RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 BRD4O60885 1362 aaPredicted RBP23.32■■□□□ 1.32
UBE3D-203ENST00000369747 USP6P35125 1406 aa23.32■■□□□ 1.32
UBE3D-203ENST00000369747 CGNL1Q0VF96 1302 aa23.31■■□□□ 1.32
UBE3D-203ENST00000369747 FOXO3O43524 673 aa23.31■■□□□ 1.32
UBE3D-203ENST00000369747 EDC4Q6P2E9 1401 aaKnown RBP23.31■■□□□ 1.32
UBE3D-203ENST00000369747 PNISRQ8TF01 805 aaKnown RBP23.3■■□□□ 1.32
UBE3D-203ENST00000369747 FYB1O15117 783 aa23.29■■□□□ 1.32
UBE3D-203ENST00000369747 NPC1L1Q9UHC9 1359 aa23.28■■□□□ 1.32
UBE3D-203ENST00000369747 FKBP8Q14318 412 aa23.28■■□□□ 1.32
UBE3D-203ENST00000369747 NRKQ7Z2Y5 1582 aa23.28■■□□□ 1.32
UBE3D-203ENST00000369747 SSH2Q76I76 1423 aa23.28■■□□□ 1.32
UBE3D-203ENST00000369747 GGNBP2Q9H3C7 697 aa23.27■■□□□ 1.32
UBE3D-203ENST00000369747 TTC21BQ7Z4L5 1316 aa23.27■■□□□ 1.32
UBE3D-203ENST00000369747 XPCQ01831 940 aaPredicted RBP23.27■■□□□ 1.32
UBE3D-203ENST00000369747 BRINP3Q76B58 766 aa23.27■■□□□ 1.32
UBE3D-203ENST00000369747 DDX17Q92841 729 aaKnown RBP23.27■■□□□ 1.32
UBE3D-203ENST00000369747 KIF1AQ12756 1690 aa23.26■■□□□ 1.31
UBE3D-203ENST00000369747 PSME1Q06323 249 aa23.26■■□□□ 1.31
UBE3D-203ENST00000369747 NME9Q86XW9 330 aa23.26■■□□□ 1.31
UBE3D-203ENST00000369747 ZRANB1Q9UGI0 708 aa23.24■■□□□ 1.31
UBE3D-203ENST00000369747 NLRP13Q86W25 1043 aa23.23■■□□□ 1.31
UBE3D-203ENST00000369747 KIF20BQ96Q89 1820 aa23.23■■□□□ 1.31
UBE3D-203ENST00000369747 NEFLP07196 543 aa23.23■■□□□ 1.31
UBE3D-203ENST00000369747 PAK3O75914 559 aaPredicted RBP23.22■■□□□ 1.31
UBE3D-203ENST00000369747 NSD2O96028 1365 aa23.22■■□□□ 1.31
UBE3D-203ENST00000369747 TNNT2P45379 298 aaPredicted RBP23.2■■□□□ 1.3
UBE3D-203ENST00000369747 KRT28Q7Z3Y7 464 aa23.2■■□□□ 1.3
UBE3D-203ENST00000369747 MORC1Q86VD1 984 aa23.2■■□□□ 1.3
UBE3D-203ENST00000369747 TTC21AQ8NDW8 1320 aa23.19■■□□□ 1.3
UBE3D-203ENST00000369747 NPHP3Q7Z494 1330 aa23.18■■□□□ 1.3
UBE3D-203ENST00000369747 PIK3C2AO00443 1686 aa23.18■■□□□ 1.3
UBE3D-203ENST00000369747 ANKRD26Q9UPS8 1709 aa23.18■■□□□ 1.3
UBE3D-203ENST00000369747 CERKQ8TCT0 537 aa23.18■■□□□ 1.3
UBE3D-203ENST00000369747 NUTM2GQ5VZR2 741 aa23.17■■□□□ 1.3
UBE3D-203ENST00000369747 ABTB2Q8N961 1025 aa23.16■■□□□ 1.3
UBE3D-203ENST00000369747 TRPM3Q9HCF6 1732 aaPredicted RBP23.16■■□□□ 1.3
UBE3D-203ENST00000369747 ROBO1Q9Y6N7 1651 aa23.16■■□□□ 1.3
UBE3D-203ENST00000369747 PPP2R1AP30153 589 aa23.15■■□□□ 1.3
UBE3D-203ENST00000369747 COG3Q96JB2 828 aa23.15■■□□□ 1.3
UBE3D-203ENST00000369747 PXDNQ92626 1479 aa23.15■■□□□ 1.3
UBE3D-203ENST00000369747 TOM1O60784 492 aa23.14■■□□□ 1.3
UBE3D-203ENST00000369747 FBLN1P23142 703 aa23.14■■□□□ 1.3
UBE3D-203ENST00000369747 UBAP1LF5GYI3 381 aa23.14■■□□□ 1.29
UBE3D-203ENST00000369747 OVOS2A0A0J9YW53 1432 aa23.13■■□□□ 1.29
UBE3D-203ENST00000369747 OVOS2Q6IE36 1432 aa23.13■■□□□ 1.29
UBE3D-203ENST00000369747 NLRP6P59044 892 aa23.13■■□□□ 1.29
UBE3D-203ENST00000369747 IQSEC2Q5JU85 1478 aa23.12■■□□□ 1.29
UBE3D-203ENST00000369747 LMOD2Q6P5Q4 547 aa23.12■■□□□ 1.29
UBE3D-203ENST00000369747 PIP4K2BP78356 416 aa23.12■■□□□ 1.29
UBE3D-203ENST00000369747 NHSL1Q5SYE7 1610 aa23.11■■□□□ 1.29
UBE3D-203ENST00000369747 SOS2Q07890 1332 aaPredicted RBP23.1■■□□□ 1.29
UBE3D-203ENST00000369747 SMG6Q86US8 1419 aaKnown RBP23.1■■□□□ 1.29
UBE3D-203ENST00000369747 USP31Q70CQ4 1352 aa23.1■■□□□ 1.29
UBE3D-203ENST00000369747 MARF1Q9Y4F3 1742 aaKnown RBP23.1■■□□□ 1.29
UBE3D-203ENST00000369747 SOX12O15370 315 aa23.08■■□□□ 1.29
UBE3D-203ENST00000369747 ALS2Q96Q42 1657 aa23.08■■□□□ 1.29
UBE3D-203ENST00000369747 SBNO1A3KN83 1393 aa23.08■■□□□ 1.29
UBE3D-203ENST00000369747 PLEKHG5O94827 1062 aa23.08■■□□□ 1.28
UBE3D-203ENST00000369747 SPATA31A3Q5VYP0 1347 aa23.07■■□□□ 1.28
UBE3D-203ENST00000369747 TNS3Q68CZ2 1445 aa23.06■■□□□ 1.28
UBE3D-203ENST00000369747 USP54Q70EL1 1684 aa23.05■■□□□ 1.28
UBE3D-203ENST00000369747 MTHFSP49914 203 aa23.05■■□□□ 1.28
UBE3D-203ENST00000369747 INSRP06213 1382 aa23.04■■□□□ 1.28
UBE3D-203ENST00000369747 SENP3-EIF4A1A0A087X0R7 540 aa23.04■■□□□ 1.28
UBE3D-203ENST00000369747 RRS1Q15050 365 aaKnown RBP23.04■■□□□ 1.28
UBE3D-203ENST00000369747 MAP2P11137 1827 aaKnown RBP23.03■■□□□ 1.28
UBE3D-203ENST00000369747 POLKQ9UBT6 870 aa23.03■■□□□ 1.28
UBE3D-203ENST00000369747 NUDCQ9Y266 331 aa23.03■■□□□ 1.28
UBE3D-203ENST00000369747 AHDC1Q5TGY3 1603 aaPredicted RBP23.03■■□□□ 1.28
UBE3D-203ENST00000369747 BLMP54132 1417 aaPredicted RBP23.02■■□□□ 1.28
UBE3D-203ENST00000369747 EMILIN1Q9Y6C2 1016 aa23.02■■□□□ 1.28
UBE3D-203ENST00000369747 AATKQ6ZMQ8 1374 aa23.01■■□□□ 1.27
UBE3D-203ENST00000369747 PELP1Q8IZL8 1130 aaKnown RBP23.01■■□□□ 1.27
UBE3D-203ENST00000369747 PPM1GO15355 546 aaPredicted RBP23■■□□□ 1.27
UBE3D-203ENST00000369747 IRX6P78412 446 aaPredicted RBP23■■□□□ 1.27
UBE3D-203ENST00000369747 CABLES1Q8TDN4 633 aa23■■□□□ 1.27
UBE3D-203ENST00000369747 MED1Q15648 1581 aaPredicted RBP22.99■■□□□ 1.27
UBE3D-203ENST00000369747 USP19O94966 1318 aa22.99■■□□□ 1.27
UBE3D-203ENST00000369747 ARHGEF10O15013 1369 aa22.99■■□□□ 1.27
UBE3D-203ENST00000369747 GCP02774 474 aa22.98■■□□□ 1.27
UBE3D-203ENST00000369747 PHLPP1O60346 1717 aa22.97■■□□□ 1.27
UBE3D-203ENST00000369747 SLIT3O75094 1523 aa22.96■■□□□ 1.27
UBE3D-203ENST00000369747 NFAT5O94916 1531 aa22.96■■□□□ 1.27
UBE3D-203ENST00000369747 MAP3K19Q56UN5 1328 aa22.96■■□□□ 1.27
UBE3D-203ENST00000369747 LRRC59Q96AG4 307 aaKnown RBP22.96■■□□□ 1.27
UBE3D-203ENST00000369747 ERICH6BQ5W0A0 696 aa22.95■■□□□ 1.26
UBE3D-203ENST00000369747 COL16A1Q07092 1604 aaPredicted RBP22.95■■□□□ 1.26
UBE3D-203ENST00000369747 KCNH5Q8NCM2 988 aa22.94■■□□□ 1.26
UBE3D-203ENST00000369747 PEAK1Q9H792 1746 aa22.93■■□□□ 1.26
UBE3D-203ENST00000369747 CRYBG1Q9Y4K1 1723 aa22.93■■□□□ 1.26
UBE3D-203ENST00000369747 PHRF1Q9P1Y6 1649 aaKnown RBP22.92■■□□□ 1.26
UBE3D-203ENST00000369747 PNPLA6Q8IY17 1366 aa22.92■■□□□ 1.26
UBE3D-203ENST00000369747 CFAP53Q96M91 514 aa22.91■■□□□ 1.26
UBE3D-203ENST00000369747 ADAMTS8Q9UP79 889 aa22.91■■□□□ 1.26
UBE3D-203ENST00000369747 LTN1O94822 1766 aa22.91■■□□□ 1.26
UBE3D-203ENST00000369747 COL3A1P02461 1466 aaPredicted RBP22.91■■□□□ 1.26
UBE3D-203ENST00000369747 ZC3H6P61129 1189 aaKnown RBP22.9■■□□□ 1.26
UBE3D-203ENST00000369747 CDK12Q9NYV4 1490 aaPredicted RBP22.9■■□□□ 1.26
UBE3D-203ENST00000369747 RNF123Q5XPI4 1314 aa22.9■■□□□ 1.26
UBE3D-203ENST00000369747 ZBTB7CA1YPR0 619 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms