RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 ATAD2Q6PL18 1390 aa14.74□□□□□ -0.05
RAB39B-201ENST00000369454 RICTORQ6R327 1708 aa14.74□□□□□ -0.05
RAB39B-201ENST00000369454 SSH1Q8WYL5 1049 aa14.74□□□□□ -0.05
RAB39B-201ENST00000369454 PLEKHF1Q96S99 279 aa14.74□□□□□ -0.05
RAB39B-201ENST00000369454 PRKAR2BP31323 418 aa14.73□□□□□ -0.05
RAB39B-201ENST00000369454 ZKSCAN2Q63HK3 967 aa14.73□□□□□ -0.05
RAB39B-201ENST00000369454 EMILIN1Q9Y6C2 1016 aa14.73□□□□□ -0.05
RAB39B-201ENST00000369454 NSD2O96028 1365 aa14.73□□□□□ -0.05
RAB39B-201ENST00000369454 PTPRMP28827 1452 aa14.73□□□□□ -0.05
RAB39B-201ENST00000369454 IQSEC2Q5JU85 1478 aa14.73□□□□□ -0.05
RAB39B-201ENST00000369454 SOX12O15370 315 aa14.73□□□□□ -0.05
RAB39B-201ENST00000369454 PUS7Q96PZ0 661 aaKnown RBP14.73□□□□□ -0.05
RAB39B-201ENST00000369454 CCDC27Q2M243 656 aa14.72□□□□□ -0.05
RAB39B-201ENST00000369454 NME9Q86XW9 330 aa14.72□□□□□ -0.05
RAB39B-201ENST00000369454 DZIP1LQ8IYY4 767 aaKnown RBP14.72□□□□□ -0.05
RAB39B-201ENST00000369454 PDZRN3Q9UPQ7 1066 aa14.72□□□□□ -0.05
RAB39B-201ENST00000369454 NOB1Q9ULX3 412 aaKnown RBP14.71□□□□□ -0.05
RAB39B-201ENST00000369454 RRS1Q15050 365 aaKnown RBP14.71□□□□□ -0.05
RAB39B-201ENST00000369454 TRIM27P14373 513 aa14.71□□□□□ -0.06
RAB39B-201ENST00000369454 PMFBP1Q8TBY8 1022 aa14.71□□□□□ -0.06
RAB39B-201ENST00000369454 MVPQ14764 893 aaKnown RBP14.7□□□□□ -0.06
RAB39B-201ENST00000369454 PREX1Q8TCU6 1659 aa14.7□□□□□ -0.06
RAB39B-201ENST00000369454 PHACTR3Q96KR7 559 aa14.7□□□□□ -0.06
RAB39B-201ENST00000369454 POLKQ9UBT6 870 aa14.7□□□□□ -0.06
RAB39B-201ENST00000369454 TMEM131LA2VDJ0 1609 aa14.7□□□□□ -0.06
RAB39B-201ENST00000369454 CD163L1Q9NR16 1453 aa14.69□□□□□ -0.06
RAB39B-201ENST00000369454 RWDD1Q9H446 243 aaPredicted RBP14.69□□□□□ -0.06
RAB39B-201ENST00000369454 ZFYVE9O95405 1425 aa14.68□□□□□ -0.06
RAB39B-201ENST00000369454 ALKQ9UM73 1620 aa14.68□□□□□ -0.06
RAB39B-201ENST00000369454 RIMS2Q9UQ26 1411 aa14.67□□□□□ -0.06
RAB39B-201ENST00000369454 TMEM57Q8N5G2 664 aa14.67□□□□□ -0.06
RAB39B-201ENST00000369454 NINLQ9Y2I6 1382 aa14.67□□□□□ -0.06
RAB39B-201ENST00000369454 NFKBIBQ15653 356 aa14.66□□□□□ -0.06
RAB39B-201ENST00000369454 SLKQ9H2G2 1235 aaPredicted RBP14.66□□□□□ -0.06
RAB39B-201ENST00000369454 SPRYD3Q8NCJ5 442 aa14.66□□□□□ -0.06
RAB39B-201ENST00000369454 METP08581 1390 aa14.66□□□□□ -0.06
RAB39B-201ENST00000369454 ATF7IPQ6VMQ6 1270 aa14.66□□□□□ -0.06
RAB39B-201ENST00000369454 DCTN1Q14203 1278 aa14.65□□□□□ -0.06
RAB39B-201ENST00000369454 WASLO00401 505 aaPredicted RBP14.65□□□□□ -0.06
RAB39B-201ENST00000369454 NUDT16Q96DE0 195 aaKnown RBP14.65□□□□□ -0.06
RAB39B-201ENST00000369454 FAM83GA6ND36 823 aa14.64□□□□□ -0.07
RAB39B-201ENST00000369454 USP32Q8NFA0 1604 aa14.64□□□□□ -0.07
RAB39B-201ENST00000369454 C1orf115Q9H7X2 142 aa14.64□□□□□ -0.07
RAB39B-201ENST00000369454 RSPH6AQ9H0K4 717 aa14.63□□□□□ -0.07
RAB39B-201ENST00000369454 ARHGEF40Q8TER5 1519 aa14.63□□□□□ -0.07
RAB39B-201ENST00000369454 A2ML1A8K2U0 1454 aa14.63□□□□□ -0.07
RAB39B-201ENST00000369454 USP19O94966 1318 aa14.63□□□□□ -0.07
RAB39B-201ENST00000369454 FCHSD2O94868 740 aa14.63□□□□□ -0.07
RAB39B-201ENST00000369454 CEBPAP49715 358 aaPredicted RBP14.63□□□□□ -0.07
RAB39B-201ENST00000369454 TSPYL6Q8N831 410 aa14.63□□□□□ -0.07
RAB39B-201ENST00000369454 NLRP1Q9C000 1473 aa14.63□□□□□ -0.07
RAB39B-201ENST00000369454 COG3Q96JB2 828 aa14.62□□□□□ -0.07
RAB39B-201ENST00000369454 CLTCQ00610 1675 aaKnown RBP14.62□□□□□ -0.07
RAB39B-201ENST00000369454 PPIP5K1Q6PFW1 1433 aa14.62□□□□□ -0.07
RAB39B-201ENST00000369454 FRAT2O75474 233 aaPredicted RBP14.62□□□□□ -0.07
RAB39B-201ENST00000369454 SLC26A8Q96RN1 970 aa14.62□□□□□ -0.07
RAB39B-201ENST00000369454 PNNQ9H307 717 aaKnown RBP14.62□□□□□ -0.07
RAB39B-201ENST00000369454 COL3A1P02461 1466 aaPredicted RBP14.61□□□□□ -0.07
RAB39B-201ENST00000369454 UPF2Q9HAU5 1272 aaKnown RBP14.61□□□□□ -0.07
RAB39B-201ENST00000369454 DDX19BQ9UMR2 479 aa14.61□□□□□ -0.07
RAB39B-201ENST00000369454 MFAP1P55081 439 aaKnown RBP14.61□□□□□ -0.07
RAB39B-201ENST00000369454 ZMYM3Q14202 1370 aa14.6□□□□□ -0.07
RAB39B-201ENST00000369454 LNPKQ9C0E8 428 aa14.6□□□□□ -0.07
RAB39B-201ENST00000369454 CCDC61Q9Y6R9 512 aa14.6□□□□□ -0.07
RAB39B-201ENST00000369454 NFE2L2Q16236 605 aa14.59□□□□□ -0.07
RAB39B-201ENST00000369454 AEBP1Q8IUX7 1158 aa14.59□□□□□ -0.07
RAB39B-201ENST00000369454 RIMBP3CA6NJZ7 1639 aa14.58□□□□□ -0.07
RAB39B-201ENST00000369454 RIMBP3BA6NNM3 1639 aa14.58□□□□□ -0.07
RAB39B-201ENST00000369454 RIMBP3Q9UFD9 1639 aa14.58□□□□□ -0.07
RAB39B-201ENST00000369454 DIP2BQ9P265 1576 aa14.58□□□□□ -0.08
RAB39B-201ENST00000369454 IPO8O15397 1037 aaKnown RBP14.58□□□□□ -0.08
RAB39B-201ENST00000369454 USP35Q9P2H5 1018 aa14.58□□□□□ -0.08
RAB39B-201ENST00000369454 ADGRB2O60241 1585 aa14.57□□□□□ -0.08
RAB39B-201ENST00000369454 CT47B1P0C2W7 299 aaPredicted RBP14.57□□□□□ -0.08
RAB39B-201ENST00000369454 IL13P35225 146 aa14.57□□□□□ -0.08
RAB39B-201ENST00000369454 PNPLA6Q8IY17 1366 aa14.57□□□□□ -0.08
RAB39B-201ENST00000369454 RTN4Q9NQC3 1192 aaKnown RBP14.57□□□□□ -0.08
RAB39B-201ENST00000369454 MBIPQ9NS73 344 aa14.57□□□□□ -0.08
RAB39B-201ENST00000369454 LRRC7Q96NW7 1537 aa14.57□□□□□ -0.08
RAB39B-201ENST00000369454 KIF16BQ96L93 1317 aa14.57□□□□□ -0.08
RAB39B-201ENST00000369454 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.57□□□□□ -0.08
RAB39B-201ENST00000369454 KRT24Q2M2I5 525 aa14.56□□□□□ -0.08
RAB39B-201ENST00000369454 PRR36Q9H6K5 1346 aa14.56□□□□□ -0.08
RAB39B-201ENST00000369454 SULT6B1Q6IMI4 303 aa14.56□□□□□ -0.08
RAB39B-201ENST00000369454 C8orf58Q8NAV2 365 aa14.55□□□□□ -0.08
RAB39B-201ENST00000369454 IL16Q14005 1332 aa14.55□□□□□ -0.08
RAB39B-201ENST00000369454 AAMPQ13685 434 aa14.55□□□□□ -0.08
RAB39B-201ENST00000369454 ZBTB40Q9NUA8 1239 aa14.55□□□□□ -0.08
RAB39B-201ENST00000369454 VAMP4O75379 141 aa14.55□□□□□ -0.08
RAB39B-201ENST00000369454 BECN1Q14457 450 aa14.54□□□□□ -0.08
RAB39B-201ENST00000369454 PPP6R1Q9UPN7 881 aa14.54□□□□□ -0.08
RAB39B-201ENST00000369454 LTKP29376 864 aa14.54□□□□□ -0.08
RAB39B-201ENST00000369454 TWISTNBQ3B726 338 aaPredicted RBP14.54□□□□□ -0.08
RAB39B-201ENST00000369454 ANKRD45Q5TZF3 282 aa14.54□□□□□ -0.08
RAB39B-201ENST00000369454 MCM10Q7L590 875 aa14.53□□□□□ -0.08
RAB39B-201ENST00000369454 PLEKHG5O94827 1062 aa14.53□□□□□ -0.08
RAB39B-201ENST00000369454 HDGFP51858 240 aaKnown RBP14.53□□□□□ -0.08
RAB39B-201ENST00000369454 HSP90AB2PQ58FF8 381 aa14.53□□□□□ -0.08
RAB39B-201ENST00000369454 GNAI1P63096 354 aa14.53□□□□□ -0.08
RAB39B-201ENST00000369454 IL27Q8NEV9 243 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms