RNA–Protein interactions for RNA: ENST00000368935.1

PRUNE1-203, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 1 (best) BASIC

Gene PRUNE1, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-203ENST00000368935 FTSJ3Q8IY81 847 aaKnown RBP12.7□□□□□ -0.38
PRUNE1-203ENST00000368935 OSCARQ8IYS5 282 aa12.7□□□□□ -0.38
PRUNE1-203ENST00000368935 IL27Q8NEV9 243 aa12.7□□□□□ -0.38
PRUNE1-203ENST00000368935 FRAT2O75474 233 aaPredicted RBP12.7□□□□□ -0.38
PRUNE1-203ENST00000368935 PLEKHF1Q96S99 279 aa12.7□□□□□ -0.38
PRUNE1-203ENST00000368935 YTHDC2Q9H6S0 1430 aaKnown RBP12.69□□□□□ -0.38
PRUNE1-203ENST00000368935 BECN1Q14457 450 aa12.69□□□□□ -0.38
PRUNE1-203ENST00000368935 DZIP1LQ8IYY4 767 aaKnown RBP12.69□□□□□ -0.38
PRUNE1-203ENST00000368935 TMPOP42166 694 aaKnown RBP12.69□□□□□ -0.38
PRUNE1-203ENST00000368935 SMC4Q9NTJ3 1288 aa12.69□□□□□ -0.38
PRUNE1-203ENST00000368935 TERF2IPQ9NYB0 399 aa12.69□□□□□ -0.38
PRUNE1-203ENST00000368935 MINK1Q8N4C8 1332 aaPredicted RBP12.68□□□□□ -0.38
PRUNE1-203ENST00000368935 EXOSC9Q06265 439 aaKnown RBP12.68□□□□□ -0.38
PRUNE1-203ENST00000368935 UPF2Q9HAU5 1272 aaKnown RBP12.68□□□□□ -0.38
PRUNE1-203ENST00000368935 PRAM1Q96QH2 718 aa12.68□□□□□ -0.38
PRUNE1-203ENST00000368935 TRIM35Q9UPQ4 493 aa12.68□□□□□ -0.38
PRUNE1-203ENST00000368935 CDC42BPGQ6DT37 1551 aa12.67□□□□□ -0.38
PRUNE1-203ENST00000368935 ALKQ9UM73 1620 aa12.67□□□□□ -0.38
PRUNE1-203ENST00000368935 FYB1O15117 783 aa12.67□□□□□ -0.38
PRUNE1-203ENST00000368935 LRRC7Q96NW7 1537 aa12.67□□□□□ -0.38
PRUNE1-203ENST00000368935 TRIM27P14373 513 aa12.66□□□□□ -0.38
PRUNE1-203ENST00000368935 TBC1D32Q96NH3 1257 aa12.66□□□□□ -0.38
PRUNE1-203ENST00000368935 IL16Q14005 1332 aa12.66□□□□□ -0.38
PRUNE1-203ENST00000368935 POGKQ9P215 609 aa12.66□□□□□ -0.38
PRUNE1-203ENST00000368935 ARHGEF40Q8TER5 1519 aa12.65□□□□□ -0.38
PRUNE1-203ENST00000368935 SSH1Q8WYL5 1049 aa12.65□□□□□ -0.38
PRUNE1-203ENST00000368935 ATF7IPQ6VMQ6 1270 aa12.64□□□□□ -0.39
PRUNE1-203ENST00000368935 HDGFL2Q7Z4V5 671 aaPredicted RBP12.64□□□□□ -0.39
PRUNE1-203ENST00000368935 ITPRIPQ8IWB1 547 aa12.64□□□□□ -0.39
PRUNE1-203ENST00000368935 DDX19BQ9UMR2 479 aa12.64□□□□□ -0.39
PRUNE1-203ENST00000368935 PNPLA6Q8IY17 1366 aa12.64□□□□□ -0.39
PRUNE1-203ENST00000368935 DIAPH1O60610 1272 aaKnown RBP12.64□□□□□ -0.39
PRUNE1-203ENST00000368935 RIPK4P57078 832 aa12.63□□□□□ -0.39
PRUNE1-203ENST00000368935 HDAC1Q13547 482 aaPredicted RBP12.63□□□□□ -0.39
PRUNE1-203ENST00000368935 SLKQ9H2G2 1235 aaPredicted RBP12.63□□□□□ -0.39
PRUNE1-203ENST00000368935 KIF16BQ96L93 1317 aa12.63□□□□□ -0.39
PRUNE1-203ENST00000368935 BRPF3Q9ULD4 1205 aa12.62□□□□□ -0.39
PRUNE1-203ENST00000368935 SETD1AO15047 1707 aaKnown RBP12.62□□□□□ -0.39
PRUNE1-203ENST00000368935 MAP2P11137 1827 aaKnown RBP12.62□□□□□ -0.39
PRUNE1-203ENST00000368935 CDK19Q9BWU1 502 aa12.62□□□□□ -0.39
PRUNE1-203ENST00000368935 PNNQ9H307 717 aaKnown RBP12.62□□□□□ -0.39
PRUNE1-203ENST00000368935 RTN4Q9NQC3 1192 aaKnown RBP12.62□□□□□ -0.39
PRUNE1-203ENST00000368935 RIMBP3CA6NJZ7 1639 aa12.62□□□□□ -0.39
PRUNE1-203ENST00000368935 RIMBP3BA6NNM3 1639 aa12.62□□□□□ -0.39
PRUNE1-203ENST00000368935 RIMBP3Q9UFD9 1639 aa12.62□□□□□ -0.39
PRUNE1-203ENST00000368935 DLC1Q96QB1 1528 aa12.61□□□□□ -0.39
PRUNE1-203ENST00000368935 FAM135BQ49AJ0 1406 aa12.61□□□□□ -0.39
PRUNE1-203ENST00000368935 NOB1Q9ULX3 412 aaKnown RBP12.61□□□□□ -0.39
PRUNE1-203ENST00000368935 ATP7BP35670 1465 aa12.61□□□□□ -0.39
PRUNE1-203ENST00000368935 TBC1D2Q9BYX2 928 aa12.61□□□□□ -0.39
PRUNE1-203ENST00000368935 ANTXR1Q9H6X2 564 aa12.61□□□□□ -0.39
PRUNE1-203ENST00000368935 FBXO31Q5XUX0 539 aaPredicted RBP12.6□□□□□ -0.39
PRUNE1-203ENST00000368935 TMEM57Q8N5G2 664 aa12.6□□□□□ -0.39
PRUNE1-203ENST00000368935 CABP1Q9NZU7 370 aa12.6□□□□□ -0.39
PRUNE1-203ENST00000368935 SMC5Q8IY18 1101 aa12.59□□□□□ -0.39
PRUNE1-203ENST00000368935 IPO8O15397 1037 aaKnown RBP12.58□□□□□ -0.39
PRUNE1-203ENST00000368935 FCHSD2O94868 740 aa12.58□□□□□ -0.39
PRUNE1-203ENST00000368935 ZBTB40Q9NUA8 1239 aa12.58□□□□□ -0.39
PRUNE1-203ENST00000368935 PPIP5K1Q6PFW1 1433 aa12.58□□□□□ -0.4
PRUNE1-203ENST00000368935 PRKAR2BP31323 418 aa12.58□□□□□ -0.4
PRUNE1-203ENST00000368935 ALDH1L2Q3SY69 923 aa12.58□□□□□ -0.4
PRUNE1-203ENST00000368935 RSPH6AQ9H0K4 717 aa12.58□□□□□ -0.4
PRUNE1-203ENST00000368935 STAG3Q9UJ98 1225 aa12.58□□□□□ -0.4
PRUNE1-203ENST00000368935 MFAP1P55081 439 aaKnown RBP12.57□□□□□ -0.4
PRUNE1-203ENST00000368935 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.57□□□□□ -0.4
PRUNE1-203ENST00000368935 REREQ9P2R6 1566 aa12.57□□□□□ -0.4
PRUNE1-203ENST00000368935 A2ML1A8K2U0 1454 aa12.57□□□□□ -0.4
PRUNE1-203ENST00000368935 C22orf23Q9BZE7 217 aa12.57□□□□□ -0.4
PRUNE1-203ENST00000368935 DLG5Q8TDM6 1919 aa12.56□□□□□ -0.4
PRUNE1-203ENST00000368935 SPATA31D1Q6ZQQ2 1576 aa12.56□□□□□ -0.4
PRUNE1-203ENST00000368935 POLKQ9UBT6 870 aa12.56□□□□□ -0.4
PRUNE1-203ENST00000368935 CDK12Q9NYV4 1490 aaPredicted RBP12.55□□□□□ -0.4
PRUNE1-203ENST00000368935 ZNF428Q96B54 188 aa12.55□□□□□ -0.4
PRUNE1-203ENST00000368935 NRXN3Q9Y4C0 1643 aa12.55□□□□□ -0.4
PRUNE1-203ENST00000368935 AGLP35573 1532 aa12.55□□□□□ -0.4
PRUNE1-203ENST00000368935 RIMS2Q9UQ26 1411 aa12.55□□□□□ -0.4
PRUNE1-203ENST00000368935 MON2Q7Z3U7 1717 aa12.55□□□□□ -0.4
PRUNE1-203ENST00000368935 PTCH1Q13635 1447 aa12.54□□□□□ -0.4
PRUNE1-203ENST00000368935 EDC4Q6P2E9 1401 aaKnown RBP12.54□□□□□ -0.4
PRUNE1-203ENST00000368935 FBLN1P23142 703 aa12.54□□□□□ -0.4
PRUNE1-203ENST00000368935 BRPF1P55201 1214 aaPredicted RBP12.54□□□□□ -0.4
PRUNE1-203ENST00000368935 NUCB1Q02818 461 aa12.54□□□□□ -0.4
PRUNE1-203ENST00000368935 NFE2L2Q16236 605 aa12.54□□□□□ -0.4
PRUNE1-203ENST00000368935 WAPLQ7Z5K2 1190 aa12.54□□□□□ -0.4
PRUNE1-203ENST00000368935 TSPOAP1O95153 1857 aa12.54□□□□□ -0.4
PRUNE1-203ENST00000368935 CPSF1Q10570 1443 aaKnown RBP12.53□□□□□ -0.4
PRUNE1-203ENST00000368935 DIP2BQ9P265 1576 aa12.53□□□□□ -0.4
PRUNE1-203ENST00000368935 ITSN1Q15811 1721 aa12.53□□□□□ -0.4
PRUNE1-203ENST00000368935 HMOX1P09601 288 aa12.53□□□□□ -0.4
PRUNE1-203ENST00000368935 PHACTR3Q96KR7 559 aa12.53□□□□□ -0.4
PRUNE1-203ENST00000368935 KNDC1Q76NI1 1749 aa12.52□□□□□ -0.4
PRUNE1-203ENST00000368935 PIK3R4Q99570 1358 aa12.52□□□□□ -0.4
PRUNE1-203ENST00000368935 CALD1Q05682 793 aaKnown RBP12.52□□□□□ -0.41
PRUNE1-203ENST00000368935 SPRYD3Q8NCJ5 442 aa12.52□□□□□ -0.41
PRUNE1-203ENST00000368935 AKAP12Q02952 1782 aa12.52□□□□□ -0.41
PRUNE1-203ENST00000368935 THUMPD2Q9BTF0 503 aaKnown RBP12.52□□□□□ -0.41
PRUNE1-203ENST00000368935 LNPKQ9C0E8 428 aa12.52□□□□□ -0.41
PRUNE1-203ENST00000368935 EMILIN1Q9Y6C2 1016 aa12.52□□□□□ -0.41
PRUNE1-203ENST00000368935 CHD1LQ86WJ1 897 aa12.51□□□□□ -0.41
PRUNE1-203ENST00000368935 C3P01024 1663 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms