQ9Y2K7 1162 aa13.68□□□□□ -0.22
GTF2B-201ENST00000370500 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.67□□□□□ -0.22
GTF2B-201ENST00000370500 JCADQ9P266 1359 aa13.66□□□□□ -0.22
GTF2B-201ENST00000370500 MKRN3Q13064 507 aaKnown RBP13.65□□□□□ -0.22
GTF2B-201ENST00000370500 WAPLQ7Z5K2 1190 aa13.65□□□□□ -0.22
GTF2B-201ENST00000370500 ASXL1Q8IXJ9 1541 aa13.64□□□□□ -0.23
GTF2B-201ENST00000370500 C1orf167Q5SNV9 1468 aa13.64□□□□□ -0.23
GTF2B-201ENST00000370500 AHDC1Q5TGY3 1603 aaPredicted RBP13.64□□□□□ -0.23
GTF2B-201ENST00000370500 ST18O60284 1047 aa13.64□□□□□ -0.23
GTF2B-201ENST00000370500 KNDC1Q76NI1 1749 aa13.63□□□□□ -0.23
GTF2B-201ENST00000370500 NALCNQ8IZF0 1738 aa13.63□□□□□ -0.23
GTF2B-201ENST00000370500 SNPHO15079 494 aa13.63□□□□□ -0.23
GTF2B-201ENST00000370500 LRRC59Q96AG4 307 aaKnown RBP13.63□□□□□ -0.23
GTF2B-201ENST00000370500 PHLPP1O60346 1717 aa13.63□□□□□ -0.23
GTF2B-201ENST00000370500 SPATA31A6Q5VVP1 1343 aa13.63□□□□□ -0.23
GTF2B-201ENST00000370500 MED1Q15648 1581 aaPredicted RBP13.62□□□□□ -0.23
GTF2B-201ENST00000370500 CDAN1Q8IWY9 1227 aa13.62□□□□□ -0.23
GTF2B-201ENST00000370500 DLC1Q96QB1 1528 aa13.62□□□□□ -0.23
GTF2B-201ENST00000370500 CDC42BPGQ6DT37 1551 aa13.62□□□□□ -0.23
GTF2B-201ENST00000370500 POGKQ9P215 609 aa13.61□□□□□ -0.23
GTF2B-201ENST00000370500 PRAM1Q96QH2 718 aa13.6□□□□□ -0.23
GTF2B-201ENST00000370500 ADGRB1O14514 1584 aa13.6□□□□□ -0.23
GTF2B-201ENST00000370500 COL16A1Q07092 1604 aaPredicted RBP13.6□□□□□ -0.23
GTF2B-201ENST00000370500 PLEKHH1Q9ULM0 1364 aa13.59□□□□□ -0.23
GTF2B-201ENST00000370500 PSEN1P49768 467 aa13.59□□□□□ -0.23
GTF2B-201ENST00000370500 ORAI2Q96SN7 254 aa13.59□□□□□ -0.23
GTF2B-201ENST00000370500 ESCO1Q5FWF5 840 aa13.58□□□□□ -0.23
GTF2B-201ENST00000370500 SPOCK2Q92563 424 aa13.58□□□□□ -0.23
GTF2B-201ENST00000370500 L3MBTL3Q96JM7 780 aaPredicted RBP13.58□□□□□ -0.23
GTF2B-201ENST00000370500 TRAK1Q9UPV9 953 aa13.58□□□□□ -0.23
GTF2B-201ENST00000370500 PDCD7Q8N8D1 485 aaKnown RBP13.58□□□□□ -0.24
GTF2B-201ENST00000370500 L3MBTL2Q969R5 705 aa13.58□□□□□ -0.24
GTF2B-201ENST00000370500 TMEM121BQ9BXQ6 578 aaPredicted RBP13.58□□□□□ -0.24
GTF2B-201ENST00000370500 SOS2Q07890 1332 aaPredicted RBP13.57□□□□□ -0.24
GTF2B-201ENST00000370500 NPHP3Q7Z494 1330 aa13.57□□□□□ -0.24
GTF2B-201ENST00000370500 C3orf67Q6ZVT6 689 aa13.57□□□□□ -0.24
GTF2B-201ENST00000370500 NHSL1Q5SYE7 1610 aa13.56□□□□□ -0.24
GTF2B-201ENST00000370500 ILDR2Q71H61 639 aa13.56□□□□□ -0.24
GTF2B-201ENST00000370500 SIN3AQ96ST3 1273 aa13.56□□□□□ -0.24
GTF2B-201ENST00000370500 EIF3AQ14152 1382 aaKnown RBP13.55□□□□□ -0.24
GTF2B-201ENST00000370500 KIAA1210Q9ULL0 1709 aa13.55□□□□□ -0.24
GTF2B-201ENST00000370500 PDAP1Q13442 181 aaKnown RBP13.55□□□□□ -0.24
GTF2B-201ENST00000370500 NEUROD1Q13562 356 aa13.55□□□□□ -0.24
GTF2B-201ENST00000370500 SAFB2Q14151 953 aaKnown RBP eCLIP13.54□□□□□ -0.24
GTF2B-201ENST00000370500 DDX17Q92841 729 aaKnown RBP13.54□□□□□ -0.24
GTF2B-201ENST00000370500 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.54□□□□□ -0.24
GTF2B-201ENST00000370500 SHPRHQ149N8 1683 aa13.54□□□□□ -0.24
GTF2B-201ENST00000370500 FOXO3O43524 673 aa13.53□□□□□ -0.24
GTF2B-201ENST00000370500 CIZ1Q9ULV3 898 aaPredicted RBP13.53□□□□□ -0.24
GTF2B-201ENST00000370500 ANKARQ7Z5J8 1434 aa13.52□□□□□ -0.24
GTF2B-201ENST00000370500 NUTM2FA1L443 756 aa13.52□□□□□ -0.25
GTF2B-201ENST00000370500 WASLO00401 505 aaPredicted RBP13.52□□□□□ -0.25
GTF2B-201ENST00000370500 MEX3CQ5U5Q3 659 aaKnown RBP13.52□□□□□ -0.25
GTF2B-201ENST00000370500 RGS17Q9UGC6 210 aaPredicted RBP13.52□□□□□ -0.25
GTF2B-201ENST00000370500 PHF8Q9UPP1 1060 aa13.52□□□□□ -0.25
GTF2B-201ENST00000370500 ADGRB2O60241 1585 aa13.51□□□□□ -0.25
GTF2B-201ENST00000370500 SOCS7O14512 581 aa13.51□□□□□ -0.25
GTF2B-201ENST00000370500 PSME1Q06323 249 aa13.51□□□□□ -0.25
GTF2B-201ENST00000370500 NBPF1Q3BBV0 1214 aa13.51□□□□□ -0.25
GTF2B-201ENST00000370500 FMN2Q9NZ56 1722 aa13.51□□□□□ -0.25
GTF2B-201ENST00000370500 PNPLA6Q8IY17 1366 aa13.51□□□□□ -0.25
GTF2B-201ENST00000370500 IFNLR1Q8IU57 520 aaPredicted RBP13.5□□□□□ -0.25
GTF2B-201ENST00000370500 MINK1Q8N4C8 1332 aaPredicted RBP13.5□□□□□ -0.25
GTF2B-201ENST00000370500 ZNF772Q68DY9 489 aaPredicted RBP13.49□□□□□ -0.25
GTF2B-201ENST00000370500 NUTM2BA6NNL0 878 aaPredicted RBP13.48□□□□□ -0.25
GTF2B-201ENST00000370500 NUTM2EB1AL46 878 aaPredicted RBP13.48□□□□□ -0.25
GTF2B-201ENST00000370500 KRT28Q7Z3Y7 464 aa13.48□□□□□ -0.25
GTF2B-201ENST00000370500 NUTM2AQ8IVF1 878 aaPredicted RBP13.48□□□□□ -0.25
GTF2B-201ENST00000370500 HIRIP3Q9BW71 556 aaPredicted RBP13.48□□□□□ -0.25
GTF2B-201ENST00000370500 PXDNQ92626 1479 aa13.48□□□□□ -0.25
GTF2B-201ENST00000370500 KIF1AQ12756 1690 aa13.48□□□□□ -0.25
GTF2B-201ENST00000370500 TONSLQ96HA7 1378 aa13.47□□□□□ -0.25
GTF2B-201ENST00000370500 LRP6O75581 1613 aa13.47□□□□□ -0.25
GTF2B-201ENST00000370500 SPATA31A3Q5VYP0 1347 aa13.46□□□□□ -0.25
GTF2B-201ENST00000370500 CENPJQ9HC77 1338 aaPredicted RBP13.46□□□□□ -0.25
GTF2B-201ENST00000370500 TULP4Q9NRJ4 1543 aa13.46□□□□□ -0.25
GTF2B-201ENST00000370500 SBNO1A3KN83 1393 aa13.46□□□□□ -0.26
GTF2B-201ENST00000370500 CDK19Q9BWU1 502 aa13.45□□□□□ -0.26
GTF2B-201ENST00000370500 ARHGEF28Q8N1W1 1705 aaKnown RBP13.45□□□□□ -0.26
GTF2B-201ENST00000370500 ROCK2O75116 1388 aaKnown RBP13.45□□□□□ -0.26
GTF2B-201ENST00000370500 GPRASP1Q5JY77 1395 aa13.45□□□□□ -0.26
GTF2B-201ENST00000370500 CLSPNQ9HAW4 1339 aa13.45□□□□□ -0.26
GTF2B-201ENST00000370500 XPCQ01831 940 aaPredicted RBP13.45□□□□□ -0.26
GTF2B-201ENST00000370500 POTEAQ6S8J7 498 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms