RNA–Protein interactions for RNA: ENST00000369522.7

SYCP1-202, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-202ENST00000369522 SSH1Q8WYL5 1049 aa9.73□□□□□ -0.85
SYCP1-202ENST00000369522 FAM13BQ9NYF5 915 aa9.73□□□□□ -0.85
SYCP1-202ENST00000369522 CIZ1Q9ULV3 898 aaPredicted RBP9.73□□□□□ -0.85
SYCP1-202ENST00000369522 CT47B1P0C2W7 299 aaPredicted RBP9.73□□□□□ -0.85
SYCP1-202ENST00000369522 NUCB1Q02818 461 aa9.73□□□□□ -0.85
SYCP1-202ENST00000369522 KIAA1211Q6ZU35 1233 aa9.73□□□□□ -0.85
SYCP1-202ENST00000369522 ZBTB40Q9NUA8 1239 aa9.73□□□□□ -0.85
SYCP1-202ENST00000369522 DDX19BQ9UMR2 479 aa9.73□□□□□ -0.85
SYCP1-202ENST00000369522 SPAG9O60271 1321 aaKnown RBP9.73□□□□□ -0.85
SYCP1-202ENST00000369522 COL3A1P02461 1466 aaPredicted RBP9.73□□□□□ -0.85
SYCP1-202ENST00000369522 EXOSC9Q06265 439 aaKnown RBP9.73□□□□□ -0.85
SYCP1-202ENST00000369522 EFCAB2Q5VUJ9 269 aa9.73□□□□□ -0.85
SYCP1-202ENST00000369522 ATF7IPQ6VMQ6 1270 aa9.73□□□□□ -0.85
SYCP1-202ENST00000369522 ITPRIPQ8IWB1 547 aa9.73□□□□□ -0.85
SYCP1-202ENST00000369522 SMC4Q9NTJ3 1288 aa9.73□□□□□ -0.85
SYCP1-202ENST00000369522 AFAP1Q8N556 730 aa9.72□□□□□ -0.85
SYCP1-202ENST00000369522 TMEM57Q8N5G2 664 aa9.72□□□□□ -0.85
SYCP1-202ENST00000369522 ARHGEF28Q8N1W1 1705 aaKnown RBP9.72□□□□□ -0.85
SYCP1-202ENST00000369522 MSNP26038 577 aaKnown RBP9.72□□□□□ -0.85
SYCP1-202ENST00000369522 PLEKHF1Q96S99 279 aa9.72□□□□□ -0.85
SYCP1-202ENST00000369522 PPP1R9BQ96SB3 815 aa9.72□□□□□ -0.85
SYCP1-202ENST00000369522 ARHGAP31Q2M1Z3 1444 aa9.72□□□□□ -0.85
SYCP1-202ENST00000369522 TULP4Q9NRJ4 1543 aa9.72□□□□□ -0.85
SYCP1-202ENST00000369522 NOB1Q9ULX3 412 aaKnown RBP9.72□□□□□ -0.85
SYCP1-202ENST00000369522 TRIM35Q9UPQ4 493 aa9.72□□□□□ -0.85
SYCP1-202ENST00000369522 ARAP3Q8WWN8 1544 aa9.71□□□□□ -0.85
SYCP1-202ENST00000369522 TPM2P07951 284 aa9.71□□□□□ -0.85
SYCP1-202ENST00000369522 GBP4Q96PP9 640 aa9.71□□□□□ -0.85
SYCP1-202ENST00000369522 MED14O60244 1454 aa9.71□□□□□ -0.85
SYCP1-202ENST00000369522 ANKRD26Q9UPS8 1709 aa9.71□□□□□ -0.86
SYCP1-202ENST00000369522 A0A0U1RQG5 324 aaPredicted RBP9.71□□□□□ -0.86
SYCP1-202ENST00000369522 SKOR2Q2VWA4 1001 aaPredicted RBP9.71□□□□□ -0.86
SYCP1-202ENST00000369522 ABCA9Q8IUA7 1624 aa9.7□□□□□ -0.86
SYCP1-202ENST00000369522 U2AF1L5P0DN76 240 aaPredicted RBP9.7□□□□□ -0.86
SYCP1-202ENST00000369522 U2AF1Q01081 240 aaKnown RBP eCLIP9.7□□□□□ -0.86
SYCP1-202ENST00000369522 CFAP53Q96M91 514 aa9.7□□□□□ -0.86
SYCP1-202ENST00000369522 ABCC11Q96J66 1382 aa9.7□□□□□ -0.86
SYCP1-202ENST00000369522 CLEC17AQ6ZS10 378 aa9.7□□□□□ -0.86
SYCP1-202ENST00000369522 LNPKQ9C0E8 428 aa9.7□□□□□ -0.86
SYCP1-202ENST00000369522 IBTKQ9P2D0 1353 aaPredicted RBP9.7□□□□□ -0.86
SYCP1-202ENST00000369522 GLI2P10070 1586 aa9.69□□□□□ -0.86
SYCP1-202ENST00000369522 CCDC173Q0VFZ6 552 aa9.69□□□□□ -0.86
SYCP1-202ENST00000369522 CHD1LQ86WJ1 897 aa9.69□□□□□ -0.86
SYCP1-202ENST00000369522 PODXL2Q9NZ53 605 aa9.69□□□□□ -0.86
SYCP1-202ENST00000369522 SSFA2P28290 1259 aa9.69□□□□□ -0.86
SYCP1-202ENST00000369522 BMP2KLQ5H9B9 411 aa9.69□□□□□ -0.86
SYCP1-202ENST00000369522 RBM42Q9BTD8 480 aaKnown RBP9.69□□□□□ -0.86
SYCP1-202ENST00000369522 TRAK1Q9UPV9 953 aa9.69□□□□□ -0.86
SYCP1-202ENST00000369522 FANCAO15360 1455 aa9.69□□□□□ -0.86
SYCP1-202ENST00000369522 R3HCC1Q9Y3T6 440 aaKnown RBP9.69□□□□□ -0.86
SYCP1-202ENST00000369522 PPIP5K1Q6PFW1 1433 aa9.69□□□□□ -0.86
SYCP1-202ENST00000369522 NSD2O96028 1365 aa9.68□□□□□ -0.86
SYCP1-202ENST00000369522 ANKRD36BQ8N2N9 1353 aa9.68□□□□□ -0.86
SYCP1-202ENST00000369522 K7ELQ4 463 aaPredicted RBP9.68□□□□□ -0.86
SYCP1-202ENST00000369522 TMPOP42166 694 aaKnown RBP9.68□□□□□ -0.86
SYCP1-202ENST00000369522 GAS2L2Q8NHY3 880 aa9.68□□□□□ -0.86
SYCP1-202ENST00000369522 PTMSP20962 102 aa9.68□□□□□ -0.86
SYCP1-202ENST00000369522 NASPP49321 788 aaPredicted RBP9.68□□□□□ -0.86
SYCP1-202ENST00000369522 PDCL3Q9H2J4 239 aa9.68□□□□□ -0.86
SYCP1-202ENST00000369522 LMTK2Q8IWU2 1503 aa9.67□□□□□ -0.86
SYCP1-202ENST00000369522 ZSCAN30Q86W11 494 aa9.67□□□□□ -0.86
SYCP1-202ENST00000369522 DDX49Q9Y6V7 483 aaKnown RBP9.67□□□□□ -0.86
SYCP1-202ENST00000369522 KNDC1Q76NI1 1749 aa9.67□□□□□ -0.86
SYCP1-202ENST00000369522 CAMSAP1Q5T5Y3 1602 aa9.67□□□□□ -0.86
SYCP1-202ENST00000369522 REREQ9P2R6 1566 aa9.67□□□□□ -0.86
SYCP1-202ENST00000369522 TBC1D9Q6ZT07 1266 aa9.67□□□□□ -0.86
SYCP1-202ENST00000369522 IL16Q14005 1332 aa9.67□□□□□ -0.86
SYCP1-202ENST00000369522 GOLGA6L22H0YM25 854 aa9.66□□□□□ -0.86
SYCP1-202ENST00000369522 KIF3BO15066 747 aa9.66□□□□□ -0.86
SYCP1-202ENST00000369522 OFD1O75665 1012 aa9.66□□□□□ -0.86
SYCP1-202ENST00000369522 KLHL40Q2TBA0 621 aa9.66□□□□□ -0.86
SYCP1-202ENST00000369522 KIDINS220Q9ULH0 1771 aa9.66□□□□□ -0.86
SYCP1-202ENST00000369522 CFAP65Q6ZU64 1925 aaKnown RBP9.66□□□□□ -0.86
SYCP1-202ENST00000369522 UHRF1BP1LA0JNW5 1464 aa9.66□□□□□ -0.86
SYCP1-202ENST00000369522 RIPK4P57078 832 aa9.66□□□□□ -0.86
SYCP1-202ENST00000369522 C14orf93Q9H972 538 aaKnown RBP9.66□□□□□ -0.86
SYCP1-202ENST00000369522 KIF16BQ96L93 1317 aa9.66□□□□□ -0.86
SYCP1-202ENST00000369522 BAG4O95429 457 aaKnown RBP9.66□□□□□ -0.86
SYCP1-202ENST00000369522 TPRNQ4KMQ1 711 aa9.65□□□□□ -0.86
SYCP1-202ENST00000369522 TMEM132EQ6IEE7 984 aa9.65□□□□□ -0.86
SYCP1-202ENST00000369522 SENP3Q9H4L4 574 aaPredicted RBP9.65□□□□□ -0.86
SYCP1-202ENST00000369522 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.65□□□□□ -0.86
SYCP1-202ENST00000369522 PLEKHG5O94827 1062 aa9.65□□□□□ -0.87
SYCP1-202ENST00000369522 ZNF445P59923 1031 aa9.65□□□□□ -0.87
SYCP1-202ENST00000369522 PRDM10Q9NQV6 1147 aa9.65□□□□□ -0.87
SYCP1-202ENST00000369522 LRRC7Q96NW7 1537 aa9.64□□□□□ -0.87
SYCP1-202ENST00000369522 ZBTB7BO15156 539 aaPredicted RBP9.64□□□□□ -0.87
SYCP1-202ENST00000369522 PIK3R4Q99570 1358 aa9.64□□□□□ -0.87
SYCP1-202ENST00000369522 CDC42BPGQ6DT37 1551 aa9.64□□□□□ -0.87
SYCP1-202ENST00000369522 A0A1W2PP64 1363 aa9.64□□□□□ -0.87
SYCP1-202ENST00000369522 CYP2E1P05181 493 aaPredicted RBP9.64□□□□□ -0.87
SYCP1-202ENST00000369522 ALDH1L2Q3SY69 923 aa9.64□□□□□ -0.87
SYCP1-202ENST00000369522 SIRT2Q8IXJ6 389 aa9.64□□□□□ -0.87
SYCP1-202ENST00000369522 PTCH1Q13635 1447 aa9.63□□□□□ -0.87
SYCP1-202ENST00000369522 TERF1P54274 439 aa9.63□□□□□ -0.87
SYCP1-202ENST00000369522 XPCQ01831 940 aaPredicted RBP9.63□□□□□ -0.87
SYCP1-202ENST00000369522 ANKRD45Q5TZF3 282 aa9.63□□□□□ -0.87
SYCP1-202ENST00000369522 U2SURPO15042 1029 aaKnown RBP9.63□□□□□ -0.87
SYCP1-202ENST00000369522 PUS7Q96PZ0 661 aaKnown RBP9.63□□□□□ -0.87
SYCP1-202ENST00000369522 C1orf115Q9H7X2 142 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms