RNA–Protein interactions for RNA: ENST00000369448.3

FAM46C-201, Transcript of Putative nucleotidyltransferase FAM46C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM46C, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM46C-201ENST00000369448 GNAI2P04899 355 aa17.99■□□□□ 0.47
FAM46C-201ENST00000369448 THUMPD2Q9BTF0 503 aaKnown RBP17.99■□□□□ 0.47
FAM46C-201ENST00000369448 CHMP4CQ96CF2 233 aa17.99■□□□□ 0.47
FAM46C-201ENST00000369448 PLB1Q6P1J6 1458 aa17.99■□□□□ 0.47
FAM46C-201ENST00000369448 MAP7D2Q96T17 732 aa17.98■□□□□ 0.47
FAM46C-201ENST00000369448 CNTROBQ8N137 903 aa17.98■□□□□ 0.47
FAM46C-201ENST00000369448 RASSF8Q8NHQ8 419 aa17.98■□□□□ 0.47
FAM46C-201ENST00000369448 IFT140Q96RY7 1462 aa17.98■□□□□ 0.47
FAM46C-201ENST00000369448 DDX58O95786 925 aaKnown RBP17.98■□□□□ 0.47
FAM46C-201ENST00000369448 CCDC30Q5VVM6 783 aa17.98■□□□□ 0.47
FAM46C-201ENST00000369448 CLASRPQ8N2M8 674 aaKnown RBP17.97■□□□□ 0.47
FAM46C-201ENST00000369448 PEG3Q9GZU2 1588 aa17.97■□□□□ 0.47
FAM46C-201ENST00000369448 CC2D2AQ9P2K1 1620 aa17.97■□□□□ 0.47
FAM46C-201ENST00000369448 MRC2Q9UBG0 1479 aa17.97■□□□□ 0.47
FAM46C-201ENST00000369448 FCHSD2O94868 740 aa17.97■□□□□ 0.47
FAM46C-201ENST00000369448 CPLX1O14810 134 aa17.96■□□□□ 0.47
FAM46C-201ENST00000369448 AIMP1Q12904 312 aaKnown RBP17.96■□□□□ 0.47
FAM46C-201ENST00000369448 HOMER1Q86YM7 354 aa17.96■□□□□ 0.47
FAM46C-201ENST00000369448 CCDC141Q6ZP82 1450 aa17.96■□□□□ 0.47
FAM46C-201ENST00000369448 CYB5RLQ6IPT4 315 aa17.96■□□□□ 0.47
FAM46C-201ENST00000369448 NLRP6P59044 892 aa17.96■□□□□ 0.47
FAM46C-201ENST00000369448 CCDC73Q6ZRK6 1079 aa17.96■□□□□ 0.47
FAM46C-201ENST00000369448 CUL7Q14999 1698 aa17.95■□□□□ 0.46
FAM46C-201ENST00000369448 GOLGA6L1Q8N7Z2 621 aa17.95■□□□□ 0.46
FAM46C-201ENST00000369448 MAGI1Q96QZ7 1491 aaPredicted RBP17.95■□□□□ 0.46
FAM46C-201ENST00000369448 TPM3P06753 285 aa17.95■□□□□ 0.46
FAM46C-201ENST00000369448 MTERF4Q7Z6M4 381 aaKnown RBP17.95■□□□□ 0.46
FAM46C-201ENST00000369448 TTC5Q8N0Z6 440 aa17.94■□□□□ 0.46
FAM46C-201ENST00000369448 ZNF428Q96B54 188 aa17.94■□□□□ 0.46
FAM46C-201ENST00000369448 CPLX2Q6PUV4 134 aaKnown RBP17.94■□□□□ 0.46
FAM46C-201ENST00000369448 TRIM5Q9C035 493 aa17.94■□□□□ 0.46
FAM46C-201ENST00000369448 LRRCC1Q9C099 1032 aa17.94■□□□□ 0.46
FAM46C-201ENST00000369448 TRIM27P14373 513 aa17.94■□□□□ 0.46
FAM46C-201ENST00000369448 TXNDC2Q86VQ3 553 aa17.94■□□□□ 0.46
FAM46C-201ENST00000369448 PES1O00541 588 aaKnown RBP17.93■□□□□ 0.46
FAM46C-201ENST00000369448 LETM1O95202 739 aaPredicted RBP17.93■□□□□ 0.46
FAM46C-201ENST00000369448 TBC1D32Q96NH3 1257 aa17.93■□□□□ 0.46
FAM46C-201ENST00000369448 NFE2L2Q16236 605 aa17.93■□□□□ 0.46
FAM46C-201ENST00000369448 RRS1Q15050 365 aaKnown RBP17.92■□□□□ 0.46
FAM46C-201ENST00000369448 SPC24Q8NBT2 197 aa17.92■□□□□ 0.46
FAM46C-201ENST00000369448 GAS2L2Q8NHY3 880 aa17.92■□□□□ 0.46
FAM46C-201ENST00000369448 TNPO1Q92973 898 aaKnown RBP17.92■□□□□ 0.46
FAM46C-201ENST00000369448 FSD1Q9BTV5 496 aa17.92■□□□□ 0.46
FAM46C-201ENST00000369448 TPD52L1Q16890 204 aaPredicted RBP17.92■□□□□ 0.46
FAM46C-201ENST00000369448 C8orf34Q49A92 452 aa17.92■□□□□ 0.46
FAM46C-201ENST00000369448 CCT4P50991 539 aaKnown RBP17.92■□□□□ 0.46
FAM46C-201ENST00000369448 MAP4K4O95819 1239 aaPredicted RBP17.91■□□□□ 0.46
FAM46C-201ENST00000369448 PSMA5P28066 241 aa17.91■□□□□ 0.46
FAM46C-201ENST00000369448 ADGRF5Q8IZF2 1346 aa17.91■□□□□ 0.46
FAM46C-201ENST00000369448 RIC3Q7Z5B4 369 aa17.91■□□□□ 0.46
FAM46C-201ENST00000369448 ZSCAN30Q86W11 494 aa17.91■□□□□ 0.46
FAM46C-201ENST00000369448 RPAP2Q8IXW5 612 aaPredicted RBP17.91■□□□□ 0.46
FAM46C-201ENST00000369448 WDR33Q9C0J8 1336 aaKnown RBP17.91■□□□□ 0.46
FAM46C-201ENST00000369448 PSME1Q06323 249 aa17.91■□□□□ 0.46
FAM46C-201ENST00000369448 APPP05067 770 aa17.91■□□□□ 0.46
FAM46C-201ENST00000369448 LRRFIP1Q32MZ4 808 aaKnown RBP17.91■□□□□ 0.46
FAM46C-201ENST00000369448 SSFA2P28290 1259 aa17.9■□□□□ 0.46
FAM46C-201ENST00000369448 GPRASP1Q5JY77 1395 aa17.9■□□□□ 0.46
FAM46C-201ENST00000369448 NEUROD6Q96NK8 337 aa17.9■□□□□ 0.46
FAM46C-201ENST00000369448 SDF4Q9BRK5 362 aa17.9■□□□□ 0.46
FAM46C-201ENST00000369448 PCDHB15Q9Y5E8 787 aa17.9■□□□□ 0.46
FAM46C-201ENST00000369448 HMGN5P82970 282 aaKnown RBP17.9■□□□□ 0.46
FAM46C-201ENST00000369448 SYCE3A1L190 88 aa17.89■□□□□ 0.45
FAM46C-201ENST00000369448 TRIM29Q14134 588 aa17.89■□□□□ 0.45
FAM46C-201ENST00000369448 HDGFL1Q5TGJ6 251 aa17.89■□□□□ 0.45
FAM46C-201ENST00000369448 SYNE3Q6ZMZ3 975 aa17.89■□□□□ 0.45
FAM46C-201ENST00000369448 OSCARQ8IYS5 282 aa17.89■□□□□ 0.45
FAM46C-201ENST00000369448 SMARCA5O60264 1052 aaPredicted RBP17.88■□□□□ 0.45
FAM46C-201ENST00000369448 PRKCSHP14314 528 aaPredicted RBP17.88■□□□□ 0.45
FAM46C-201ENST00000369448 PDCP20941 246 aa17.88■□□□□ 0.45
FAM46C-201ENST00000369448 IL1RAPL2Q9NP60 686 aa17.88■□□□□ 0.45
FAM46C-201ENST00000369448 RRP9O43818 475 aaKnown RBP17.88■□□□□ 0.45
FAM46C-201ENST00000369448 EXOC6BQ9Y2D4 811 aa17.88■□□□□ 0.45
FAM46C-201ENST00000369448 UQCRHLA0A096LP55 91 aa17.88■□□□□ 0.45
FAM46C-201ENST00000369448 UQCRHP07919 91 aa17.88■□□□□ 0.45
FAM46C-201ENST00000369448 AKAP17AQ02040 695 aaKnown RBP17.88■□□□□ 0.45
FAM46C-201ENST00000369448 DCTN1Q14203 1278 aa17.88■□□□□ 0.45
FAM46C-201ENST00000369448 THOC2Q8NI27 1593 aaKnown RBP17.88■□□□□ 0.45
FAM46C-201ENST00000369448 RPGRIP1LQ68CZ1 1315 aa17.88■□□□□ 0.45
FAM46C-201ENST00000369448 PARD3Q8TEW0 1356 aa17.87■□□□□ 0.45
FAM46C-201ENST00000369448 SLC52A1Q9NWF4 448 aa17.87■□□□□ 0.45
FAM46C-201ENST00000369448 ATAD2Q6PL18 1390 aa17.87■□□□□ 0.45
FAM46C-201ENST00000369448 TRDNQ13061 729 aa17.87■□□□□ 0.45
FAM46C-201ENST00000369448 ALDH1L2Q3SY69 923 aa17.87■□□□□ 0.45
FAM46C-201ENST00000369448 CEBPZQ03701 1054 aaKnown RBP17.86■□□□□ 0.45
FAM46C-201ENST00000369448 DNAJC5BQ9UF47 199 aa17.86■□□□□ 0.45
FAM46C-201ENST00000369448 CYP46A1Q9Y6A2 500 aa17.86■□□□□ 0.45
FAM46C-201ENST00000369448 UGGT2Q9NYU1 1516 aa17.86■□□□□ 0.45
FAM46C-201ENST00000369448 UPF3BQ9BZI7 483 aaKnown RBP17.85■□□□□ 0.45
FAM46C-201ENST00000369448 DHX29Q7Z478 1369 aaKnown RBP17.85■□□□□ 0.45
FAM46C-201ENST00000369448 NOC3LQ8WTT2 800 aaKnown RBP17.85■□□□□ 0.45
FAM46C-201ENST00000369448 TPM1P09493 284 aa17.85■□□□□ 0.45
FAM46C-201ENST00000369448 FAM69CQ0P6D2 419 aa17.85■□□□□ 0.45
FAM46C-201ENST00000369448 RALGAPBQ86X10 1494 aa17.85■□□□□ 0.45
FAM46C-201ENST00000369448 MIS18AQ9NYP9 233 aa17.85■□□□□ 0.45
FAM46C-201ENST00000369448 TSR1Q2NL82 804 aaKnown RBP17.84■□□□□ 0.45
FAM46C-201ENST00000369448 CCDC192P0DO97 292 aa17.84■□□□□ 0.45
FAM46C-201ENST00000369448 PKNOX2Q96KN3 472 aa17.84■□□□□ 0.45
FAM46C-201ENST00000369448 SRCIN1Q9C0H9 1055 aa17.84■□□□□ 0.45
FAM46C-201ENST00000369448 FMNL2Q96PY5 1086 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms