RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 PMFBP1Q8TBY8 1022 aa22.47■■□□□ 1.19
PHGDH-202ENST00000369409 GTF3C3Q9Y5Q9 886 aa22.46■■□□□ 1.19
PHGDH-202ENST00000369409 C14orf37Q86TY3 774 aa22.45■■□□□ 1.19
PHGDH-202ENST00000369409 PROSER2Q86WR7 435 aaPredicted RBP22.43■■□□□ 1.18
PHGDH-202ENST00000369409 TTC21BQ7Z4L5 1316 aa22.43■■□□□ 1.18
PHGDH-202ENST00000369409 CFAP53Q96M91 514 aa22.43■■□□□ 1.18
PHGDH-202ENST00000369409 SSH2Q76I76 1423 aa22.42■■□□□ 1.18
PHGDH-202ENST00000369409 NGDNQ8NEJ9 315 aaKnown RBP22.42■■□□□ 1.18
PHGDH-202ENST00000369409 ZRANB1Q9UGI0 708 aa22.42■■□□□ 1.18
PHGDH-202ENST00000369409 COL3A1P02461 1466 aaPredicted RBP22.42■■□□□ 1.18
PHGDH-202ENST00000369409 PIK3C2AO00443 1686 aa22.41■■□□□ 1.18
PHGDH-202ENST00000369409 COG3Q96JB2 828 aa22.39■■□□□ 1.18
PHGDH-202ENST00000369409 OVOS2A0A0J9YW53 1432 aa22.39■■□□□ 1.17
PHGDH-202ENST00000369409 OVOS2Q6IE36 1432 aa22.39■■□□□ 1.17
PHGDH-202ENST00000369409 XIRP1Q702N8 1843 aaKnown RBP22.38■■□□□ 1.17
PHGDH-202ENST00000369409 SALL2Q9Y467 1007 aaPredicted RBP22.37■■□□□ 1.17
PHGDH-202ENST00000369409 TMEM94Q12767 1356 aa22.37■■□□□ 1.17
PHGDH-202ENST00000369409 TTC21AQ8NDW8 1320 aa22.36■■□□□ 1.17
PHGDH-202ENST00000369409 PHF8Q9UPP1 1060 aa22.36■■□□□ 1.17
PHGDH-202ENST00000369409 SMG6Q86US8 1419 aaKnown RBP22.35■■□□□ 1.17
PHGDH-202ENST00000369409 FBLN1P23142 703 aa22.35■■□□□ 1.17
PHGDH-202ENST00000369409 CCDC146Q8IYE0 955 aa22.35■■□□□ 1.17
PHGDH-202ENST00000369409 MARF1Q9Y4F3 1742 aaKnown RBP22.35■■□□□ 1.17
PHGDH-202ENST00000369409 AATKQ6ZMQ8 1374 aa22.35■■□□□ 1.17
PHGDH-202ENST00000369409 USP54Q70EL1 1684 aa22.35■■□□□ 1.17
PHGDH-202ENST00000369409 POLKQ9UBT6 870 aa22.33■■□□□ 1.17
PHGDH-202ENST00000369409 CDK12Q9NYV4 1490 aaPredicted RBP22.33■■□□□ 1.17
PHGDH-202ENST00000369409 KIF1AQ12756 1690 aa22.33■■□□□ 1.17
PHGDH-202ENST00000369409 PNPLA6Q8IY17 1366 aa22.32■■□□□ 1.16
PHGDH-202ENST00000369409 ESCO1Q5FWF5 840 aa22.32■■□□□ 1.16
PHGDH-202ENST00000369409 NCOA3Q9Y6Q9 1424 aa22.32■■□□□ 1.16
PHGDH-202ENST00000369409 DCCP43146 1447 aa22.31■■□□□ 1.16
PHGDH-202ENST00000369409 C19orf44Q9H6X5 657 aa22.31■■□□□ 1.16
PHGDH-202ENST00000369409 PPM1GO15355 546 aaPredicted RBP22.3■■□□□ 1.16
PHGDH-202ENST00000369409 EMILIN1Q9Y6C2 1016 aa22.3■■□□□ 1.16
PHGDH-202ENST00000369409 C1orf167Q5SNV9 1468 aa22.3■■□□□ 1.16
PHGDH-202ENST00000369409 USP31Q70CQ4 1352 aa22.28■■□□□ 1.16
PHGDH-202ENST00000369409 PEAK1Q9H792 1746 aa22.28■■□□□ 1.16
PHGDH-202ENST00000369409 IQSEC2Q5JU85 1478 aa22.28■■□□□ 1.16
PHGDH-202ENST00000369409 RRS1Q15050 365 aaKnown RBP22.28■■□□□ 1.16
PHGDH-202ENST00000369409 MST1RQ04912 1400 aa22.27■■□□□ 1.16
PHGDH-202ENST00000369409 U2AF1L5P0DN76 240 aaPredicted RBP22.27■■□□□ 1.16
PHGDH-202ENST00000369409 U2AF1Q01081 240 aaKnown RBP eCLIP22.27■■□□□ 1.16
PHGDH-202ENST00000369409 ORAI2Q96SN7 254 aa22.27■■□□□ 1.16
PHGDH-202ENST00000369409 NUDCQ9Y266 331 aa22.27■■□□□ 1.16
PHGDH-202ENST00000369409 LRRC7Q96NW7 1537 aa22.26■■□□□ 1.15
PHGDH-202ENST00000369409 DIAPH1O60610 1272 aaKnown RBP22.26■■□□□ 1.15
PHGDH-202ENST00000369409 APAF1O14727 1248 aa22.26■■□□□ 1.15
PHGDH-202ENST00000369409 U2SURPO15042 1029 aaKnown RBP22.26■■□□□ 1.15
PHGDH-202ENST00000369409 ZNF335Q9H4Z2 1342 aaPredicted RBP22.25■■□□□ 1.15
PHGDH-202ENST00000369409 TRPM3Q9HCF6 1732 aaPredicted RBP22.25■■□□□ 1.15
PHGDH-202ENST00000369409 ATF3P18847 181 aa22.25■■□□□ 1.15
PHGDH-202ENST00000369409 PAK3O75914 559 aaPredicted RBP22.24■■□□□ 1.15
PHGDH-202ENST00000369409 MSH6P52701 1360 aa22.24■■□□□ 1.15
PHGDH-202ENST00000369409 PDE3BQ13370 1112 aa22.24■■□□□ 1.15
PHGDH-202ENST00000369409 SOX12O15370 315 aa22.23■■□□□ 1.15
PHGDH-202ENST00000369409 RUNDC1Q96C34 613 aa22.23■■□□□ 1.15
PHGDH-202ENST00000369409 NLRP6P59044 892 aa22.22■■□□□ 1.15
PHGDH-202ENST00000369409 PSME1Q06323 249 aa22.22■■□□□ 1.15
PHGDH-202ENST00000369409 NUTM2GQ5VZR2 741 aa22.21■■□□□ 1.15
PHGDH-202ENST00000369409 ABTB2Q8N961 1025 aa22.21■■□□□ 1.15
PHGDH-202ENST00000369409 SUPT16HQ9Y5B9 1047 aaKnown RBP22.21■■□□□ 1.15
PHGDH-202ENST00000369409 CDCA7LQ96GN5 454 aa22.2■■□□□ 1.14
PHGDH-202ENST00000369409 ZNF521Q96K83 1311 aa22.2■■□□□ 1.14
PHGDH-202ENST00000369409 LTN1O94822 1766 aa22.2■■□□□ 1.14
PHGDH-202ENST00000369409 FOXO3O43524 673 aa22.2■■□□□ 1.14
PHGDH-202ENST00000369409 CADPS2Q86UW7 1296 aa22.19■■□□□ 1.14
PHGDH-202ENST00000369409 XPCQ01831 940 aaPredicted RBP22.17■■□□□ 1.14
PHGDH-202ENST00000369409 TCP11L2Q8N4U5 519 aa22.17■■□□□ 1.14
PHGDH-202ENST00000369409 MAP3K19Q56UN5 1328 aa22.16■■□□□ 1.14
PHGDH-202ENST00000369409 NEFLP07196 543 aa22.16■■□□□ 1.14
PHGDH-202ENST00000369409 IL13P35225 146 aa22.16■■□□□ 1.14
PHGDH-202ENST00000369409 NGEFQ8N5V2 710 aa22.16■■□□□ 1.14
PHGDH-202ENST00000369409 ALS2Q96Q42 1657 aa22.16■■□□□ 1.14
PHGDH-202ENST00000369409 RRP7AQ9Y3A4 280 aaKnown RBP22.15■■□□□ 1.14
PHGDH-202ENST00000369409 RGPD1P0DJD0 1748 aa22.15■■□□□ 1.14
PHGDH-202ENST00000369409 DMRT2Q9Y5R5 561 aa22.15■■□□□ 1.14
PHGDH-202ENST00000369409 SBNO1A3KN83 1393 aa22.14■■□□□ 1.14
PHGDH-202ENST00000369409 NFAT5O94916 1531 aa22.14■■□□□ 1.14
PHGDH-202ENST00000369409 PLEKHF1Q96S99 279 aa22.14■■□□□ 1.13
PHGDH-202ENST00000369409 NEUROD2Q15784 382 aa22.13■■□□□ 1.13
PHGDH-202ENST00000369409 FLT4P35916 1363 aa22.13■■□□□ 1.13
PHGDH-202ENST00000369409 MAPK8IP3Q9UPT6 1336 aa22.13■■□□□ 1.13
PHGDH-202ENST00000369409 GOLGA2Q08379 1002 aa22.13■■□□□ 1.13
PHGDH-202ENST00000369409 FKBP8Q14318 412 aa22.12■■□□□ 1.13
PHGDH-202ENST00000369409 KRT28Q7Z3Y7 464 aa22.12■■□□□ 1.13
PHGDH-202ENST00000369409 RSPH6AQ9H0K4 717 aa22.11■■□□□ 1.13
PHGDH-202ENST00000369409 SLIT3O75094 1523 aa22.11■■□□□ 1.13
PHGDH-202ENST00000369409 HMOX1P09601 288 aa22.11■■□□□ 1.13
PHGDH-202ENST00000369409 EIF4A2Q14240 407 aaKnown RBP22.11■■□□□ 1.13
PHGDH-202ENST00000369409 HSP90AB2PQ58FF8 381 aa22.11■■□□□ 1.13
PHGDH-202ENST00000369409 FCHSD2O94868 740 aa22.1■■□□□ 1.13
PHGDH-202ENST00000369409 WWC1Q8IX03 1113 aa22.1■■□□□ 1.13
PHGDH-202ENST00000369409 PNNQ9H307 717 aaKnown RBP22.1■■□□□ 1.13
PHGDH-202ENST00000369409 PRKAR2BP31323 418 aa22.09■■□□□ 1.13
PHGDH-202ENST00000369409 PHRF1Q9P1Y6 1649 aaKnown RBP22.09■■□□□ 1.13
PHGDH-202ENST00000369409 AMPHP49418 695 aa22.09■■□□□ 1.13
PHGDH-202ENST00000369409 DDX17Q92841 729 aaKnown RBP22.08■■□□□ 1.13
PHGDH-202ENST00000369409 KIF24Q5T7B8 1368 aa22.08■■□□□ 1.12
PHGDH-202ENST00000369409 LMOD2Q6P5Q4 547 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms