RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 TNS3Q68CZ2 1445 aa21.5■■□□□ 1.03
PRPF38B-202ENST00000370022 TRPM3Q9HCF6 1732 aaPredicted RBP21.49■■□□□ 1.03
PRPF38B-202ENST00000370022 ARHGEF10O15013 1369 aa21.48■■□□□ 1.03
PRPF38B-202ENST00000370022 SSH2Q76I76 1423 aa21.48■■□□□ 1.03
PRPF38B-202ENST00000370022 MON2Q7Z3U7 1717 aa21.48■■□□□ 1.03
PRPF38B-202ENST00000370022 PAK3O75914 559 aaPredicted RBP21.48■■□□□ 1.03
PRPF38B-202ENST00000370022 EDC4Q6P2E9 1401 aaKnown RBP21.47■■□□□ 1.03
PRPF38B-202ENST00000370022 TTC21AQ8NDW8 1320 aa21.46■■□□□ 1.03
PRPF38B-202ENST00000370022 PNPLA6Q8IY17 1366 aa21.45■■□□□ 1.02
PRPF38B-202ENST00000370022 SHPRHQ149N8 1683 aa21.45■■□□□ 1.02
PRPF38B-202ENST00000370022 NRKQ7Z2Y5 1582 aa21.45■■□□□ 1.02
PRPF38B-202ENST00000370022 TTC21BQ7Z4L5 1316 aa21.45■■□□□ 1.02
PRPF38B-202ENST00000370022 ALS2Q96Q42 1657 aa21.44■■□□□ 1.02
PRPF38B-202ENST00000370022 SPATA31A6Q5VVP1 1343 aa21.42■■□□□ 1.02
PRPF38B-202ENST00000370022 LMOD2Q6P5Q4 547 aa21.42■■□□□ 1.02
PRPF38B-202ENST00000370022 ABTB2Q8N961 1025 aa21.42■■□□□ 1.02
PRPF38B-202ENST00000370022 COL22A1Q8NFW1 1626 aaPredicted RBP21.42■■□□□ 1.02
PRPF38B-202ENST00000370022 PANK3Q9H999 370 aa21.41■■□□□ 1.02
PRPF38B-202ENST00000370022 ILDR2Q71H61 639 aa21.4■■□□□ 1.02
PRPF38B-202ENST00000370022 CARD14Q9BXL6 1004 aa21.4■■□□□ 1.02
PRPF38B-202ENST00000370022 NLRP13Q86W25 1043 aa21.39■■□□□ 1.01
PRPF38B-202ENST00000370022 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.39■■□□□ 1.01
PRPF38B-202ENST00000370022 NSD3Q9BZ95 1437 aa21.38■■□□□ 1.01
PRPF38B-202ENST00000370022 MED1Q15648 1581 aaPredicted RBP21.38■■□□□ 1.01
PRPF38B-202ENST00000370022 ZNF316A6NFI3 1004 aaPredicted RBP21.37■■□□□ 1.01
PRPF38B-202ENST00000370022 PIK3C2AO00443 1686 aa21.36■■□□□ 1.01
PRPF38B-202ENST00000370022 USP31Q70CQ4 1352 aa21.36■■□□□ 1.01
PRPF38B-202ENST00000370022 NLRP6P59044 892 aa21.36■■□□□ 1.01
PRPF38B-202ENST00000370022 CGNL1Q0VF96 1302 aa21.35■■□□□ 1.01
PRPF38B-202ENST00000370022 NME9Q86XW9 330 aa21.34■■□□□ 1.01
PRPF38B-202ENST00000370022 KNSTRNQ9Y448 316 aa21.34■■□□□ 1.01
PRPF38B-202ENST00000370022 USP19O94966 1318 aa21.34■■□□□ 1.01
PRPF38B-202ENST00000370022 NUTM2GQ5VZR2 741 aa21.33■■□□□ 1.01
PRPF38B-202ENST00000370022 USP54Q70EL1 1684 aa21.33■■□□□ 1
PRPF38B-202ENST00000370022 FYB1O15117 783 aa21.32■■□□□ 1
PRPF38B-202ENST00000370022 HAP1P54257 671 aaPredicted RBP21.32■■□□□ 1
PRPF38B-202ENST00000370022 PER1O15534 1290 aaPredicted RBP21.31■■□□□ 1
PRPF38B-202ENST00000370022 KCNH5Q8NCM2 988 aa21.31■■□□□ 1
PRPF38B-202ENST00000370022 NSD2O96028 1365 aa21.3■■□□□ 1
PRPF38B-202ENST00000370022 OVOS2A0A0J9YW53 1432 aa21.3■■□□□ 1
PRPF38B-202ENST00000370022 OVOS2Q6IE36 1432 aa21.3■■□□□ 1
PRPF38B-202ENST00000370022 SLIT3O75094 1523 aa21.3■■□□□ 1
PRPF38B-202ENST00000370022 NUTM2BA6NNL0 878 aaPredicted RBP21.3■■□□□ 1
PRPF38B-202ENST00000370022 NUTM2EB1AL46 878 aaPredicted RBP21.3■■□□□ 1
PRPF38B-202ENST00000370022 NUTM2AQ8IVF1 878 aaPredicted RBP21.3■■□□□ 1
PRPF38B-202ENST00000370022 CABLES1Q8TDN4 633 aa21.3■■□□□ 1
PRPF38B-202ENST00000370022 COG3Q96JB2 828 aa21.3■■□□□ 1
PRPF38B-202ENST00000370022 CRYBG1Q9Y4K1 1723 aa21.3■■□□□ 1
PRPF38B-202ENST00000370022 ABCA3Q99758 1704 aa21.29■■□□□ 1
PRPF38B-202ENST00000370022 GCP02774 474 aa21.28■■□□□ 1
PRPF38B-202ENST00000370022 KIF20BQ96Q89 1820 aa21.28■■□□□ 1
PRPF38B-202ENST00000370022 LRP6O75581 1613 aa21.28■■□□□ 1
PRPF38B-202ENST00000370022 PHRF1Q9P1Y6 1649 aaKnown RBP21.28■■□□□ 1
PRPF38B-202ENST00000370022 GGNBP2Q9H3C7 697 aa21.27■■□□□ 1
PRPF38B-202ENST00000370022 PLEKHG5O94827 1062 aa21.27■□□□□ 0.99
PRPF38B-202ENST00000370022 ZRANB1Q9UGI0 708 aa21.27■□□□□ 0.99
PRPF38B-202ENST00000370022 MARF1Q9Y4F3 1742 aaKnown RBP21.26■□□□□ 0.99
PRPF38B-202ENST00000370022 NPC1L1Q9UHC9 1359 aa21.25■□□□□ 0.99
PRPF38B-202ENST00000370022 DDX10Q13206 875 aaKnown RBP21.25■□□□□ 0.99
PRPF38B-202ENST00000370022 AMER1Q5JTC6 1135 aaPredicted RBP21.25■□□□□ 0.99
PRPF38B-202ENST00000370022 MEX3CQ5U5Q3 659 aaKnown RBP21.24■□□□□ 0.99
PRPF38B-202ENST00000370022 CPDO75976 1380 aa21.24■□□□□ 0.99
PRPF38B-202ENST00000370022 ADAMTS2O95450 1211 aa21.23■□□□□ 0.99
PRPF38B-202ENST00000370022 NFAT5O94916 1531 aa21.21■□□□□ 0.99
PRPF38B-202ENST00000370022 ANKRD26Q9UPS8 1709 aa21.21■□□□□ 0.99
PRPF38B-202ENST00000370022 SOCS7O14512 581 aa21.21■□□□□ 0.99
PRPF38B-202ENST00000370022 KIAA0232Q92628 1395 aa21.2■□□□□ 0.98
PRPF38B-202ENST00000370022 ZC3H6P61129 1189 aaKnown RBP21.19■□□□□ 0.98
PRPF38B-202ENST00000370022 PRDM11Q9NQV5 511 aa21.19■□□□□ 0.98
PRPF38B-202ENST00000370022 SOX12O15370 315 aa21.19■□□□□ 0.98
PRPF38B-202ENST00000370022 C8orf37Q96NL8 207 aa21.19■□□□□ 0.98
PRPF38B-202ENST00000370022 PHF23Q9BUL5 403 aaPredicted RBP21.19■□□□□ 0.98
PRPF38B-202ENST00000370022 MORC1Q86VD1 984 aa21.18■□□□□ 0.98
PRPF38B-202ENST00000370022 ARHGEF25Q86VW2 580 aa21.18■□□□□ 0.98
PRPF38B-202ENST00000370022 NGLY1Q96IV0 654 aa21.18■□□□□ 0.98
PRPF38B-202ENST00000370022 FAM83GA6ND36 823 aa21.17■□□□□ 0.98
PRPF38B-202ENST00000370022 AATKQ6ZMQ8 1374 aa21.17■□□□□ 0.98
PRPF38B-202ENST00000370022 COL14A1Q05707 1796 aaKnown RBP21.17■□□□□ 0.98
PRPF38B-202ENST00000370022 FNBP4Q8N3X1 1017 aaPredicted RBP21.16■□□□□ 0.98
PRPF38B-202ENST00000370022 CC2D1BQ5T0F9 858 aaKnown RBP21.15■□□□□ 0.98
PRPF38B-202ENST00000370022 ABCC6O95255 1503 aa21.15■□□□□ 0.98
PRPF38B-202ENST00000370022 SLIT2O94813 1529 aa21.14■□□□□ 0.97
PRPF38B-202ENST00000370022 KIF24Q5T7B8 1368 aa21.13■□□□□ 0.97
PRPF38B-202ENST00000370022 CHRNA2Q15822 529 aa21.12■□□□□ 0.97
PRPF38B-202ENST00000370022 AFF2P51816 1311 aa21.12■□□□□ 0.97
PRPF38B-202ENST00000370022 MAP3K19Q56UN5 1328 aa21.12■□□□□ 0.97
PRPF38B-202ENST00000370022 RTL1A6NKG5 1358 aa21.12■□□□□ 0.97
PRPF38B-202ENST00000370022 NWD2Q9ULI1 1742 aa21.12■□□□□ 0.97
PRPF38B-202ENST00000370022 ZBTB7CA1YPR0 619 aa21.11■□□□□ 0.97
PRPF38B-202ENST00000370022 PLCH1Q4KWH8 1693 aa21.11■□□□□ 0.97
PRPF38B-202ENST00000370022 LMO7Q8WWI1 1683 aa21.11■□□□□ 0.97
PRPF38B-202ENST00000370022 ZNF772Q68DY9 489 aaPredicted RBP21.1■□□□□ 0.97
PRPF38B-202ENST00000370022 BTG4Q9NY30 223 aa21.1■□□□□ 0.97
PRPF38B-202ENST00000370022 LTN1O94822 1766 aa21.1■□□□□ 0.97
PRPF38B-202ENST00000370022 TNNT2P45379 298 aaPredicted RBP21.1■□□□□ 0.97
PRPF38B-202ENST00000370022 RRS1Q15050 365 aaKnown RBP21.1■□□□□ 0.97
PRPF38B-202ENST00000370022 USP21Q9UK80 565 aa21.1■□□□□ 0.97
PRPF38B-202ENST00000370022 FBLN1P23142 703 aa21.09■□□□□ 0.97
PRPF38B-202ENST00000370022 AMPHP49418 695 aa21.09■□□□□ 0.97
PRPF38B-202ENST00000370022 UNC5CLQ8IV45 518 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms