RNA–Protein interactions for RNA: ENST00000369518.1

SYCP1-201, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYCP1, Length 3,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-201ENST00000369518 BLMP54132 1417 aaPredicted RBP8.28□□□□□ -1.08
SYCP1-201ENST00000369518 TULP4Q9NRJ4 1543 aa8.28□□□□□ -1.08
SYCP1-201ENST00000369518 ADGRB1O14514 1584 aa8.28□□□□□ -1.08
SYCP1-201ENST00000369518 TAF7LQ5H9L4 462 aa8.27□□□□□ -1.08
SYCP1-201ENST00000369518 YTHDC2Q9H6S0 1430 aaKnown RBP8.27□□□□□ -1.09
SYCP1-201ENST00000369518 CDK11BP21127 795 aaKnown RBP8.27□□□□□ -1.09
SYCP1-201ENST00000369518 ONECUT3O60422 494 aaPredicted RBP8.26□□□□□ -1.09
SYCP1-201ENST00000369518 ZNF428Q96B54 188 aa8.26□□□□□ -1.09
SYCP1-201ENST00000369518 PARP4Q9UKK3 1724 aaKnown RBP8.26□□□□□ -1.09
SYCP1-201ENST00000369518 PARD3Q8TEW0 1356 aa8.25□□□□□ -1.09
SYCP1-201ENST00000369518 RALGAPBQ86X10 1494 aa8.25□□□□□ -1.09
SYCP1-201ENST00000369518 BRD2P25440 801 aaKnown RBP8.24□□□□□ -1.09
SYCP1-201ENST00000369518 KDM2AQ9Y2K7 1162 aa8.24□□□□□ -1.09
SYCP1-201ENST00000369518 SPATA31A3Q5VYP0 1347 aa8.24□□□□□ -1.09
SYCP1-201ENST00000369518 C11orf95C9JLR9 678 aaPredicted RBP8.24□□□□□ -1.09
SYCP1-201ENST00000369518 QTRT2Q9H974 415 aaKnown RBP8.24□□□□□ -1.09
SYCP1-201ENST00000369518 DEKP35659 375 aaKnown RBP8.23□□□□□ -1.09
SYCP1-201ENST00000369518 LMO7Q8WWI1 1683 aa8.23□□□□□ -1.09
SYCP1-201ENST00000369518 DHX57Q6P158 1386 aaKnown RBP8.23□□□□□ -1.09
SYCP1-201ENST00000369518 CHGAP10645 457 aaKnown RBP8.23□□□□□ -1.09
SYCP1-201ENST00000369518 PSME1Q06323 249 aa8.23□□□□□ -1.09
SYCP1-201ENST00000369518 ZNF326Q5BKZ1 582 aaKnown RBP8.23□□□□□ -1.09
SYCP1-201ENST00000369518 PRDM10Q9NQV6 1147 aa8.23□□□□□ -1.09
SYCP1-201ENST00000369518 QSER1Q2KHR3 1735 aa8.22□□□□□ -1.09
SYCP1-201ENST00000369518 VPS72Q15906 364 aa8.22□□□□□ -1.09
SYCP1-201ENST00000369518 C14orf93Q9H972 538 aaKnown RBP8.22□□□□□ -1.09
SYCP1-201ENST00000369518 QRICH2Q9H0J4 1663 aa8.22□□□□□ -1.09
SYCP1-201ENST00000369518 USP21Q9UK80 565 aa8.22□□□□□ -1.09
SYCP1-201ENST00000369518 NUP188Q5SRE5 1749 aa8.21□□□□□ -1.09
SYCP1-201ENST00000369518 COL24A1Q17RW2 1714 aa8.21□□□□□ -1.1
SYCP1-201ENST00000369518 UNC5CLQ8IV45 518 aa8.21□□□□□ -1.1
SYCP1-201ENST00000369518 BRPF3Q9ULD4 1205 aa8.21□□□□□ -1.1
SYCP1-201ENST00000369518 NRKQ7Z2Y5 1582 aa8.2□□□□□ -1.1
SYCP1-201ENST00000369518 TRPM1Q7Z4N2 1603 aa8.2□□□□□ -1.1
SYCP1-201ENST00000369518 PEAK1Q9H792 1746 aa8.2□□□□□ -1.1
SYCP1-201ENST00000369518 GJD4Q96KN9 370 aaPredicted RBP8.2□□□□□ -1.1
SYCP1-201ENST00000369518 AKAP12Q02952 1782 aa8.19□□□□□ -1.1
SYCP1-201ENST00000369518 ZNF526Q8TF50 670 aaPredicted RBP8.19□□□□□ -1.1
SYCP1-201ENST00000369518 ZRANB1Q9UGI0 708 aa8.19□□□□□ -1.1
SYCP1-201ENST00000369518 BCL9O00512 1426 aa8.19□□□□□ -1.1
SYCP1-201ENST00000369518 ANP32EQ9BTT0 268 aa8.18□□□□□ -1.1
SYCP1-201ENST00000369518 SBF2Q86WG5 1849 aa8.18□□□□□ -1.1
SYCP1-201ENST00000369518 SLIT3O75094 1523 aa8.18□□□□□ -1.1
SYCP1-201ENST00000369518 FAM208AQ9UK61 1670 aaKnown RBP8.17□□□□□ -1.1
SYCP1-201ENST00000369518 TRIM52Q96A61 297 aa8.17□□□□□ -1.1
SYCP1-201ENST00000369518 C8orf37Q96NL8 207 aa8.17□□□□□ -1.1
SYCP1-201ENST00000369518 SLC4A1APQ9BWU0 796 aaKnown RBP8.17□□□□□ -1.1
SYCP1-201ENST00000369518 POLR3AO14802 1390 aaPredicted RBP8.17□□□□□ -1.1
SYCP1-201ENST00000369518 RBM33Q96EV2 1170 aaKnown RBP8.16□□□□□ -1.1
SYCP1-201ENST00000369518 CASZ1Q86V15 1759 aa8.16□□□□□ -1.1
SYCP1-201ENST00000369518 CPDO75976 1380 aa8.16□□□□□ -1.1
SYCP1-201ENST00000369518 COL18A1P39060 1754 aa8.16□□□□□ -1.1
SYCP1-201ENST00000369518 RBM10P98175 930 aaKnown RBP8.16□□□□□ -1.1
SYCP1-201ENST00000369518 ORAI2Q96SN7 254 aa8.15□□□□□ -1.1
SYCP1-201ENST00000369518 ADGRF5Q8IZF2 1346 aa8.15□□□□□ -1.1
SYCP1-201ENST00000369518 NUTM2BA6NNL0 878 aaPredicted RBP8.15□□□□□ -1.1
SYCP1-201ENST00000369518 NUTM2EB1AL46 878 aaPredicted RBP8.15□□□□□ -1.1
SYCP1-201ENST00000369518 NUTM2AQ8IVF1 878 aaPredicted RBP8.15□□□□□ -1.1
SYCP1-201ENST00000369518 NAP1L5Q96NT1 182 aaPredicted RBP8.15□□□□□ -1.1
SYCP1-201ENST00000369518 PHF8Q9UPP1 1060 aa8.15□□□□□ -1.11
SYCP1-201ENST00000369518 MPHOSPH9Q99550 1183 aa8.14□□□□□ -1.11
SYCP1-201ENST00000369518 MON2Q7Z3U7 1717 aa8.14□□□□□ -1.11
SYCP1-201ENST00000369518 GPRASP1Q5JY77 1395 aa8.13□□□□□ -1.11
SYCP1-201ENST00000369518 KRT28Q7Z3Y7 464 aa8.13□□□□□ -1.11
SYCP1-201ENST00000369518 ESCO1Q5FWF5 840 aa8.13□□□□□ -1.11
SYCP1-201ENST00000369518 CAMTA1Q9Y6Y1 1673 aa8.12□□□□□ -1.11
SYCP1-201ENST00000369518 LRRC37A3O60309 1634 aa8.12□□□□□ -1.11
SYCP1-201ENST00000369518 NUTM2DQ5VT03 806 aaPredicted RBP8.12□□□□□ -1.11
SYCP1-201ENST00000369518 PLEKHH1Q9ULM0 1364 aa8.12□□□□□ -1.11
SYCP1-201ENST00000369518 BARGINQ6ZT62 677 aa8.12□□□□□ -1.11
SYCP1-201ENST00000369518 THRAP3Q9Y2W1 955 aaKnown RBP8.12□□□□□ -1.11
SYCP1-201ENST00000369518 USP19O94966 1318 aa8.11□□□□□ -1.11
SYCP1-201ENST00000369518 SPATA31A5Q5VU36 1347 aa8.11□□□□□ -1.11
SYCP1-201ENST00000369518 SPATA31A7Q8IWB4 1347 aa8.11□□□□□ -1.11
SYCP1-201ENST00000369518 AAMPQ13685 434 aa8.11□□□□□ -1.11
SYCP1-201ENST00000369518 AATKQ6ZMQ8 1374 aa8.11□□□□□ -1.11
SYCP1-201ENST00000369518 NHSQ6T4R5 1651 aa8.11□□□□□ -1.11
SYCP1-201ENST00000369518 ZBTB22O15209 634 aa8.11□□□□□ -1.11
SYCP1-201ENST00000369518 BAG6P46379 1132 aa8.1□□□□□ -1.11
SYCP1-201ENST00000369518 SF3B2Q13435 895 aaKnown RBP8.1□□□□□ -1.11
SYCP1-201ENST00000369518 TMED8Q6PL24 325 aaPredicted RBP8.1□□□□□ -1.11
SYCP1-201ENST00000369518 PLEKHG3A1L390 1219 aa8.09□□□□□ -1.11
SYCP1-201ENST00000369518 KRT27Q7Z3Y8 459 aa8.09□□□□□ -1.11
SYCP1-201ENST00000369518 ADAMTS2O95450 1211 aa8.09□□□□□ -1.11
SYCP1-201ENST00000369518 ZFP91Q96JP5 570 aaPredicted RBP8.09□□□□□ -1.11
SYCP1-201ENST00000369518 NINLQ9Y2I6 1382 aa8.08□□□□□ -1.12
SYCP1-201ENST00000369518 PAPPAQ13219 1627 aa8.08□□□□□ -1.12
SYCP1-201ENST00000369518 PIK3C2AO00443 1686 aa8.08□□□□□ -1.12
SYCP1-201ENST00000369518 WASLO00401 505 aaPredicted RBP8.08□□□□□ -1.12
SYCP1-201ENST00000369518 SEPT12Q8IYM1 358 aa8.08□□□□□ -1.12
SYCP1-201ENST00000369518 CNKSR2Q8WXI2 1034 aa8.08□□□□□ -1.12
SYCP1-201ENST00000369518 SSH2Q76I76 1423 aa8.07□□□□□ -1.12
SYCP1-201ENST00000369518 SENP3Q9H4L4 574 aaPredicted RBP8.07□□□□□ -1.12
SYCP1-201ENST00000369518 SBNO2Q9Y2G9 1366 aa8.07□□□□□ -1.12
SYCP1-201ENST00000369518 SPATA31A1Q5TZJ5 1347 aa8.06□□□□□ -1.12
SYCP1-201ENST00000369518 FOXO3O43524 673 aa8.06□□□□□ -1.12
SYCP1-201ENST00000369518 DDX17Q92841 729 aaKnown RBP8.06□□□□□ -1.12
SYCP1-201ENST00000369518 CDCA7Q9BWT1 371 aaPredicted RBP8.06□□□□□ -1.12
SYCP1-201ENST00000369518 FAM196AQ6ZSG2 479 aa8.05□□□□□ -1.12
SYCP1-201ENST00000369518 WAPLQ7Z5K2 1190 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms